Protein–RNA interactions for Protein: Q6V1P9

DCHS2, Protocadherin-23, humanhuman

Predictions only

Length 2,916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS2Q6V1P9 MIR7108-201ENST00000614319 87 ntBASIC24.59■■□□□ 1.53
DCHS2Q6V1P9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
DCHS2Q6V1P9 ABHD17AP4-201ENST00000411545 909 ntBASIC24.57■■□□□ 1.52
DCHS2Q6V1P9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.55■■□□□ 1.52
DCHS2Q6V1P9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC24.55■■□□□ 1.52
DCHS2Q6V1P9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
DCHS2Q6V1P9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.55■■□□□ 1.52
DCHS2Q6V1P9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.55■■□□□ 1.52
DCHS2Q6V1P9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
DCHS2Q6V1P9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DCHS2Q6V1P9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.53■■□□□ 1.52
DCHS2Q6V1P9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
DCHS2Q6V1P9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
DCHS2Q6V1P9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
DCHS2Q6V1P9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
DCHS2Q6V1P9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
DCHS2Q6V1P9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
DCHS2Q6V1P9 MIR3665-201ENST00000578708 105 ntBASIC24.47■■□□□ 1.51
DCHS2Q6V1P9 AC087741.3-201ENST00000624270 1347 ntBASIC24.46■■□□□ 1.51
DCHS2Q6V1P9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
DCHS2Q6V1P9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
DCHS2Q6V1P9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.44■■□□□ 1.5
DCHS2Q6V1P9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
DCHS2Q6V1P9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DCHS2Q6V1P9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.41■■□□□ 1.5
DCHS2Q6V1P9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DCHS2Q6V1P9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DCHS2Q6V1P9 MVK-208ENST00000539696 608 ntTSL 5 BASIC24.4■■□□□ 1.5
DCHS2Q6V1P9 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DCHS2Q6V1P9 AL133380.1-201ENST00000506013 324 ntBASIC24.4■■□□□ 1.5
DCHS2Q6V1P9 DUX4L28-201ENST00000623687 678 ntBASIC24.39■■□□□ 1.49
DCHS2Q6V1P9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC24.35■■□□□ 1.49
DCHS2Q6V1P9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.35■■□□□ 1.49
DCHS2Q6V1P9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.34■■□□□ 1.49
DCHS2Q6V1P9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.31■■□□□ 1.48
DCHS2Q6V1P9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DCHS2Q6V1P9 AC044849.2-201ENST00000606596 710 ntBASIC24.3■■□□□ 1.48
DCHS2Q6V1P9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.29■■□□□ 1.48
DCHS2Q6V1P9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.28■■□□□ 1.48
DCHS2Q6V1P9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DCHS2Q6V1P9 AC005559.1-201ENST00000589661 871 ntBASIC24.25■■□□□ 1.47
DCHS2Q6V1P9 MIR762-201ENST00000390236 83 ntBASIC24.25■■□□□ 1.47
DCHS2Q6V1P9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.25■■□□□ 1.47
DCHS2Q6V1P9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DCHS2Q6V1P9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.23■■□□□ 1.47
DCHS2Q6V1P9 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC24.23■■□□□ 1.47
DCHS2Q6V1P9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.21■■□□□ 1.47
DCHS2Q6V1P9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.2■■□□□ 1.46
DCHS2Q6V1P9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
DCHS2Q6V1P9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.17■■□□□ 1.46
DCHS2Q6V1P9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DCHS2Q6V1P9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DCHS2Q6V1P9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
DCHS2Q6V1P9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
DCHS2Q6V1P9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.14■■□□□ 1.45
DCHS2Q6V1P9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.14■■□□□ 1.45
DCHS2Q6V1P9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
DCHS2Q6V1P9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
DCHS2Q6V1P9 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
DCHS2Q6V1P9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
DCHS2Q6V1P9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.11■■□□□ 1.45
DCHS2Q6V1P9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.11■■□□□ 1.45
DCHS2Q6V1P9 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.11■■□□□ 1.45
DCHS2Q6V1P9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.1■■□□□ 1.45
DCHS2Q6V1P9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
DCHS2Q6V1P9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DCHS2Q6V1P9 MIR4449-201ENST00000578365 66 ntBASIC24.08■■□□□ 1.45
DCHS2Q6V1P9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.08■■□□□ 1.45
DCHS2Q6V1P9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DCHS2Q6V1P9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DCHS2Q6V1P9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.07■■□□□ 1.44
DCHS2Q6V1P9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.07■■□□□ 1.44
DCHS2Q6V1P9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
DCHS2Q6V1P9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC24.05■■□□□ 1.44
DCHS2Q6V1P9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
DCHS2Q6V1P9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.05■■□□□ 1.44
DCHS2Q6V1P9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.04■■□□□ 1.44
DCHS2Q6V1P9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.04■■□□□ 1.44
DCHS2Q6V1P9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
DCHS2Q6V1P9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.02■■□□□ 1.44
DCHS2Q6V1P9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
DCHS2Q6V1P9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
DCHS2Q6V1P9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DCHS2Q6V1P9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.99■■□□□ 1.43
DCHS2Q6V1P9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DCHS2Q6V1P9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
DCHS2Q6V1P9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.98■■□□□ 1.43
DCHS2Q6V1P9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
DCHS2Q6V1P9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
DCHS2Q6V1P9 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DCHS2Q6V1P9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.97■■□□□ 1.43
DCHS2Q6V1P9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DCHS2Q6V1P9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
DCHS2Q6V1P9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DCHS2Q6V1P9 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
DCHS2Q6V1P9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.95■■□□□ 1.42
DCHS2Q6V1P9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DCHS2Q6V1P9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
DCHS2Q6V1P9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DCHS2Q6V1P9 ZNRF2P2-203ENST00000454624 420 ntBASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms