Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01556Q5JQF7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.93■□□□□ 0.62
LINC01556Q5JQF7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.92■□□□□ 0.62
LINC01556Q5JQF7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01556Q5JQF7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01556Q5JQF7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01556Q5JQF7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.89■□□□□ 0.61
LINC01556Q5JQF7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.89■□□□□ 0.61
LINC01556Q5JQF7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.87■□□□□ 0.61
LINC01556Q5JQF7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LINC01556Q5JQF7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.85■□□□□ 0.61
LINC01556Q5JQF7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01556Q5JQF7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01556Q5JQF7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01556Q5JQF7 RARRES2P7-201ENST00000567349 469 ntBASIC18.83■□□□□ 0.6
LINC01556Q5JQF7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01556Q5JQF7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01556Q5JQF7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01556Q5JQF7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.81■□□□□ 0.6
LINC01556Q5JQF7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.8■□□□□ 0.6
LINC01556Q5JQF7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC01556Q5JQF7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC01556Q5JQF7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01556Q5JQF7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01556Q5JQF7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.79■□□□□ 0.6
LINC01556Q5JQF7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01556Q5JQF7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01556Q5JQF7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01556Q5JQF7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LINC01556Q5JQF7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
LINC01556Q5JQF7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.76■□□□□ 0.59
LINC01556Q5JQF7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01556Q5JQF7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.75■□□□□ 0.59
LINC01556Q5JQF7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01556Q5JQF7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01556Q5JQF7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01556Q5JQF7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01556Q5JQF7 SETD8P1-201ENST00000623146 1180 ntBASIC18.72■□□□□ 0.59
LINC01556Q5JQF7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01556Q5JQF7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01556Q5JQF7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01556Q5JQF7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.71■□□□□ 0.59
LINC01556Q5JQF7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01556Q5JQF7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01556Q5JQF7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01556Q5JQF7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01556Q5JQF7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01556Q5JQF7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01556Q5JQF7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.67■□□□□ 0.58
LINC01556Q5JQF7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LINC01556Q5JQF7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01556Q5JQF7 AL133380.1-201ENST00000506013 324 ntBASIC18.66■□□□□ 0.58
LINC01556Q5JQF7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.66■□□□□ 0.58
LINC01556Q5JQF7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LINC01556Q5JQF7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01556Q5JQF7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.61■□□□□ 0.57
LINC01556Q5JQF7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01556Q5JQF7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01556Q5JQF7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01556Q5JQF7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01556Q5JQF7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.6■□□□□ 0.57
LINC01556Q5JQF7 AC097358.2-201ENST00000607541 1159 ntBASIC18.59■□□□□ 0.57
LINC01556Q5JQF7 AC120057.4-201ENST00000624722 1615 ntBASIC18.59■□□□□ 0.57
LINC01556Q5JQF7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC01556Q5JQF7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC01556Q5JQF7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LINC01556Q5JQF7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01556Q5JQF7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LINC01556Q5JQF7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LINC01556Q5JQF7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01556Q5JQF7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01556Q5JQF7 AC136428.2-201ENST00000563187 214 ntBASIC18.56■□□□□ 0.56
LINC01556Q5JQF7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01556Q5JQF7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.55■□□□□ 0.56
LINC01556Q5JQF7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.55■□□□□ 0.56
LINC01556Q5JQF7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01556Q5JQF7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01556Q5JQF7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01556Q5JQF7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.54■□□□□ 0.56
LINC01556Q5JQF7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC01556Q5JQF7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01556Q5JQF7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LINC01556Q5JQF7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.52■□□□□ 0.56
LINC01556Q5JQF7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
LINC01556Q5JQF7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
LINC01556Q5JQF7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01556Q5JQF7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC01556Q5JQF7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LINC01556Q5JQF7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01556Q5JQF7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01556Q5JQF7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC01556Q5JQF7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
LINC01556Q5JQF7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01556Q5JQF7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LINC01556Q5JQF7 WASH5P-204ENST00000632292 975 ntBASIC18.49■□□□□ 0.55
LINC01556Q5JQF7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01556Q5JQF7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01556Q5JQF7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01556Q5JQF7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.48■□□□□ 0.55
LINC01556Q5JQF7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms