Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
LINC01556Q5JQF7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LINC01556Q5JQF7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
LINC01556Q5JQF7 AL356512.1-201ENST00000607453 1739 ntBASIC22.62■■□□□ 1.21
LINC01556Q5JQF7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LINC01556Q5JQF7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LINC01556Q5JQF7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC22.38■■□□□ 1.17
LINC01556Q5JQF7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC22.32■■□□□ 1.16
LINC01556Q5JQF7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC22.06■■□□□ 1.12
LINC01556Q5JQF7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
LINC01556Q5JQF7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC21.92■■□□□ 1.1
LINC01556Q5JQF7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
LINC01556Q5JQF7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC21.9■■□□□ 1.1
LINC01556Q5JQF7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
LINC01556Q5JQF7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINC01556Q5JQF7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC21.55■■□□□ 1.04
LINC01556Q5JQF7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LINC01556Q5JQF7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC21.43■■□□□ 1.02
LINC01556Q5JQF7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
LINC01556Q5JQF7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC21.35■■□□□ 1.01
LINC01556Q5JQF7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LINC01556Q5JQF7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LINC01556Q5JQF7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC01556Q5JQF7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC01556Q5JQF7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINC01556Q5JQF7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
LINC01556Q5JQF7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC21■□□□□ 0.95
LINC01556Q5JQF7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC20.94■□□□□ 0.94
LINC01556Q5JQF7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LINC01556Q5JQF7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01556Q5JQF7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LINC01556Q5JQF7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC01556Q5JQF7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC01556Q5JQF7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LINC01556Q5JQF7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01556Q5JQF7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LINC01556Q5JQF7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01556Q5JQF7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC01556Q5JQF7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC20.75■□□□□ 0.91
LINC01556Q5JQF7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC01556Q5JQF7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.7■□□□□ 0.9
LINC01556Q5JQF7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
LINC01556Q5JQF7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC20.67■□□□□ 0.9
LINC01556Q5JQF7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC01556Q5JQF7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LINC01556Q5JQF7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC01556Q5JQF7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.57■□□□□ 0.88
LINC01556Q5JQF7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC01556Q5JQF7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01556Q5JQF7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LINC01556Q5JQF7 AC015813.7-201ENST00000623294 581 ntBASIC20.4■□□□□ 0.86
LINC01556Q5JQF7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LINC01556Q5JQF7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC20.33■□□□□ 0.85
LINC01556Q5JQF7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC20.28■□□□□ 0.84
LINC01556Q5JQF7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC01556Q5JQF7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.27■□□□□ 0.84
LINC01556Q5JQF7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC01556Q5JQF7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01556Q5JQF7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC01556Q5JQF7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.21■□□□□ 0.83
LINC01556Q5JQF7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC20.21■□□□□ 0.83
LINC01556Q5JQF7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01556Q5JQF7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINC01556Q5JQF7 AC006077.2-201ENST00000623591 457 ntBASIC20.13■□□□□ 0.81
LINC01556Q5JQF7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC01556Q5JQF7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINC01556Q5JQF7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINC01556Q5JQF7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC01556Q5JQF7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
LINC01556Q5JQF7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LINC01556Q5JQF7 ZNRF2P1-201ENST00000441407 443 ntBASIC20.02■□□□□ 0.8
LINC01556Q5JQF7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LINC01556Q5JQF7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC01556Q5JQF7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LINC01556Q5JQF7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01556Q5JQF7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC01556Q5JQF7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC19.94■□□□□ 0.78
LINC01556Q5JQF7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01556Q5JQF7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINC01556Q5JQF7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01556Q5JQF7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LINC01556Q5JQF7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01556Q5JQF7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC19.86■□□□□ 0.77
LINC01556Q5JQF7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LINC01556Q5JQF7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LINC01556Q5JQF7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC01556Q5JQF7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC01556Q5JQF7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LINC01556Q5JQF7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LINC01556Q5JQF7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.74■□□□□ 0.75
LINC01556Q5JQF7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LINC01556Q5JQF7 AC145285.7-201ENST00000614819 1539 ntBASIC19.73■□□□□ 0.75
LINC01556Q5JQF7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LINC01556Q5JQF7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC19.73■□□□□ 0.75
LINC01556Q5JQF7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01556Q5JQF7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.71■□□□□ 0.75
LINC01556Q5JQF7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.71■□□□□ 0.75
LINC01556Q5JQF7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01556Q5JQF7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01556Q5JQF7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms