Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RBM3P98179 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RBM3P98179 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RBM3P98179 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RBM3P98179 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM3P98179 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RBM3P98179 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBM3P98179 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RBM3P98179 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RBM3P98179 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RBM3P98179 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RBM3P98179 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.57■□□□□ 0.4
RBM3P98179 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RBM3P98179 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RBM3P98179 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC17.56■□□□□ 0.4
RBM3P98179 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RBM3P98179 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RBM3P98179 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RBM3P98179 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RBM3P98179 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RBM3P98179 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RBM3P98179 AC139426.1-201ENST00000568218 2529 ntBASIC17.52■□□□□ 0.39
RBM3P98179 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RBM3P98179 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RBM3P98179 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RBM3P98179 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC17.51■□□□□ 0.39
RBM3P98179 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RBM3P98179 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RBM3P98179 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RBM3P98179 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RBM3P98179 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RBM3P98179 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RBM3P98179 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RBM3P98179 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RBM3P98179 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RBM3P98179 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBM3P98179 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBM3P98179 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RBM3P98179 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RBM3P98179 ABCB10P3-201ENST00000561950 2166 ntBASIC17.42■□□□□ 0.38
RBM3P98179 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RBM3P98179 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RBM3P98179 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RBM3P98179 ABCB10P1-201ENST00000614297 2181 ntBASIC17.42■□□□□ 0.38
RBM3P98179 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RBM3P98179 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RBM3P98179 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RBM3P98179 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RBM3P98179 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RBM3P98179 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RBM3P98179 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC17.39■□□□□ 0.37
RBM3P98179 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RBM3P98179 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RBM3P98179 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC17.37■□□□□ 0.37
RBM3P98179 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RBM3P98179 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RBM3P98179 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RBM3P98179 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RBM3P98179 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.36■□□□□ 0.37
RBM3P98179 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RBM3P98179 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.36■□□□□ 0.37
RBM3P98179 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RBM3P98179 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RBM3P98179 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RBM3P98179 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RBM3P98179 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RBM3P98179 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RBM3P98179 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.33■□□□□ 0.36
RBM3P98179 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RBM3P98179 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RBM3P98179 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RBM3P98179 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RBM3P98179 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC17.31■□□□□ 0.36
RBM3P98179 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
RBM3P98179 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RBM3P98179 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RBM3P98179 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBM3P98179 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBM3P98179 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RBM3P98179 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RBM3P98179 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RBM3P98179 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC17.27■□□□□ 0.36
RBM3P98179 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RBM3P98179 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC17.25■□□□□ 0.35
RBM3P98179 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RBM3P98179 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.23■□□□□ 0.35
RBM3P98179 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RBM3P98179 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.23■□□□□ 0.35
RBM3P98179 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RBM3P98179 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RBM3P98179 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC17.21■□□□□ 0.35
RBM3P98179 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RBM3P98179 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RBM3P98179 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC17.2■□□□□ 0.34
RBM3P98179 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC17.2■□□□□ 0.34
RBM3P98179 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RBM3P98179 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RBM3P98179 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RBM3P98179 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RBM3P98179 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms