Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2D3P61077 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBE2D3P61077 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBE2D3P61077 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
UBE2D3P61077 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.61■□□□□ 0.73
UBE2D3P61077 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
UBE2D3P61077 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE2D3P61077 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBE2D3P61077 ZNRF2P1-201ENST00000441407 443 ntBASIC19.59■□□□□ 0.73
UBE2D3P61077 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBE2D3P61077 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBE2D3P61077 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBE2D3P61077 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
UBE2D3P61077 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2D3P61077 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.56■□□□□ 0.72
UBE2D3P61077 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.56■□□□□ 0.72
UBE2D3P61077 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2D3P61077 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2D3P61077 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2D3P61077 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2D3P61077 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.55■□□□□ 0.72
UBE2D3P61077 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.55■□□□□ 0.72
UBE2D3P61077 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.54■□□□□ 0.72
UBE2D3P61077 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBE2D3P61077 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBE2D3P61077 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBE2D3P61077 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBE2D3P61077 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBE2D3P61077 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.52■□□□□ 0.72
UBE2D3P61077 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.52■□□□□ 0.72
UBE2D3P61077 AC139426.1-201ENST00000568218 2529 ntBASIC19.52■□□□□ 0.71
UBE2D3P61077 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2D3P61077 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2D3P61077 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
UBE2D3P61077 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2D3P61077 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2D3P61077 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
UBE2D3P61077 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.48■□□□□ 0.71
UBE2D3P61077 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
UBE2D3P61077 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBE2D3P61077 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.47■□□□□ 0.71
UBE2D3P61077 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.47■□□□□ 0.71
UBE2D3P61077 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
UBE2D3P61077 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
UBE2D3P61077 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE2D3P61077 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
UBE2D3P61077 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE2D3P61077 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.45■□□□□ 0.7
UBE2D3P61077 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2D3P61077 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2D3P61077 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2D3P61077 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2D3P61077 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2D3P61077 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.43■□□□□ 0.7
UBE2D3P61077 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2D3P61077 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2D3P61077 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2D3P61077 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2D3P61077 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2D3P61077 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.39■□□□□ 0.69
UBE2D3P61077 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.38■□□□□ 0.69
UBE2D3P61077 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE2D3P61077 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE2D3P61077 AC120057.4-201ENST00000624722 1615 ntBASIC19.37■□□□□ 0.69
UBE2D3P61077 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.37■□□□□ 0.69
UBE2D3P61077 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2D3P61077 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2D3P61077 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.36■□□□□ 0.69
UBE2D3P61077 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2D3P61077 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2D3P61077 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.32■□□□□ 0.68
UBE2D3P61077 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2D3P61077 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2D3P61077 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2D3P61077 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2D3P61077 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE2D3P61077 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2D3P61077 DYNLL1-208ENST00000550178 581 ntBASIC19.3■□□□□ 0.68
UBE2D3P61077 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.29■□□□□ 0.68
UBE2D3P61077 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE2D3P61077 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2D3P61077 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.28■□□□□ 0.68
UBE2D3P61077 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2D3P61077 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE2D3P61077 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.28■□□□□ 0.68
UBE2D3P61077 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBE2D3P61077 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
UBE2D3P61077 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.27■□□□□ 0.67
UBE2D3P61077 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.26■□□□□ 0.67
UBE2D3P61077 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2D3P61077 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2D3P61077 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.24■□□□□ 0.67
UBE2D3P61077 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2D3P61077 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBE2D3P61077 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBE2D3P61077 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBE2D3P61077 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBE2D3P61077 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.21■□□□□ 0.67
UBE2D3P61077 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBE2D3P61077 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms