Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
PMS1P54277 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.8■■■□□ 2.52
PMS1P54277 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.8■■■□□ 2.52
PMS1P54277 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
PMS1P54277 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
PMS1P54277 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
PMS1P54277 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
PMS1P54277 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PMS1P54277 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.75■■■□□ 2.51
PMS1P54277 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PMS1P54277 DYNLL1-208ENST00000550178 581 ntBASIC30.74■■■□□ 2.51
PMS1P54277 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.74■■■□□ 2.51
PMS1P54277 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PMS1P54277 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
PMS1P54277 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.72■■■□□ 2.51
PMS1P54277 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.71■■■□□ 2.51
PMS1P54277 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PMS1P54277 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
PMS1P54277 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.65■■■□□ 2.5
PMS1P54277 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PMS1P54277 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PMS1P54277 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PMS1P54277 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PMS1P54277 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PMS1P54277 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.61■■■□□ 2.49
PMS1P54277 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PMS1P54277 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
PMS1P54277 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PMS1P54277 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PMS1P54277 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
PMS1P54277 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
PMS1P54277 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.56■■■□□ 2.48
PMS1P54277 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PMS1P54277 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PMS1P54277 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.56■■■□□ 2.48
PMS1P54277 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.55■■■□□ 2.48
PMS1P54277 AL031258.1-201ENST00000623562 325 ntBASIC30.55■■■□□ 2.48
PMS1P54277 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PMS1P54277 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PMS1P54277 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
PMS1P54277 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.54■■■□□ 2.48
PMS1P54277 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.54■■■□□ 2.48
PMS1P54277 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PMS1P54277 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.51■■■□□ 2.47
PMS1P54277 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PMS1P54277 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.5■■■□□ 2.47
PMS1P54277 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.5■■■□□ 2.47
PMS1P54277 AC120057.4-201ENST00000624722 1615 ntBASIC30.5■■■□□ 2.47
PMS1P54277 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
PMS1P54277 AP002365.1-201ENST00000603448 772 ntBASIC30.48■■■□□ 2.47
PMS1P54277 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PMS1P54277 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.47■■■□□ 2.47
PMS1P54277 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
PMS1P54277 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
PMS1P54277 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.45■■■□□ 2.47
PMS1P54277 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
PMS1P54277 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.43■■■□□ 2.46
PMS1P54277 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.43■■■□□ 2.46
PMS1P54277 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
PMS1P54277 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
PMS1P54277 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PMS1P54277 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
PMS1P54277 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.38■■■□□ 2.45
PMS1P54277 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.37■■■□□ 2.45
PMS1P54277 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PMS1P54277 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.36■■■□□ 2.45
PMS1P54277 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
PMS1P54277 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
PMS1P54277 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PMS1P54277 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PMS1P54277 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PMS1P54277 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.31■■■□□ 2.44
PMS1P54277 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
PMS1P54277 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
PMS1P54277 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PMS1P54277 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
PMS1P54277 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.25■■■□□ 2.43
PMS1P54277 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
PMS1P54277 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
PMS1P54277 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.2■■■□□ 2.43
PMS1P54277 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
PMS1P54277 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
PMS1P54277 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
PMS1P54277 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PMS1P54277 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
PMS1P54277 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PMS1P54277 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
PMS1P54277 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.15■■■□□ 2.42
PMS1P54277 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.15■■■□□ 2.42
PMS1P54277 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PMS1P54277 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.14■■■□□ 2.42
PMS1P54277 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
PMS1P54277 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PMS1P54277 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PMS1P54277 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PMS1P54277 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PMS1P54277 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PMS1P54277 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
PMS1P54277 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.09■■■□□ 2.41
PMS1P54277 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.08■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms