Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
APPP05067 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC33.29■■■□□ 2.92
APPP05067 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC33.28■■■□□ 2.92
APPP05067 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
APPP05067 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC33.26■■■□□ 2.91
APPP05067 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
APPP05067 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC33.24■■■□□ 2.91
APPP05067 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC33.24■■■□□ 2.91
APPP05067 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC33.23■■■□□ 2.91
APPP05067 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
APPP05067 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
APPP05067 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
APPP05067 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC33.2■■■□□ 2.9
APPP05067 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC33.2■■■□□ 2.9
APPP05067 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
APPP05067 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC33.18■■■□□ 2.9
APPP05067 SETD8P1-201ENST00000623146 1180 ntBASIC33.18■■■□□ 2.9
APPP05067 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
APPP05067 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
APPP05067 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
APPP05067 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
APPP05067 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
APPP05067 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC33.11■■■□□ 2.89
APPP05067 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
APPP05067 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC33.1■■■□□ 2.89
APPP05067 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
APPP05067 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC33.08■■■□□ 2.89
APPP05067 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC33.08■■■□□ 2.89
APPP05067 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC33.08■■■□□ 2.89
APPP05067 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
APPP05067 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC33.07■■■□□ 2.89
APPP05067 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
APPP05067 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC33.07■■■□□ 2.88
APPP05067 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
APPP05067 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
APPP05067 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
APPP05067 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
APPP05067 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC33.04■■■□□ 2.88
APPP05067 AC097358.2-201ENST00000607541 1159 ntBASIC33.04■■■□□ 2.88
APPP05067 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC33.03■■■□□ 2.88
APPP05067 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC33.01■■■□□ 2.88
APPP05067 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC33■■■□□ 2.87
APPP05067 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC33■■■□□ 2.87
APPP05067 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
APPP05067 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
APPP05067 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
APPP05067 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
APPP05067 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.97■■■□□ 2.87
APPP05067 AL133380.1-201ENST00000506013 324 ntBASIC32.95■■■□□ 2.87
APPP05067 AC136428.2-201ENST00000563187 214 ntBASIC32.95■■■□□ 2.87
APPP05067 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
APPP05067 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
APPP05067 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.93■■■□□ 2.86
APPP05067 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
APPP05067 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.89■■■□□ 2.86
APPP05067 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.88■■■□□ 2.85
APPP05067 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
APPP05067 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
APPP05067 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
APPP05067 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC32.87■■■□□ 2.85
APPP05067 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.87■■■□□ 2.85
APPP05067 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
APPP05067 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.86■■■□□ 2.85
APPP05067 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
APPP05067 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.82■■■□□ 2.84
APPP05067 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
APPP05067 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.81■■■□□ 2.84
APPP05067 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.81■■■□□ 2.84
APPP05067 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
APPP05067 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
APPP05067 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
APPP05067 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
APPP05067 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
APPP05067 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.77■■■□□ 2.84
APPP05067 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC32.74■■■□□ 2.83
APPP05067 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.74■■■□□ 2.83
APPP05067 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
APPP05067 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
APPP05067 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
APPP05067 CAHM-201ENST00000604200 896 ntBASIC32.7■■■□□ 2.83
APPP05067 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
APPP05067 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.68■■■□□ 2.82
APPP05067 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
APPP05067 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC32.66■■■□□ 2.82
APPP05067 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
APPP05067 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.65■■■□□ 2.82
APPP05067 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
APPP05067 AL391121.1-201ENST00000607967 1349 ntBASIC32.64■■■□□ 2.82
APPP05067 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.64■■■□□ 2.82
APPP05067 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.63■■■□□ 2.81
APPP05067 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.63■■■□□ 2.81
APPP05067 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.63■■■□□ 2.81
APPP05067 SUZ12P1-203ENST00000578195 985 ntBASIC32.62■■■□□ 2.81
APPP05067 AC120057.4-201ENST00000624722 1615 ntBASIC32.61■■■□□ 2.81
APPP05067 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
APPP05067 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
APPP05067 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.58■■■□□ 2.81
APPP05067 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
APPP05067 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
APPP05067 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms