Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
UBE4BO95155 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.61■■■□□ 2.49
UBE4BO95155 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
UBE4BO95155 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
UBE4BO95155 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.6■■■□□ 2.49
UBE4BO95155 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.58■■■□□ 2.49
UBE4BO95155 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
UBE4BO95155 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
UBE4BO95155 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.54■■■□□ 2.48
UBE4BO95155 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.53■■■□□ 2.48
UBE4BO95155 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.53■■■□□ 2.48
UBE4BO95155 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
UBE4BO95155 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
UBE4BO95155 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
UBE4BO95155 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.52■■■□□ 2.48
UBE4BO95155 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
UBE4BO95155 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.51■■■□□ 2.47
UBE4BO95155 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.5■■■□□ 2.47
UBE4BO95155 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
UBE4BO95155 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
UBE4BO95155 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.47■■■□□ 2.47
UBE4BO95155 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
UBE4BO95155 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.45■■■□□ 2.46
UBE4BO95155 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.44■■■□□ 2.46
UBE4BO95155 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
UBE4BO95155 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
UBE4BO95155 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
UBE4BO95155 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
UBE4BO95155 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.4■■■□□ 2.46
UBE4BO95155 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
UBE4BO95155 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
UBE4BO95155 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
UBE4BO95155 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
UBE4BO95155 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.32■■■□□ 2.44
UBE4BO95155 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
UBE4BO95155 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
UBE4BO95155 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
UBE4BO95155 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.31■■■□□ 2.44
UBE4BO95155 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
UBE4BO95155 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.31■■■□□ 2.44
UBE4BO95155 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.3■■■□□ 2.44
UBE4BO95155 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.3■■■□□ 2.44
UBE4BO95155 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.3■■■□□ 2.44
UBE4BO95155 AC120057.4-201ENST00000624722 1615 ntBASIC30.3■■■□□ 2.44
UBE4BO95155 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
UBE4BO95155 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
UBE4BO95155 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
UBE4BO95155 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.26■■■□□ 2.44
UBE4BO95155 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.25■■■□□ 2.43
UBE4BO95155 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
UBE4BO95155 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
UBE4BO95155 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
UBE4BO95155 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.23■■■□□ 2.43
UBE4BO95155 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
UBE4BO95155 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
UBE4BO95155 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
UBE4BO95155 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
UBE4BO95155 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.22■■■□□ 2.43
UBE4BO95155 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.22■■■□□ 2.43
UBE4BO95155 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
UBE4BO95155 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
UBE4BO95155 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
UBE4BO95155 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
UBE4BO95155 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.18■■■□□ 2.42
UBE4BO95155 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
UBE4BO95155 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
UBE4BO95155 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
UBE4BO95155 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
UBE4BO95155 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
UBE4BO95155 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
UBE4BO95155 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
UBE4BO95155 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.11■■■□□ 2.41
UBE4BO95155 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
UBE4BO95155 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
UBE4BO95155 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
UBE4BO95155 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
UBE4BO95155 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
UBE4BO95155 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
UBE4BO95155 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
UBE4BO95155 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.01■■■□□ 2.4
UBE4BO95155 RARRES2P7-201ENST00000567349 469 ntBASIC30■■■□□ 2.39
UBE4BO95155 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
UBE4BO95155 AL133380.1-201ENST00000506013 324 ntBASIC29.98■■■□□ 2.39
UBE4BO95155 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
UBE4BO95155 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.96■■■□□ 2.39
UBE4BO95155 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.95■■■□□ 2.39
UBE4BO95155 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.94■■■□□ 2.38
UBE4BO95155 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
UBE4BO95155 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.93■■■□□ 2.38
UBE4BO95155 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.93■■■□□ 2.38
UBE4BO95155 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
UBE4BO95155 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.92■■■□□ 2.38
UBE4BO95155 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
UBE4BO95155 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
UBE4BO95155 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
UBE4BO95155 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
UBE4BO95155 SETD8P1-201ENST00000623146 1180 ntBASIC29.9■■■□□ 2.38
UBE4BO95155 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.89■■■□□ 2.38
UBE4BO95155 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
UBE4BO95155 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms