Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC32.09■■■□□ 2.73
GADD45BO75293 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
GADD45BO75293 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.73
GADD45BO75293 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
GADD45BO75293 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC32.07■■■□□ 2.72
GADD45BO75293 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
GADD45BO75293 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
GADD45BO75293 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
GADD45BO75293 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
GADD45BO75293 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
GADD45BO75293 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
GADD45BO75293 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
GADD45BO75293 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
GADD45BO75293 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
GADD45BO75293 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
GADD45BO75293 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.95■■■□□ 2.7
GADD45BO75293 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
GADD45BO75293 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.93■■■□□ 2.7
GADD45BO75293 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
GADD45BO75293 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.91■■■□□ 2.7
GADD45BO75293 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.9■■■□□ 2.7
GADD45BO75293 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
GADD45BO75293 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.88■■■□□ 2.69
GADD45BO75293 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
GADD45BO75293 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
GADD45BO75293 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
GADD45BO75293 ABCB10P1-201ENST00000614297 2181 ntBASIC31.85■■■□□ 2.69
GADD45BO75293 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
GADD45BO75293 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
GADD45BO75293 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
GADD45BO75293 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
GADD45BO75293 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
GADD45BO75293 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
GADD45BO75293 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
GADD45BO75293 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.79■■■□□ 2.68
GADD45BO75293 AC120057.4-201ENST00000624722 1615 ntBASIC31.78■■■□□ 2.68
GADD45BO75293 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
GADD45BO75293 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
GADD45BO75293 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.76■■■□□ 2.68
GADD45BO75293 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
GADD45BO75293 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
GADD45BO75293 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.74■■■□□ 2.67
GADD45BO75293 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.73■■■□□ 2.67
GADD45BO75293 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.72■■■□□ 2.67
GADD45BO75293 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.71■■■□□ 2.67
GADD45BO75293 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
GADD45BO75293 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
GADD45BO75293 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
GADD45BO75293 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
GADD45BO75293 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
GADD45BO75293 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
GADD45BO75293 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
GADD45BO75293 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
GADD45BO75293 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.64■■■□□ 2.66
GADD45BO75293 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.62■■■□□ 2.65
GADD45BO75293 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.62■■■□□ 2.65
GADD45BO75293 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
GADD45BO75293 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.6■■■□□ 2.65
GADD45BO75293 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
GADD45BO75293 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
GADD45BO75293 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.58■■■□□ 2.65
GADD45BO75293 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
GADD45BO75293 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
GADD45BO75293 ABCB10P3-201ENST00000561950 2166 ntBASIC31.54■■■□□ 2.64
GADD45BO75293 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.54■■■□□ 2.64
GADD45BO75293 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.53■■■□□ 2.64
GADD45BO75293 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
GADD45BO75293 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
GADD45BO75293 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
GADD45BO75293 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
GADD45BO75293 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
GADD45BO75293 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
GADD45BO75293 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.48■■■□□ 2.63
GADD45BO75293 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
GADD45BO75293 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
GADD45BO75293 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.46■■■□□ 2.63
GADD45BO75293 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
GADD45BO75293 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
GADD45BO75293 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
GADD45BO75293 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
GADD45BO75293 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.43■■■□□ 2.62
GADD45BO75293 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.42■■■□□ 2.62
GADD45BO75293 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
GADD45BO75293 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
GADD45BO75293 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
GADD45BO75293 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
GADD45BO75293 AC139426.1-201ENST00000568218 2529 ntBASIC31.4■■■□□ 2.62
GADD45BO75293 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
GADD45BO75293 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
GADD45BO75293 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
GADD45BO75293 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.35■■■□□ 2.61
GADD45BO75293 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
GADD45BO75293 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
GADD45BO75293 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
GADD45BO75293 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
GADD45BO75293 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.27■■■□□ 2.6
GADD45BO75293 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
GADD45BO75293 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
GADD45BO75293 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
GADD45BO75293 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms