Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.78■■■□□ 2.36
TBC1D4O60343 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
TBC1D4O60343 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TBC1D4O60343 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TBC1D4O60343 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.76■■■□□ 2.36
TBC1D4O60343 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.76■■■□□ 2.36
TBC1D4O60343 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.76■■■□□ 2.35
TBC1D4O60343 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TBC1D4O60343 CAHM-201ENST00000604200 896 ntBASIC29.75■■■□□ 2.35
TBC1D4O60343 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
TBC1D4O60343 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
TBC1D4O60343 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TBC1D4O60343 AL133380.1-201ENST00000506013 324 ntBASIC29.72■■■□□ 2.35
TBC1D4O60343 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.72■■■□□ 2.35
TBC1D4O60343 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
TBC1D4O60343 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
TBC1D4O60343 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
TBC1D4O60343 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
TBC1D4O60343 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
TBC1D4O60343 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.67■■■□□ 2.34
TBC1D4O60343 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
TBC1D4O60343 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.64■■■□□ 2.34
TBC1D4O60343 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
TBC1D4O60343 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
TBC1D4O60343 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TBC1D4O60343 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TBC1D4O60343 AL391121.1-201ENST00000607967 1349 ntBASIC29.6■■■□□ 2.33
TBC1D4O60343 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.59■■■□□ 2.33
TBC1D4O60343 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
TBC1D4O60343 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
TBC1D4O60343 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
TBC1D4O60343 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TBC1D4O60343 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
TBC1D4O60343 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.52■■■□□ 2.32
TBC1D4O60343 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.5■■■□□ 2.31
TBC1D4O60343 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.49■■■□□ 2.31
TBC1D4O60343 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.47■■■□□ 2.31
TBC1D4O60343 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
TBC1D4O60343 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
TBC1D4O60343 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
TBC1D4O60343 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
TBC1D4O60343 RPS2P35-201ENST00000443417 897 ntBASIC29.41■■■□□ 2.3
TBC1D4O60343 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
TBC1D4O60343 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.38■■■□□ 2.29
TBC1D4O60343 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.37■■■□□ 2.29
TBC1D4O60343 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
TBC1D4O60343 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
TBC1D4O60343 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
TBC1D4O60343 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.34■■■□□ 2.29
TBC1D4O60343 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
TBC1D4O60343 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
TBC1D4O60343 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.32■■■□□ 2.28
TBC1D4O60343 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
TBC1D4O60343 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
TBC1D4O60343 AL162393.1-201ENST00000437852 946 ntBASIC29.3■■■□□ 2.28
TBC1D4O60343 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
TBC1D4O60343 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.28■■■□□ 2.28
TBC1D4O60343 AP006261.1-201ENST00000584783 668 ntBASIC29.28■■■□□ 2.28
TBC1D4O60343 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
TBC1D4O60343 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.27■■■□□ 2.28
TBC1D4O60343 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.26■■■□□ 2.27
TBC1D4O60343 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
TBC1D4O60343 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
TBC1D4O60343 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.26■■■□□ 2.27
TBC1D4O60343 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
TBC1D4O60343 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
TBC1D4O60343 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
TBC1D4O60343 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
TBC1D4O60343 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.2■■■□□ 2.27
TBC1D4O60343 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
TBC1D4O60343 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.18■■■□□ 2.26
TBC1D4O60343 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.17■■■□□ 2.26
TBC1D4O60343 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
TBC1D4O60343 WASH5P-204ENST00000632292 975 ntBASIC29.16■■■□□ 2.26
TBC1D4O60343 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
TBC1D4O60343 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.15■■■□□ 2.26
TBC1D4O60343 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TBC1D4O60343 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TBC1D4O60343 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TBC1D4O60343 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.14■■■□□ 2.26
TBC1D4O60343 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.13■■■□□ 2.25
TBC1D4O60343 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
TBC1D4O60343 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.11■■■□□ 2.25
TBC1D4O60343 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
TBC1D4O60343 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
TBC1D4O60343 MIR762-201ENST00000390236 83 ntBASIC29.1■■■□□ 2.25
TBC1D4O60343 MIR3665-201ENST00000578708 105 ntBASIC29.09■■■□□ 2.25
TBC1D4O60343 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.08■■■□□ 2.25
TBC1D4O60343 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
TBC1D4O60343 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.07■■■□□ 2.24
TBC1D4O60343 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
TBC1D4O60343 DUX4L28-201ENST00000623687 678 ntBASIC29.06■■■□□ 2.24
TBC1D4O60343 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
TBC1D4O60343 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.04■■■□□ 2.24
TBC1D4O60343 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
TBC1D4O60343 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.03■■■□□ 2.24
TBC1D4O60343 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
TBC1D4O60343 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
TBC1D4O60343 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
TBC1D4O60343 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms