Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.32■■□□□ 1.8
PDLIM1O00151 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDLIM1O00151 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC26.31■■□□□ 1.8
PDLIM1O00151 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDLIM1O00151 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDLIM1O00151 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDLIM1O00151 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
PDLIM1O00151 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PDLIM1O00151 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PDLIM1O00151 AC006077.2-201ENST00000623591 457 ntBASIC26.25■■□□□ 1.79
PDLIM1O00151 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDLIM1O00151 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDLIM1O00151 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDLIM1O00151 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PDLIM1O00151 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.23■■□□□ 1.79
PDLIM1O00151 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.23■■□□□ 1.79
PDLIM1O00151 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PDLIM1O00151 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDLIM1O00151 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PDLIM1O00151 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDLIM1O00151 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
PDLIM1O00151 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PDLIM1O00151 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDLIM1O00151 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
PDLIM1O00151 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
PDLIM1O00151 ZNRF2P1-201ENST00000441407 443 ntBASIC26.13■■□□□ 1.77
PDLIM1O00151 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
PDLIM1O00151 ABCB10P1-201ENST00000614297 2181 ntBASIC26.12■■□□□ 1.77
PDLIM1O00151 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PDLIM1O00151 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PDLIM1O00151 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PDLIM1O00151 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
PDLIM1O00151 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PDLIM1O00151 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.08■■□□□ 1.77
PDLIM1O00151 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PDLIM1O00151 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDLIM1O00151 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
PDLIM1O00151 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.05■■□□□ 1.76
PDLIM1O00151 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PDLIM1O00151 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PDLIM1O00151 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PDLIM1O00151 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDLIM1O00151 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDLIM1O00151 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDLIM1O00151 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDLIM1O00151 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDLIM1O00151 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
PDLIM1O00151 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.98■■□□□ 1.75
PDLIM1O00151 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PDLIM1O00151 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PDLIM1O00151 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.96■■□□□ 1.75
PDLIM1O00151 AC135731.1-201ENST00000569415 2548 ntBASIC25.94■■□□□ 1.74
PDLIM1O00151 ABCB10P3-201ENST00000561950 2166 ntBASIC25.93■■□□□ 1.74
PDLIM1O00151 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PDLIM1O00151 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PDLIM1O00151 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PDLIM1O00151 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PDLIM1O00151 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PDLIM1O00151 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.9■■□□□ 1.74
PDLIM1O00151 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.9■■□□□ 1.74
PDLIM1O00151 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
PDLIM1O00151 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PDLIM1O00151 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PDLIM1O00151 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.89■■□□□ 1.73
PDLIM1O00151 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
PDLIM1O00151 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PDLIM1O00151 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDLIM1O00151 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDLIM1O00151 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PDLIM1O00151 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PDLIM1O00151 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDLIM1O00151 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.86■■□□□ 1.73
PDLIM1O00151 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PDLIM1O00151 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PDLIM1O00151 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PDLIM1O00151 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PDLIM1O00151 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PDLIM1O00151 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDLIM1O00151 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDLIM1O00151 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.83■■□□□ 1.73
PDLIM1O00151 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PDLIM1O00151 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PDLIM1O00151 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PDLIM1O00151 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.81■■□□□ 1.72
PDLIM1O00151 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDLIM1O00151 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PDLIM1O00151 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
PDLIM1O00151 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
PDLIM1O00151 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PDLIM1O00151 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.76■■□□□ 1.71
PDLIM1O00151 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PDLIM1O00151 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
PDLIM1O00151 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC25.72■■□□□ 1.71
PDLIM1O00151 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC25.71■■□□□ 1.71
PDLIM1O00151 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDLIM1O00151 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PDLIM1O00151 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDLIM1O00151 AC120057.4-201ENST00000624722 1615 ntBASIC25.69■■□□□ 1.7
PDLIM1O00151 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDLIM1O00151 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms