Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
SPDYE4A6NLX3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SPDYE4A6NLX3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SPDYE4A6NLX3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.71■■■□□ 2.51
SPDYE4A6NLX3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SPDYE4A6NLX3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SPDYE4A6NLX3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SPDYE4A6NLX3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.64■■■□□ 2.5
SPDYE4A6NLX3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.64■■■□□ 2.5
SPDYE4A6NLX3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.63■■■□□ 2.49
SPDYE4A6NLX3 AL161658.1-201ENST00000623641 1967 ntBASIC30.63■■■□□ 2.49
SPDYE4A6NLX3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.62■■■□□ 2.49
SPDYE4A6NLX3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SPDYE4A6NLX3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
SPDYE4A6NLX3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.61■■■□□ 2.49
SPDYE4A6NLX3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
SPDYE4A6NLX3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SPDYE4A6NLX3 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SPDYE4A6NLX3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
SPDYE4A6NLX3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
SPDYE4A6NLX3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.57■■■□□ 2.48
SPDYE4A6NLX3 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SPDYE4A6NLX3 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.55■■■□□ 2.48
SPDYE4A6NLX3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.55■■■□□ 2.48
SPDYE4A6NLX3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SPDYE4A6NLX3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SPDYE4A6NLX3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
SPDYE4A6NLX3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
SPDYE4A6NLX3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.53■■■□□ 2.48
SPDYE4A6NLX3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
SPDYE4A6NLX3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SPDYE4A6NLX3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SPDYE4A6NLX3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.51■■■□□ 2.47
SPDYE4A6NLX3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SPDYE4A6NLX3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.5■■■□□ 2.47
SPDYE4A6NLX3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.5■■■□□ 2.47
SPDYE4A6NLX3 AC097358.2-201ENST00000607541 1159 ntBASIC30.5■■■□□ 2.47
SPDYE4A6NLX3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.49■■■□□ 2.47
SPDYE4A6NLX3 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
SPDYE4A6NLX3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SPDYE4A6NLX3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SPDYE4A6NLX3 AC139426.1-201ENST00000568218 2529 ntBASIC30.45■■■□□ 2.47
SPDYE4A6NLX3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SPDYE4A6NLX3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.45■■■□□ 2.47
SPDYE4A6NLX3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
SPDYE4A6NLX3 SETD8P1-201ENST00000623146 1180 ntBASIC30.44■■■□□ 2.46
SPDYE4A6NLX3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SPDYE4A6NLX3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.4■■■□□ 2.46
SPDYE4A6NLX3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SPDYE4A6NLX3 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SPDYE4A6NLX3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SPDYE4A6NLX3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SPDYE4A6NLX3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.37■■■□□ 2.45
SPDYE4A6NLX3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SPDYE4A6NLX3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
SPDYE4A6NLX3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.35■■■□□ 2.45
SPDYE4A6NLX3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SPDYE4A6NLX3 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SPDYE4A6NLX3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SPDYE4A6NLX3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
SPDYE4A6NLX3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SPDYE4A6NLX3 AC136428.2-201ENST00000563187 214 ntBASIC30.27■■■□□ 2.44
SPDYE4A6NLX3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.26■■■□□ 2.43
SPDYE4A6NLX3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SPDYE4A6NLX3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SPDYE4A6NLX3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SPDYE4A6NLX3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SPDYE4A6NLX3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SPDYE4A6NLX3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.2■■■□□ 2.43
SPDYE4A6NLX3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
SPDYE4A6NLX3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
SPDYE4A6NLX3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SPDYE4A6NLX3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.14■■■□□ 2.42
SPDYE4A6NLX3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.14■■■□□ 2.42
SPDYE4A6NLX3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
SPDYE4A6NLX3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SPDYE4A6NLX3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.13■■■□□ 2.41
SPDYE4A6NLX3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SPDYE4A6NLX3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.12■■■□□ 2.41
SPDYE4A6NLX3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
SPDYE4A6NLX3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.12■■■□□ 2.41
SPDYE4A6NLX3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
SPDYE4A6NLX3 SUZ12P1-203ENST00000578195 985 ntBASIC30.11■■■□□ 2.41
SPDYE4A6NLX3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.11■■■□□ 2.41
SPDYE4A6NLX3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.11■■■□□ 2.41
SPDYE4A6NLX3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
SPDYE4A6NLX3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SPDYE4A6NLX3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
SPDYE4A6NLX3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SPDYE4A6NLX3 RPS2P35-201ENST00000443417 897 ntBASIC30.09■■■□□ 2.41
SPDYE4A6NLX3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SPDYE4A6NLX3 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.09■■■□□ 2.41
SPDYE4A6NLX3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SPDYE4A6NLX3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.06■■■□□ 2.4
SPDYE4A6NLX3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SPDYE4A6NLX3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SPDYE4A6NLX3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.05■■■□□ 2.4
SPDYE4A6NLX3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SPDYE4A6NLX3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SPDYE4A6NLX3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms