Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
SPDYE4A6NLX3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
SPDYE4A6NLX3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
SPDYE4A6NLX3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.84■■■□□ 2.69
SPDYE4A6NLX3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SPDYE4A6NLX3 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SPDYE4A6NLX3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SPDYE4A6NLX3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.75■■■□□ 2.67
SPDYE4A6NLX3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.74■■■□□ 2.67
SPDYE4A6NLX3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.73■■■□□ 2.67
SPDYE4A6NLX3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.73■■■□□ 2.67
SPDYE4A6NLX3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SPDYE4A6NLX3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.71■■■□□ 2.67
SPDYE4A6NLX3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
SPDYE4A6NLX3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
SPDYE4A6NLX3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SPDYE4A6NLX3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SPDYE4A6NLX3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.65■■■□□ 2.66
SPDYE4A6NLX3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
SPDYE4A6NLX3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SPDYE4A6NLX3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.62■■■□□ 2.65
SPDYE4A6NLX3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
SPDYE4A6NLX3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
SPDYE4A6NLX3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.54■■■□□ 2.64
SPDYE4A6NLX3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
SPDYE4A6NLX3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.5■■■□□ 2.63
SPDYE4A6NLX3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
SPDYE4A6NLX3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63
SPDYE4A6NLX3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.48■■■□□ 2.63
SPDYE4A6NLX3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
SPDYE4A6NLX3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SPDYE4A6NLX3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SPDYE4A6NLX3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SPDYE4A6NLX3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.45■■■□□ 2.63
SPDYE4A6NLX3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.45■■■□□ 2.62
SPDYE4A6NLX3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SPDYE4A6NLX3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.43■■■□□ 2.62
SPDYE4A6NLX3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.41■■■□□ 2.62
SPDYE4A6NLX3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
SPDYE4A6NLX3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
SPDYE4A6NLX3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
SPDYE4A6NLX3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SPDYE4A6NLX3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.35■■■□□ 2.61
SPDYE4A6NLX3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SPDYE4A6NLX3 DYNLL1-208ENST00000550178 581 ntBASIC31.32■■■□□ 2.6
SPDYE4A6NLX3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
SPDYE4A6NLX3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.28■■■□□ 2.6
SPDYE4A6NLX3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.27■■■□□ 2.6
SPDYE4A6NLX3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SPDYE4A6NLX3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SPDYE4A6NLX3 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.21■■■□□ 2.59
SPDYE4A6NLX3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.2■■■□□ 2.59
SPDYE4A6NLX3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SPDYE4A6NLX3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.18■■■□□ 2.58
SPDYE4A6NLX3 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SPDYE4A6NLX3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.14■■■□□ 2.58
SPDYE4A6NLX3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SPDYE4A6NLX3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.12■■■□□ 2.57
SPDYE4A6NLX3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SPDYE4A6NLX3 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.06■■■□□ 2.56
SPDYE4A6NLX3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
SPDYE4A6NLX3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SPDYE4A6NLX3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SPDYE4A6NLX3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
SPDYE4A6NLX3 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
SPDYE4A6NLX3 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.56
SPDYE4A6NLX3 AL031258.1-201ENST00000623562 325 ntBASIC31.01■■■□□ 2.55
SPDYE4A6NLX3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31■■■□□ 2.55
SPDYE4A6NLX3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SPDYE4A6NLX3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SPDYE4A6NLX3 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.98■■■□□ 2.55
SPDYE4A6NLX3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.98■■■□□ 2.55
SPDYE4A6NLX3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.98■■■□□ 2.55
SPDYE4A6NLX3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SPDYE4A6NLX3 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SPDYE4A6NLX3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
SPDYE4A6NLX3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.93■■■□□ 2.54
SPDYE4A6NLX3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
SPDYE4A6NLX3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.91■■■□□ 2.54
SPDYE4A6NLX3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
SPDYE4A6NLX3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.9■■■□□ 2.54
SPDYE4A6NLX3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
SPDYE4A6NLX3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SPDYE4A6NLX3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SPDYE4A6NLX3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.87■■■□□ 2.53
SPDYE4A6NLX3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.86■■■□□ 2.53
SPDYE4A6NLX3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SPDYE4A6NLX3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
SPDYE4A6NLX3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SPDYE4A6NLX3 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SPDYE4A6NLX3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
SPDYE4A6NLX3 RARRES2P7-201ENST00000567349 469 ntBASIC30.79■■■□□ 2.52
SPDYE4A6NLX3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SPDYE4A6NLX3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
SPDYE4A6NLX3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.78■■■□□ 2.52
SPDYE4A6NLX3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
SPDYE4A6NLX3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
SPDYE4A6NLX3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SPDYE4A6NLX3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.73■■■□□ 2.51
SPDYE4A6NLX3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms