Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SPDYE3A6NKU9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SPDYE3A6NKU9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SPDYE3A6NKU9 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SPDYE3A6NKU9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.76■■■□□ 2.68
SPDYE3A6NKU9 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SPDYE3A6NKU9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SPDYE3A6NKU9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
SPDYE3A6NKU9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.74■■■□□ 2.67
SPDYE3A6NKU9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.74■■■□□ 2.67
SPDYE3A6NKU9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
SPDYE3A6NKU9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.73■■■□□ 2.67
SPDYE3A6NKU9 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
SPDYE3A6NKU9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SPDYE3A6NKU9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.72■■■□□ 2.67
SPDYE3A6NKU9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.72■■■□□ 2.67
SPDYE3A6NKU9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SPDYE3A6NKU9 AC097358.2-201ENST00000607541 1159 ntBASIC31.69■■■□□ 2.66
SPDYE3A6NKU9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
SPDYE3A6NKU9 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SPDYE3A6NKU9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
SPDYE3A6NKU9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SPDYE3A6NKU9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SPDYE3A6NKU9 AC136428.2-201ENST00000563187 214 ntBASIC31.63■■■□□ 2.65
SPDYE3A6NKU9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SPDYE3A6NKU9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.6■■■□□ 2.65
SPDYE3A6NKU9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SPDYE3A6NKU9 AL133380.1-201ENST00000506013 324 ntBASIC31.58■■■□□ 2.65
SPDYE3A6NKU9 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SPDYE3A6NKU9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SPDYE3A6NKU9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.57■■■□□ 2.64
SPDYE3A6NKU9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SPDYE3A6NKU9 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.54■■■□□ 2.64
SPDYE3A6NKU9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SPDYE3A6NKU9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.54■■■□□ 2.64
SPDYE3A6NKU9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.53■■■□□ 2.64
SPDYE3A6NKU9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SPDYE3A6NKU9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.52■■■□□ 2.64
SPDYE3A6NKU9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SPDYE3A6NKU9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.51■■■□□ 2.64
SPDYE3A6NKU9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.64
SPDYE3A6NKU9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.51■■■□□ 2.63
SPDYE3A6NKU9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
SPDYE3A6NKU9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.5■■■□□ 2.63
SPDYE3A6NKU9 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.48■■■□□ 2.63
SPDYE3A6NKU9 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SPDYE3A6NKU9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
SPDYE3A6NKU9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.46■■■□□ 2.63
SPDYE3A6NKU9 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
SPDYE3A6NKU9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SPDYE3A6NKU9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SPDYE3A6NKU9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SPDYE3A6NKU9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.42■■■□□ 2.62
SPDYE3A6NKU9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.42■■■□□ 2.62
SPDYE3A6NKU9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SPDYE3A6NKU9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
SPDYE3A6NKU9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SPDYE3A6NKU9 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.38■■■□□ 2.61
SPDYE3A6NKU9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SPDYE3A6NKU9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.37■■■□□ 2.61
SPDYE3A6NKU9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SPDYE3A6NKU9 CAHM-201ENST00000604200 896 ntBASIC31.35■■■□□ 2.61
SPDYE3A6NKU9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
SPDYE3A6NKU9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
SPDYE3A6NKU9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SPDYE3A6NKU9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SPDYE3A6NKU9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.33■■■□□ 2.61
SPDYE3A6NKU9 SUZ12P1-203ENST00000578195 985 ntBASIC31.33■■■□□ 2.61
SPDYE3A6NKU9 AL391121.1-201ENST00000607967 1349 ntBASIC31.31■■■□□ 2.6
SPDYE3A6NKU9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SPDYE3A6NKU9 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.3■■■□□ 2.6
SPDYE3A6NKU9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.3■■■□□ 2.6
SPDYE3A6NKU9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SPDYE3A6NKU9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SPDYE3A6NKU9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.29■■■□□ 2.6
SPDYE3A6NKU9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SPDYE3A6NKU9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SPDYE3A6NKU9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SPDYE3A6NKU9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SPDYE3A6NKU9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SPDYE3A6NKU9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SPDYE3A6NKU9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SPDYE3A6NKU9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.23■■■□□ 2.59
SPDYE3A6NKU9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
SPDYE3A6NKU9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SPDYE3A6NKU9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.18■■■□□ 2.58
SPDYE3A6NKU9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SPDYE3A6NKU9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SPDYE3A6NKU9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.16■■■□□ 2.58
SPDYE3A6NKU9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.16■■■□□ 2.58
SPDYE3A6NKU9 WASH5P-204ENST00000632292 975 ntBASIC31.16■■■□□ 2.58
SPDYE3A6NKU9 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SPDYE3A6NKU9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SPDYE3A6NKU9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SPDYE3A6NKU9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SPDYE3A6NKU9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.14■■■□□ 2.58
SPDYE3A6NKU9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
SPDYE3A6NKU9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SPDYE3A6NKU9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SPDYE3A6NKU9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms