Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SH3D21A4FU49 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SH3D21A4FU49 DYNLL1-208ENST00000550178 581 ntBASIC25.67■■□□□ 1.7
SH3D21A4FU49 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SH3D21A4FU49 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SH3D21A4FU49 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SH3D21A4FU49 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
SH3D21A4FU49 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
SH3D21A4FU49 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SH3D21A4FU49 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SH3D21A4FU49 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SH3D21A4FU49 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SH3D21A4FU49 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
SH3D21A4FU49 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.59■■□□□ 1.69
SH3D21A4FU49 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SH3D21A4FU49 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SH3D21A4FU49 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC25.57■■□□□ 1.68
SH3D21A4FU49 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SH3D21A4FU49 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SH3D21A4FU49 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SH3D21A4FU49 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SH3D21A4FU49 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SH3D21A4FU49 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SH3D21A4FU49 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SH3D21A4FU49 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.53■■□□□ 1.68
SH3D21A4FU49 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SH3D21A4FU49 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SH3D21A4FU49 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SH3D21A4FU49 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SH3D21A4FU49 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
SH3D21A4FU49 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.47■■□□□ 1.67
SH3D21A4FU49 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.47■■□□□ 1.67
SH3D21A4FU49 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SH3D21A4FU49 AL031258.1-201ENST00000623562 325 ntBASIC25.46■■□□□ 1.67
SH3D21A4FU49 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SH3D21A4FU49 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.45■■□□□ 1.66
SH3D21A4FU49 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
SH3D21A4FU49 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH3D21A4FU49 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SH3D21A4FU49 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.39■■□□□ 1.66
SH3D21A4FU49 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC25.38■■□□□ 1.65
SH3D21A4FU49 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
SH3D21A4FU49 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.36■■□□□ 1.65
SH3D21A4FU49 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SH3D21A4FU49 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SH3D21A4FU49 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SH3D21A4FU49 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.34■■□□□ 1.65
SH3D21A4FU49 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
SH3D21A4FU49 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.33■■□□□ 1.65
SH3D21A4FU49 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.33■■□□□ 1.65
SH3D21A4FU49 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SH3D21A4FU49 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH3D21A4FU49 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SH3D21A4FU49 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
SH3D21A4FU49 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SH3D21A4FU49 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SH3D21A4FU49 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SH3D21A4FU49 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SH3D21A4FU49 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SH3D21A4FU49 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.26■■□□□ 1.63
SH3D21A4FU49 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.25■■□□□ 1.63
SH3D21A4FU49 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
SH3D21A4FU49 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SH3D21A4FU49 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SH3D21A4FU49 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.21■■□□□ 1.63
SH3D21A4FU49 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.2■■□□□ 1.62
SH3D21A4FU49 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
SH3D21A4FU49 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SH3D21A4FU49 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SH3D21A4FU49 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SH3D21A4FU49 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SH3D21A4FU49 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SH3D21A4FU49 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SH3D21A4FU49 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SH3D21A4FU49 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC25.18■■□□□ 1.62
SH3D21A4FU49 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SH3D21A4FU49 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC25.16■■□□□ 1.62
SH3D21A4FU49 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SH3D21A4FU49 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SH3D21A4FU49 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SH3D21A4FU49 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.14■■□□□ 1.62
SH3D21A4FU49 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SH3D21A4FU49 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SH3D21A4FU49 RARRES2P7-201ENST00000567349 469 ntBASIC25.12■■□□□ 1.61
SH3D21A4FU49 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SH3D21A4FU49 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.12■■□□□ 1.61
SH3D21A4FU49 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SH3D21A4FU49 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.1■■□□□ 1.61
SH3D21A4FU49 ABCB10P1-201ENST00000614297 2181 ntBASIC25.1■■□□□ 1.61
SH3D21A4FU49 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.09■■□□□ 1.61
SH3D21A4FU49 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.09■■□□□ 1.61
SH3D21A4FU49 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SH3D21A4FU49 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SH3D21A4FU49 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SH3D21A4FU49 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
SH3D21A4FU49 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SH3D21A4FU49 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.06■■□□□ 1.6
SH3D21A4FU49 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SH3D21A4FU49 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
SH3D21A4FU49 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms