Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.14■■■□□ 2.1
TCRBV9S1A1TA0A576 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TCRBV9S1A1TA0A576 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.11■■■□□ 2.09
TCRBV9S1A1TA0A576 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TCRBV9S1A1TA0A576 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TCRBV9S1A1TA0A576 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.08■■■□□ 2.09
TCRBV9S1A1TA0A576 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.07■■■□□ 2.08
TCRBV9S1A1TA0A576 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
TCRBV9S1A1TA0A576 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TCRBV9S1A1TA0A576 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.05■■■□□ 2.08
TCRBV9S1A1TA0A576 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
TCRBV9S1A1TA0A576 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.04■■■□□ 2.08
TCRBV9S1A1TA0A576 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
TCRBV9S1A1TA0A576 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.04■■■□□ 2.08
TCRBV9S1A1TA0A576 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
TCRBV9S1A1TA0A576 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
TCRBV9S1A1TA0A576 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.99■■■□□ 2.07
TCRBV9S1A1TA0A576 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TCRBV9S1A1TA0A576 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
TCRBV9S1A1TA0A576 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.97■■■□□ 2.07
TCRBV9S1A1TA0A576 AC006077.2-201ENST00000623591 457 ntBASIC27.97■■■□□ 2.07
TCRBV9S1A1TA0A576 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
TCRBV9S1A1TA0A576 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
TCRBV9S1A1TA0A576 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
TCRBV9S1A1TA0A576 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
TCRBV9S1A1TA0A576 AC120057.4-201ENST00000624722 1615 ntBASIC27.92■■■□□ 2.06
TCRBV9S1A1TA0A576 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
TCRBV9S1A1TA0A576 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
TCRBV9S1A1TA0A576 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.89■■■□□ 2.06
TCRBV9S1A1TA0A576 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
TCRBV9S1A1TA0A576 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
TCRBV9S1A1TA0A576 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.88■■■□□ 2.05
TCRBV9S1A1TA0A576 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.87■■■□□ 2.05
TCRBV9S1A1TA0A576 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.87■■■□□ 2.05
TCRBV9S1A1TA0A576 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
TCRBV9S1A1TA0A576 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
TCRBV9S1A1TA0A576 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.85■■■□□ 2.05
TCRBV9S1A1TA0A576 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
TCRBV9S1A1TA0A576 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
TCRBV9S1A1TA0A576 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.83■■■□□ 2.05
TCRBV9S1A1TA0A576 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
TCRBV9S1A1TA0A576 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
TCRBV9S1A1TA0A576 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
TCRBV9S1A1TA0A576 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
TCRBV9S1A1TA0A576 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
TCRBV9S1A1TA0A576 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
TCRBV9S1A1TA0A576 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
TCRBV9S1A1TA0A576 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
TCRBV9S1A1TA0A576 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TCRBV9S1A1TA0A576 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
TCRBV9S1A1TA0A576 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
TCRBV9S1A1TA0A576 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.77■■■□□ 2.04
TCRBV9S1A1TA0A576 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.76■■■□□ 2.03
TCRBV9S1A1TA0A576 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
TCRBV9S1A1TA0A576 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TCRBV9S1A1TA0A576 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TCRBV9S1A1TA0A576 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TCRBV9S1A1TA0A576 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TCRBV9S1A1TA0A576 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.73■■■□□ 2.03
TCRBV9S1A1TA0A576 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.73■■■□□ 2.03
TCRBV9S1A1TA0A576 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
TCRBV9S1A1TA0A576 ZNRF2P1-201ENST00000441407 443 ntBASIC27.72■■■□□ 2.03
TCRBV9S1A1TA0A576 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
TCRBV9S1A1TA0A576 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
TCRBV9S1A1TA0A576 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
TCRBV9S1A1TA0A576 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
TCRBV9S1A1TA0A576 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TCRBV9S1A1TA0A576 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TCRBV9S1A1TA0A576 ABCB10P1-201ENST00000614297 2181 ntBASIC27.69■■■□□ 2.02
TCRBV9S1A1TA0A576 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
TCRBV9S1A1TA0A576 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.67■■■□□ 2.02
TCRBV9S1A1TA0A576 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TCRBV9S1A1TA0A576 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
TCRBV9S1A1TA0A576 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.64■■■□□ 2.02
TCRBV9S1A1TA0A576 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.64■■■□□ 2.01
TCRBV9S1A1TA0A576 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.01
TCRBV9S1A1TA0A576 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
TCRBV9S1A1TA0A576 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.62■■■□□ 2.01
TCRBV9S1A1TA0A576 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.6■■■□□ 2.01
TCRBV9S1A1TA0A576 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TCRBV9S1A1TA0A576 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TCRBV9S1A1TA0A576 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
TCRBV9S1A1TA0A576 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
TCRBV9S1A1TA0A576 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.57■■■□□ 2
TCRBV9S1A1TA0A576 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.56■■■□□ 2
TCRBV9S1A1TA0A576 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.56■■■□□ 2
TCRBV9S1A1TA0A576 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.55■■■□□ 2
TCRBV9S1A1TA0A576 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
TCRBV9S1A1TA0A576 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.53■■■□□ 2
TCRBV9S1A1TA0A576 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TCRBV9S1A1TA0A576 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TCRBV9S1A1TA0A576 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TCRBV9S1A1TA0A576 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.51■■□□□ 1.99
TCRBV9S1A1TA0A576 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TCRBV9S1A1TA0A576 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TCRBV9S1A1TA0A576 DYNLL1-208ENST00000550178 581 ntBASIC27.47■■□□□ 1.99
TCRBV9S1A1TA0A576 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TCRBV9S1A1TA0A576 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
TCRBV9S1A1TA0A576 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.45■■□□□ 1.98
TCRBV9S1A1TA0A576 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms