Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.61■□□□□ 0.89
TRBV7-9A0A0J9YWB2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV7-9A0A0J9YWB2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV7-9A0A0J9YWB2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.6■□□□□ 0.89
TRBV7-9A0A0J9YWB2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV7-9A0A0J9YWB2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.6■□□□□ 0.89
TRBV7-9A0A0J9YWB2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.59■□□□□ 0.89
TRBV7-9A0A0J9YWB2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
TRBV7-9A0A0J9YWB2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV7-9A0A0J9YWB2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.58■□□□□ 0.89
TRBV7-9A0A0J9YWB2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.58■□□□□ 0.89
TRBV7-9A0A0J9YWB2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV7-9A0A0J9YWB2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TRBV7-9A0A0J9YWB2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV7-9A0A0J9YWB2 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.56■□□□□ 0.88
TRBV7-9A0A0J9YWB2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV7-9A0A0J9YWB2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV7-9A0A0J9YWB2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
TRBV7-9A0A0J9YWB2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.55■□□□□ 0.88
TRBV7-9A0A0J9YWB2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV7-9A0A0J9YWB2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV7-9A0A0J9YWB2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV7-9A0A0J9YWB2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TRBV7-9A0A0J9YWB2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TRBV7-9A0A0J9YWB2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.54■□□□□ 0.88
TRBV7-9A0A0J9YWB2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV7-9A0A0J9YWB2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV7-9A0A0J9YWB2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV7-9A0A0J9YWB2 ZNRF2P1-201ENST00000441407 443 ntBASIC20.52■□□□□ 0.88
TRBV7-9A0A0J9YWB2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRBV7-9A0A0J9YWB2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRBV7-9A0A0J9YWB2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV7-9A0A0J9YWB2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.51■□□□□ 0.87
TRBV7-9A0A0J9YWB2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.5■□□□□ 0.87
TRBV7-9A0A0J9YWB2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV7-9A0A0J9YWB2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.5■□□□□ 0.87
TRBV7-9A0A0J9YWB2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV7-9A0A0J9YWB2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV7-9A0A0J9YWB2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV7-9A0A0J9YWB2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV7-9A0A0J9YWB2 AC120057.4-201ENST00000624722 1615 ntBASIC20.49■□□□□ 0.87
TRBV7-9A0A0J9YWB2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRBV7-9A0A0J9YWB2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.47■□□□□ 0.87
TRBV7-9A0A0J9YWB2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TRBV7-9A0A0J9YWB2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV7-9A0A0J9YWB2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV7-9A0A0J9YWB2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV7-9A0A0J9YWB2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.45■□□□□ 0.86
TRBV7-9A0A0J9YWB2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV7-9A0A0J9YWB2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV7-9A0A0J9YWB2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV7-9A0A0J9YWB2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV7-9A0A0J9YWB2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TRBV7-9A0A0J9YWB2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV7-9A0A0J9YWB2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV7-9A0A0J9YWB2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV7-9A0A0J9YWB2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV7-9A0A0J9YWB2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV7-9A0A0J9YWB2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV7-9A0A0J9YWB2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.39■□□□□ 0.85
TRBV7-9A0A0J9YWB2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.38■□□□□ 0.85
TRBV7-9A0A0J9YWB2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.37■□□□□ 0.85
TRBV7-9A0A0J9YWB2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV7-9A0A0J9YWB2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.37■□□□□ 0.85
TRBV7-9A0A0J9YWB2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV7-9A0A0J9YWB2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV7-9A0A0J9YWB2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.35■□□□□ 0.85
TRBV7-9A0A0J9YWB2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV7-9A0A0J9YWB2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRBV7-9A0A0J9YWB2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV7-9A0A0J9YWB2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV7-9A0A0J9YWB2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.33■□□□□ 0.85
TRBV7-9A0A0J9YWB2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.33■□□□□ 0.84
TRBV7-9A0A0J9YWB2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.33■□□□□ 0.84
TRBV7-9A0A0J9YWB2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.32■□□□□ 0.84
TRBV7-9A0A0J9YWB2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TRBV7-9A0A0J9YWB2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV7-9A0A0J9YWB2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.3■□□□□ 0.84
TRBV7-9A0A0J9YWB2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.29■□□□□ 0.84
TRBV7-9A0A0J9YWB2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV7-9A0A0J9YWB2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.29■□□□□ 0.84
TRBV7-9A0A0J9YWB2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV7-9A0A0J9YWB2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV7-9A0A0J9YWB2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV7-9A0A0J9YWB2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.25■□□□□ 0.83
TRBV7-9A0A0J9YWB2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.24■□□□□ 0.83
TRBV7-9A0A0J9YWB2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV7-9A0A0J9YWB2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV7-9A0A0J9YWB2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV7-9A0A0J9YWB2 DYNLL1-208ENST00000550178 581 ntBASIC20.2■□□□□ 0.82
TRBV7-9A0A0J9YWB2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV7-9A0A0J9YWB2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRBV7-9A0A0J9YWB2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV7-9A0A0J9YWB2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV7-9A0A0J9YWB2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV7-9A0A0J9YWB2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV7-9A0A0J9YWB2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV7-9A0A0J9YWB2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV7-9A0A0J9YWB2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV7-9A0A0J9YWB2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms