Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV25A0A0B4J276 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV25A0A0B4J276 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.87■□□□□ 0.93
TRAV25A0A0B4J276 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.86■□□□□ 0.93
TRAV25A0A0B4J276 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAV25A0A0B4J276 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV25A0A0B4J276 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV25A0A0B4J276 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV25A0A0B4J276 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.83■□□□□ 0.93
TRAV25A0A0B4J276 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV25A0A0B4J276 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV25A0A0B4J276 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV25A0A0B4J276 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TRAV25A0A0B4J276 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV25A0A0B4J276 SETD8P1-201ENST00000623146 1180 ntBASIC20.79■□□□□ 0.92
TRAV25A0A0B4J276 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV25A0A0B4J276 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAV25A0A0B4J276 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV25A0A0B4J276 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAV25A0A0B4J276 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV25A0A0B4J276 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV25A0A0B4J276 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TRAV25A0A0B4J276 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV25A0A0B4J276 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV25A0A0B4J276 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV25A0A0B4J276 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV25A0A0B4J276 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV25A0A0B4J276 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV25A0A0B4J276 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV25A0A0B4J276 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAV25A0A0B4J276 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.71■□□□□ 0.91
TRAV25A0A0B4J276 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV25A0A0B4J276 AL133380.1-201ENST00000506013 324 ntBASIC20.69■□□□□ 0.9
TRAV25A0A0B4J276 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV25A0A0B4J276 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV25A0A0B4J276 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV25A0A0B4J276 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV25A0A0B4J276 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV25A0A0B4J276 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV25A0A0B4J276 AC097358.2-201ENST00000607541 1159 ntBASIC20.67■□□□□ 0.9
TRAV25A0A0B4J276 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.67■□□□□ 0.9
TRAV25A0A0B4J276 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV25A0A0B4J276 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV25A0A0B4J276 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV25A0A0B4J276 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TRAV25A0A0B4J276 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV25A0A0B4J276 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV25A0A0B4J276 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV25A0A0B4J276 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAV25A0A0B4J276 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV25A0A0B4J276 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV25A0A0B4J276 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV25A0A0B4J276 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV25A0A0B4J276 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV25A0A0B4J276 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAV25A0A0B4J276 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRAV25A0A0B4J276 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAV25A0A0B4J276 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TRAV25A0A0B4J276 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAV25A0A0B4J276 AC136428.2-201ENST00000563187 214 ntBASIC20.59■□□□□ 0.89
TRAV25A0A0B4J276 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.59■□□□□ 0.89
TRAV25A0A0B4J276 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.58■□□□□ 0.89
TRAV25A0A0B4J276 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV25A0A0B4J276 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRAV25A0A0B4J276 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
TRAV25A0A0B4J276 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAV25A0A0B4J276 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV25A0A0B4J276 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TRAV25A0A0B4J276 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAV25A0A0B4J276 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV25A0A0B4J276 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV25A0A0B4J276 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV25A0A0B4J276 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV25A0A0B4J276 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV25A0A0B4J276 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV25A0A0B4J276 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAV25A0A0B4J276 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV25A0A0B4J276 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV25A0A0B4J276 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.51■□□□□ 0.87
TRAV25A0A0B4J276 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.5■□□□□ 0.87
TRAV25A0A0B4J276 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV25A0A0B4J276 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAV25A0A0B4J276 WASH5P-204ENST00000632292 975 ntBASIC20.49■□□□□ 0.87
TRAV25A0A0B4J276 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAV25A0A0B4J276 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV25A0A0B4J276 AL391121.1-201ENST00000607967 1349 ntBASIC20.49■□□□□ 0.87
TRAV25A0A0B4J276 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV25A0A0B4J276 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV25A0A0B4J276 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
TRAV25A0A0B4J276 AC120057.4-201ENST00000624722 1615 ntBASIC20.47■□□□□ 0.87
TRAV25A0A0B4J276 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.47■□□□□ 0.87
TRAV25A0A0B4J276 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV25A0A0B4J276 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.46■□□□□ 0.87
TRAV25A0A0B4J276 CAHM-201ENST00000604200 896 ntBASIC20.46■□□□□ 0.87
TRAV25A0A0B4J276 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV25A0A0B4J276 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV25A0A0B4J276 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.44■□□□□ 0.86
TRAV25A0A0B4J276 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.43■□□□□ 0.86
TRAV25A0A0B4J276 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.42■□□□□ 0.86
TRAV25A0A0B4J276 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms