Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV12-1A0A0B4J245 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.71■□□□□ 0.75
TRAV12-1A0A0B4J245 ABCB10P1-201ENST00000614297 2181 ntBASIC19.71■□□□□ 0.75
TRAV12-1A0A0B4J245 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV12-1A0A0B4J245 ABCB10P3-201ENST00000561950 2166 ntBASIC19.7■□□□□ 0.74
TRAV12-1A0A0B4J245 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV12-1A0A0B4J245 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAV12-1A0A0B4J245 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV12-1A0A0B4J245 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV12-1A0A0B4J245 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV12-1A0A0B4J245 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV12-1A0A0B4J245 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV12-1A0A0B4J245 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRAV12-1A0A0B4J245 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAV12-1A0A0B4J245 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV12-1A0A0B4J245 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV12-1A0A0B4J245 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV12-1A0A0B4J245 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV12-1A0A0B4J245 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV12-1A0A0B4J245 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV12-1A0A0B4J245 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC19.6■□□□□ 0.73
TRAV12-1A0A0B4J245 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV12-1A0A0B4J245 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV12-1A0A0B4J245 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.59■□□□□ 0.73
TRAV12-1A0A0B4J245 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV12-1A0A0B4J245 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV12-1A0A0B4J245 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV12-1A0A0B4J245 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV12-1A0A0B4J245 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV12-1A0A0B4J245 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAV12-1A0A0B4J245 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV12-1A0A0B4J245 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV12-1A0A0B4J245 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRAV12-1A0A0B4J245 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV12-1A0A0B4J245 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV12-1A0A0B4J245 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV12-1A0A0B4J245 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
TRAV12-1A0A0B4J245 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV12-1A0A0B4J245 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV12-1A0A0B4J245 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV12-1A0A0B4J245 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV12-1A0A0B4J245 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV12-1A0A0B4J245 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV12-1A0A0B4J245 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV12-1A0A0B4J245 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRAV12-1A0A0B4J245 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.49■□□□□ 0.71
TRAV12-1A0A0B4J245 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRAV12-1A0A0B4J245 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV12-1A0A0B4J245 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV12-1A0A0B4J245 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV12-1A0A0B4J245 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV12-1A0A0B4J245 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV12-1A0A0B4J245 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV12-1A0A0B4J245 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV12-1A0A0B4J245 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
TRAV12-1A0A0B4J245 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV12-1A0A0B4J245 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV12-1A0A0B4J245 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV12-1A0A0B4J245 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV12-1A0A0B4J245 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV12-1A0A0B4J245 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.39■□□□□ 0.7
TRAV12-1A0A0B4J245 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV12-1A0A0B4J245 AC139426.1-201ENST00000568218 2529 ntBASIC19.39■□□□□ 0.69
TRAV12-1A0A0B4J245 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV12-1A0A0B4J245 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV12-1A0A0B4J245 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV12-1A0A0B4J245 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRAV12-1A0A0B4J245 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAV12-1A0A0B4J245 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRAV12-1A0A0B4J245 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV12-1A0A0B4J245 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
TRAV12-1A0A0B4J245 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV12-1A0A0B4J245 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
TRAV12-1A0A0B4J245 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV12-1A0A0B4J245 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV12-1A0A0B4J245 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.31■□□□□ 0.68
TRAV12-1A0A0B4J245 AC120057.4-201ENST00000624722 1615 ntBASIC19.31■□□□□ 0.68
TRAV12-1A0A0B4J245 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.3■□□□□ 0.68
TRAV12-1A0A0B4J245 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV12-1A0A0B4J245 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV12-1A0A0B4J245 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TRAV12-1A0A0B4J245 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
TRAV12-1A0A0B4J245 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
TRAV12-1A0A0B4J245 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV12-1A0A0B4J245 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV12-1A0A0B4J245 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV12-1A0A0B4J245 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV12-1A0A0B4J245 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV12-1A0A0B4J245 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV12-1A0A0B4J245 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV12-1A0A0B4J245 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV12-1A0A0B4J245 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV12-1A0A0B4J245 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV12-1A0A0B4J245 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV12-1A0A0B4J245 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRAV12-1A0A0B4J245 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRAV12-1A0A0B4J245 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV12-1A0A0B4J245 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
TRAV12-1A0A0B4J245 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRAV12-1A0A0B4J245 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms