Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAV8-3A0A0A6YYJ7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV8-3A0A0A6YYJ7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV8-3A0A0A6YYJ7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV8-3A0A0A6YYJ7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV8-3A0A0A6YYJ7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV8-3A0A0A6YYJ7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TRAV8-3A0A0A6YYJ7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAV8-3A0A0A6YYJ7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV8-3A0A0A6YYJ7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV8-3A0A0A6YYJ7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV8-3A0A0A6YYJ7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV8-3A0A0A6YYJ7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV8-3A0A0A6YYJ7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV8-3A0A0A6YYJ7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRAV8-3A0A0A6YYJ7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TRAV8-3A0A0A6YYJ7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV8-3A0A0A6YYJ7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV8-3A0A0A6YYJ7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV8-3A0A0A6YYJ7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.32■□□□□ 0.68
TRAV8-3A0A0A6YYJ7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV8-3A0A0A6YYJ7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV8-3A0A0A6YYJ7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV8-3A0A0A6YYJ7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.31■□□□□ 0.68
TRAV8-3A0A0A6YYJ7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV8-3A0A0A6YYJ7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV8-3A0A0A6YYJ7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV8-3A0A0A6YYJ7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV8-3A0A0A6YYJ7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.27■□□□□ 0.68
TRAV8-3A0A0A6YYJ7 AP002365.1-201ENST00000603448 772 ntBASIC19.27■□□□□ 0.68
TRAV8-3A0A0A6YYJ7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV8-3A0A0A6YYJ7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV8-3A0A0A6YYJ7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV8-3A0A0A6YYJ7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV8-3A0A0A6YYJ7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRAV8-3A0A0A6YYJ7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.17■□□□□ 0.66
TRAV8-3A0A0A6YYJ7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAV8-3A0A0A6YYJ7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV8-3A0A0A6YYJ7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV8-3A0A0A6YYJ7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV8-3A0A0A6YYJ7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV8-3A0A0A6YYJ7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV8-3A0A0A6YYJ7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV8-3A0A0A6YYJ7 DYNLL1-208ENST00000550178 581 ntBASIC19.15■□□□□ 0.66
TRAV8-3A0A0A6YYJ7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV8-3A0A0A6YYJ7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV8-3A0A0A6YYJ7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV8-3A0A0A6YYJ7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAV8-3A0A0A6YYJ7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
TRAV8-3A0A0A6YYJ7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV8-3A0A0A6YYJ7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV8-3A0A0A6YYJ7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV8-3A0A0A6YYJ7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV8-3A0A0A6YYJ7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRAV8-3A0A0A6YYJ7 ABCB10P1-201ENST00000614297 2181 ntBASIC19.08■□□□□ 0.65
TRAV8-3A0A0A6YYJ7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.08■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.07■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.05■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.05■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV8-3A0A0A6YYJ7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV8-3A0A0A6YYJ7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV8-3A0A0A6YYJ7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV8-3A0A0A6YYJ7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV8-3A0A0A6YYJ7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV8-3A0A0A6YYJ7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV8-3A0A0A6YYJ7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV8-3A0A0A6YYJ7 AL031258.1-201ENST00000623562 325 ntBASIC19■□□□□ 0.63
TRAV8-3A0A0A6YYJ7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms