Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.492e-7■■■□□ 15.3
FUBP3Q96I24 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC8.05□□□□□ -1.122e-7■■■□□ 15.3
FUBP3Q96I24 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.15□□□□□ -1.272e-7■■■□□ 15.3
FUBP3Q96I24 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.312e-7■■■□□ 15.3
FUBP3Q96I24 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.332e-7■■■□□ 15.3
FUBP3Q96I24 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.589e-9■■■□□ 15.3
FUBP3Q96I24 AC006153.1-201ENST00000480135 371 ntTSL 3 BASIC9.18□□□□□ -0.942e-6■■■□□ 15.3
FUBP3Q96I24 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.192e-6■■■□□ 15.3
FUBP3Q96I24 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.532e-6■■■□□ 15.3
FUBP3Q96I24 CLDN12-210ENST00000483862 338 ntTSL 25.3□□□□□ -1.562e-6■■■□□ 15.3
FUBP3Q96I24 CLDN12-206ENST00000451941 527 ntTSL 35.28□□□□□ -1.562e-6■■■□□ 15.3
FUBP3Q96I24 CLDN12-214ENST00000498033 420 ntTSL 35.22□□□□□ -1.572e-6■■■□□ 15.3
FUBP3Q96I24 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.19□□□□□ -0.144e-8■■■□□ 15.3
FUBP3Q96I24 AFDN-220ENST00000511503 1257 ntTSL 29.92□□□□□ -0.824e-8■■■□□ 15.3
FUBP3Q96I24 AFDN-222ENST00000515794 746 ntTSL 39.92□□□□□ -0.824e-8■■■□□ 15.3
FUBP3Q96I24 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.312e-9■■■□□ 15.2
FUBP3Q96I24 HNRNPC-207ENST00000553614 604 ntTSL 59.67□□□□□ -0.861e-9■■■□□ 15.2
FUBP3Q96I24 SOX9-201ENST00000245479 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.622e-14■■■□□ 15.2
FUBP3Q96I24 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.487e-7■■■□□ 15.2
FUBP3Q96I24 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.124e-7■■■□□ 15.2
FUBP3Q96I24 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.121e-11■■■□□ 15.2
FUBP3Q96I24 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.53■□□□□ 0.882e-9■■■□□ 15.2
FUBP3Q96I24 RTN4-215ENST00000491592 860 ntTSL 25.37□□□□□ -1.552e-9■■■□□ 15.2
FUBP3Q96I24 RTN4-213ENST00000485749 832 ntTSL 25.16□□□□□ -1.582e-9■■■□□ 15.2
FUBP3Q96I24 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.594e-6■■■□□ 15.2
FUBP3Q96I24 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.9□□□□□ -1.784e-6■■■□□ 15.2
FUBP3Q96I24 QKI-204ENST00000361758 6085 ntTSL 522.2■■□□□ 1.141e-7■■■□□ 15.2
FUBP3Q96I24 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.411e-7■■■□□ 15.2
FUBP3Q96I24 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.26■■■□□ 2.434e-7■■■□□ 15.1
FUBP3Q96I24 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.684e-7■■■□□ 15.1
FUBP3Q96I24 AGAP1-214ENST00000635100 2478 ntTSL 515.28■□□□□ 0.044e-7■■■□□ 15.1
FUBP3Q96I24 SON-217ENST00000478183 1818 ntTSL 1 (best)9.77□□□□□ -0.851e-6■■■□□ 15.1
FUBP3Q96I24 TSN-204ENST00000467324 2843 ntTSL 513.61□□□□□ -0.231e-9■■■□□ 15.1
FUBP3Q96I24 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.48□□□□□ -0.251e-9■■■□□ 15.1
FUBP3Q96I24 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.371e-9■■■□□ 15.1
FUBP3Q96I24 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.873e-7■■■□□ 15.1
FUBP3Q96I24 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.497e-7■■■□□ 15.1
FUBP3Q96I24 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.58□□□□□ -1.527e-7■■■□□ 15.1
FUBP3Q96I24 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.5□□□□□ -1.537e-7■■■□□ 15.1
FUBP3Q96I24 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.57□□□□□ -1.847e-7■■■□□ 15.1
FUBP3Q96I24 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.042e-9■■■□□ 15.1
FUBP3Q96I24 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.426e-8■■■□□ 15
FUBP3Q96I24 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.056e-8■■■□□ 15
FUBP3Q96I24 TMEM263-207ENST00000551237 795 ntTSL 35.36□□□□□ -1.556e-8■■■□□ 15
FUBP3Q96I24 TMEM263-205ENST00000548806 644 ntTSL 23.91□□□□□ -1.786e-8■■■□□ 15
FUBP3Q96I24 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.01■■□□□ 1.114e-6■■■□□ 15
FUBP3Q96I24 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.474e-6■■■□□ 15
FUBP3Q96I24 CCNL1-226ENST00000631619 2457 ntTSL 517.78■□□□□ 0.444e-6■■■□□ 15
FUBP3Q96I24 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.034e-6■■■□□ 15
FUBP3Q96I24 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.34□□□□□ -0.111e-8■■■□□ 15
FUBP3Q96I24 CCNL1-216ENST00000475298 2362 ntTSL 1 (best)12.82□□□□□ -0.364e-6■■■□□ 15
FUBP3Q96I24 STAU1-203ENST00000360426 3211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.514e-6■■■□□ 15
FUBP3Q96I24 STAU1-205ENST00000371802 3154 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.574e-6■■■□□ 15
FUBP3Q96I24 STAU1-201ENST00000340954 3334 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.714e-6■■■□□ 15
FUBP3Q96I24 STAU1-202ENST00000347458 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.754e-6■■■□□ 15
FUBP3Q96I24 STAU1-204ENST00000371792 3130 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.754e-6■■■□□ 15
FUBP3Q96I24 STAU1-207ENST00000371856 3684 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.864e-6■■■□□ 15
FUBP3Q96I24 STAU1-206ENST00000371828 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.894e-6■■■□□ 15
FUBP3Q96I24 MRPL19-202ENST00000393909 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.891e-6■■■□□ 15
FUBP3Q96I24 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.994e-6■■■□□ 15
FUBP3Q96I24 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.351e-8■■■□□ 15
FUBP3Q96I24 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.94□□□□□ -1.621e-8■■■□□ 15
FUBP3Q96I24 CCNL1-215ENST00000474539 4799 ntTSL 1 (best)4.8□□□□□ -1.644e-6■■■□□ 15
FUBP3Q96I24 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.7□□□□□ -1.664e-6■■■□□ 15
FUBP3Q96I24 POLR2B-208ENST00000478188 3093 ntTSL 24.53□□□□□ -1.681e-8■■■□□ 15
FUBP3Q96I24 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.741e-8■■■□□ 15
FUBP3Q96I24 CCNL1-204ENST00000464316 3843 ntTSL 1 (best)3.68□□□□□ -1.824e-6■■■□□ 15
FUBP3Q96I24 CCNL1-214ENST00000471247 3671 ntTSL 1 (best)2.85□□□□□ -1.954e-6■■■□□ 15
FUBP3Q96I24 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.216e-7■■■□□ 15
FUBP3Q96I24 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.48■□□□□ 0.557e-8■■■□□ 15
FUBP3Q96I24 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.017e-8■■■□□ 15
FUBP3Q96I24 EPB41L2-206ENST00000452150 2994 ntTSL 1 (best)8.03□□□□□ -1.123e-8■■■□□ 15
FUBP3Q96I24 PPM1B-203ENST00000378540 1703 ntTSL 224.35■■□□□ 1.491e-6■■■□□ 15
FUBP3Q96I24 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.011e-6■■■□□ 15
FUBP3Q96I24 PPM1B-210ENST00000487286 535 ntTSL 48.07□□□□□ -1.121e-6■■■□□ 15
FUBP3Q96I24 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.132e-7■■■□□ 15
FUBP3Q96I24 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.65□□□□□ -1.512e-7■■■□□ 15
FUBP3Q96I24 ALCAM-203ENST00000465413 2496 ntTSL 25.19□□□□□ -1.582e-7■■■□□ 15
FUBP3Q96I24 ALCAM-209ENST00000491388 2845 ntTSL 23.69□□□□□ -1.822e-7■■■□□ 15
FUBP3Q96I24 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.78■■□□□ 1.44e-7■■■□□ 15
FUBP3Q96I24 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.01□□□□□ -0.011e-6■■■□□ 14.9
FUBP3Q96I24 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.381e-6■■■□□ 14.9
FUBP3Q96I24 MRPL19-204ENST00000453233 475 ntTSL 36.4□□□□□ -1.381e-6■■■□□ 14.9
FUBP3Q96I24 MRPL19-206ENST00000492255 359 ntTSL 36.04□□□□□ -1.441e-6■■■□□ 14.9
FUBP3Q96I24 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.361e-6■■■□□ 14.9
FUBP3Q96I24 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.5□□□□□ -1.691e-6■■■□□ 14.9
FUBP3Q96I24 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.163e-6■■■□□ 14.9
FUBP3Q96I24 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.264e-7■■■□□ 14.9
FUBP3Q96I24 PAPD5-204ENST00000562717 1866 ntTSL 515.29■□□□□ 0.044e-7■■■□□ 14.9
FUBP3Q96I24 PAPD5-201ENST00000357464 7233 ntTSL 56.85□□□□□ -1.314e-7■■■□□ 14.9
FUBP3Q96I24 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC12.59□□□□□ -0.392e-7■■■□□ 14.9
FUBP3Q96I24 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.261e-16■■■□□ 14.9
FUBP3Q96I24 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.192e-6■■■□□ 14.8
FUBP3Q96I24 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC10.59□□□□□ -0.712e-7■■■□□ 14.8
FUBP3Q96I24 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.77□□□□□ -0.046e-8■■■□□ 14.8
FUBP3Q96I24 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.076e-8■■■□□ 14.8
FUBP3Q96I24 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.195e-6■■■□□ 14.8
FUBP3Q96I24 AHNAK-208ENST00000533365 584 ntAPPRIS ALT2 TSL 520.58■□□□□ 0.894e-7■■■□□ 14.8
FUBP3Q96I24 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.194e-7■■■□□ 14.8
FUBP3Q96I24 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.024e-7■■■□□ 14.8
Retrieved 100 of 4,568 protein–RNA pairs in 231.2 ms