RNA–Protein interactions for RNA: ENST00000360426.8

STAU1-203, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene STAU1, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-203ENST00000360426 NISCHQ9Y2I1 1504 aa24.68■■□□□ 1.54
STAU1-203ENST00000360426 SHROOM4Q9ULL8 1493 aa21.96■■□□□ 1.11
STAU1-203ENST00000360426 DCAF8L2P0C7V8 631 aa21.89■■□□□ 1.09
STAU1-203ENST00000360426 SUPT5HO00267 1087 aaKnown RBP21.37■■□□□ 1.01
STAU1-203ENST00000360426 ZCCHC6Q5VYS8 1495 aaKnown RBP20.71■□□□□ 0.91
STAU1-203ENST00000360426 CCDC180Q9P1Z9 1646 aa20.59■□□□□ 0.89
STAU1-203ENST00000360426 ABCC9O60706 1549 aa20.48■□□□□ 0.87
STAU1-203ENST00000360426 EHMT2Q96KQ7 1210 aa20.25■□□□□ 0.83
STAU1-203ENST00000360426 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
STAU1-203ENST00000360426 SCRIBQ14160 1630 aa20.11■□□□□ 0.81
STAU1-203ENST00000360426 MYO15BQ96JP2 1530 aa19.99■□□□□ 0.79
STAU1-203ENST00000360426 LOC105371045A0A1W2PR82 267 aa19.98■□□□□ 0.79
STAU1-203ENST00000360426 FAM9AQ8IZU1 332 aaPredicted RBP19.95■□□□□ 0.78
STAU1-203ENST00000360426 PABPN1Q86U42 306 aaKnown RBP eCLIP19.87■□□□□ 0.77
STAU1-203ENST00000360426 CECR2Q9BXF3 1484 aa19.71■□□□□ 0.75
STAU1-203ENST00000360426 DCAF1Q9Y4B6 1507 aa19.7■□□□□ 0.74
STAU1-203ENST00000360426 RSF1Q96T23 1441 aaPredicted RBP19.63■□□□□ 0.73
STAU1-203ENST00000360426 PCGF6Q9BYE7 350 aa19.59■□□□□ 0.73
STAU1-203ENST00000360426 TRIM41Q8WV44 630 aa19.56■□□□□ 0.72
STAU1-203ENST00000360426 PPARGC1BQ86YN6 1023 aaKnown RBP19.5■□□□□ 0.71
STAU1-203ENST00000360426 RB1CC1Q8TDY2 1594 aa19.45■□□□□ 0.7
STAU1-203ENST00000360426 MROH2BQ7Z745 1585 aa19.43■□□□□ 0.7
STAU1-203ENST00000360426 TTBK1Q5TCY1 1321 aaPredicted RBP19.39■□□□□ 0.7
STAU1-203ENST00000360426 NACADO15069 1562 aa19.33■□□□□ 0.69
STAU1-203ENST00000360426 WIZO95785 1651 aa19.29■□□□□ 0.68
STAU1-203ENST00000360426 RANGAP1P46060 587 aaPredicted RBP19.17■□□□□ 0.66
STAU1-203ENST00000360426 ABCC8Q09428 1581 aa18.99■□□□□ 0.63
STAU1-203ENST00000360426 UNC13AQ9UPW8 1703 aa18.94■□□□□ 0.62
STAU1-203ENST00000360426 CCDC88BA6NC98 1476 aa18.89■□□□□ 0.62
STAU1-203ENST00000360426 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.61
STAU1-203ENST00000360426 HRCP23327 699 aa18.88■□□□□ 0.61
STAU1-203ENST00000360426 UBTFP17480 764 aaKnown RBP18.84■□□□□ 0.61
STAU1-203ENST00000360426 BICRAQ9NZM4 1560 aa18.83■□□□□ 0.6
STAU1-203ENST00000360426 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
STAU1-203ENST00000360426 SOGA1O94964 1423 aa18.79■□□□□ 0.6
STAU1-203ENST00000360426 RUSC2Q8N2Y8 1516 aa18.77■□□□□ 0.59
STAU1-203ENST00000360426 TRIM26Q12899 539 aaPredicted RBP18.76■□□□□ 0.59
STAU1-203ENST00000360426 SMARCA2P51531 1590 aa18.67■□□□□ 0.58
STAU1-203ENST00000360426 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
STAU1-203ENST00000360426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.62■□□□□ 0.57
STAU1-203ENST00000360426 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
STAU1-203ENST00000360426 BAZ1BQ9UIG0 1483 aaKnown RBP18.57■□□□□ 0.56
STAU1-203ENST00000360426 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
STAU1-203ENST00000360426 DNAJC5BQ9UF47 199 aa18.53■□□□□ 0.56
STAU1-203ENST00000360426 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
STAU1-203ENST00000360426 EIF4G1Q04637 1599 aaKnown RBP18.43■□□□□ 0.54
STAU1-203ENST00000360426 HNRNPUL2Q1KMD3 747 aaKnown RBP18.4■□□□□ 0.54
STAU1-203ENST00000360426 CEP162Q5TB80 1403 aa18.38■□□□□ 0.53
STAU1-203ENST00000360426 CCER1Q8TC90 406 aaPredicted RBP18.37■□□□□ 0.53
STAU1-203ENST00000360426 SYNJ1O43426 1573 aa18.35■□□□□ 0.53
STAU1-203ENST00000360426 P3H3Q8IVL6 736 aa18.28■□□□□ 0.52
STAU1-203ENST00000360426 ATP1B4Q9UN42 357 aaPredicted RBP18.27■□□□□ 0.52
STAU1-203ENST00000360426 ITGAEP38570 1179 aa18.24■□□□□ 0.51
STAU1-203ENST00000360426 RAPGEF2Q9Y4G8 1499 aa18.23■□□□□ 0.51
STAU1-203ENST00000360426 APLP2Q06481 763 aa18.16■□□□□ 0.5
STAU1-203ENST00000360426 TNIKQ9UKE5 1360 aa18.14■□□□□ 0.49
STAU1-203ENST00000360426 NESP48681 1621 aa18.11■□□□□ 0.49
STAU1-203ENST00000360426 CLIP1P30622 1438 aa18.11■□□□□ 0.49
STAU1-203ENST00000360426 GOLGA3Q08378 1498 aa18.11■□□□□ 0.49
STAU1-203ENST00000360426 PEG3Q9GZU2 1588 aa18.11■□□□□ 0.49
STAU1-203ENST00000360426 NCAPD3P42695 1498 aa18.06■□□□□ 0.48
STAU1-203ENST00000360426 KANK4Q5T7N3 995 aaPredicted RBP18.06■□□□□ 0.48
STAU1-203ENST00000360426 ARID3CA6NKF2 412 aa18.05■□□□□ 0.48
STAU1-203ENST00000360426 CUX1P39880 1505 aa18.03■□□□□ 0.48
STAU1-203ENST00000360426 CC2D2AQ9P2K1 1620 aa18.01■□□□□ 0.47
STAU1-203ENST00000360426 CEP164Q9UPV0 1460 aa17.99■□□□□ 0.47
STAU1-203ENST00000360426 CUX2O14529 1486 aa17.97■□□□□ 0.47
STAU1-203ENST00000360426 CADPSQ9ULU8 1353 aa17.94■□□□□ 0.46
STAU1-203ENST00000360426 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
STAU1-203ENST00000360426 EEA1Q15075 1411 aa17.93■□□□□ 0.46
STAU1-203ENST00000360426 CFTRP13569 1480 aa17.91■□□□□ 0.46
STAU1-203ENST00000360426 ZEB1P37275 1124 aaPredicted RBP17.89■□□□□ 0.45
STAU1-203ENST00000360426 TDRD9Q8NDG6 1382 aaKnown RBP17.88■□□□□ 0.45
STAU1-203ENST00000360426 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
STAU1-203ENST00000360426 KIF27Q86VH2 1401 aa17.87■□□□□ 0.45
STAU1-203ENST00000360426 HMGXB3Q12766 1538 aa17.85■□□□□ 0.45
STAU1-203ENST00000360426 FGD5Q6ZNL6 1462 aa17.84■□□□□ 0.45
STAU1-203ENST00000360426 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
STAU1-203ENST00000360426 IGF1RP08069 1367 aa17.81■□□□□ 0.44
STAU1-203ENST00000360426 VPS8Q8N3P4 1428 aa17.81■□□□□ 0.44
STAU1-203ENST00000360426 ARAP1Q96P48 1450 aa17.8■□□□□ 0.44
STAU1-203ENST00000360426 KIF21BO75037 1637 aa17.8■□□□□ 0.44
STAU1-203ENST00000360426 YTHDC1Q96MU7 727 aaKnown RBP17.8■□□□□ 0.44
STAU1-203ENST00000360426 FAM50AQ14320 339 aaKnown RBP17.79■□□□□ 0.44
STAU1-203ENST00000360426 CARMIL1Q5VZK9 1371 aa17.78■□□□□ 0.44
STAU1-203ENST00000360426 PRXQ9BXM0 1461 aa17.74■□□□□ 0.43
STAU1-203ENST00000360426 FBLN2P98095 1184 aa17.72■□□□□ 0.43
STAU1-203ENST00000360426 DIEXFQ68CQ4 756 aaKnown RBP17.69■□□□□ 0.42
STAU1-203ENST00000360426 FHOD3Q2V2M9 1422 aa17.67■□□□□ 0.42
STAU1-203ENST00000360426 BIVM-ERCC5R4GMW8 1640 aa17.66■□□□□ 0.42
STAU1-203ENST00000360426 PELP1Q8IZL8 1130 aaKnown RBP17.66■□□□□ 0.42
STAU1-203ENST00000360426 ARHGAP35Q9NRY4 1499 aa17.65■□□□□ 0.42
STAU1-203ENST00000360426 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
STAU1-203ENST00000360426 NEUROD1Q13562 356 aa17.62■□□□□ 0.41
STAU1-203ENST00000360426 HIRIP3Q9BW71 556 aaPredicted RBP17.6■□□□□ 0.41
STAU1-203ENST00000360426 TOPBP1Q92547 1522 aa17.59■□□□□ 0.41
STAU1-203ENST00000360426 AQRO60306 1485 aaKnown RBP eCLIP17.57■□□□□ 0.42e-7■■■■■ 31.4
STAU1-203ENST00000360426 URB2Q14146 1524 aaKnown RBP17.56■□□□□ 0.4
STAU1-203ENST00000360426 CHIC2Q9UKJ5 165 aa17.54■□□□□ 0.4
STAU1-203ENST00000360426 SIN3AQ96ST3 1273 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms