RNA–Protein interactions for RNA: ENST00000498033.5

CLDN12-214, Transcript of claudin 12, humanhuman

TSL 3

Gene CLDN12, Length 420 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-214ENST00000498033 AEBP2Q6ZN18 517 aaPredicted RBP16.96■□□□□ 0.31
CLDN12-214ENST00000498033 CHIC1Q5VXU3 224 aa16.15■□□□□ 0.18
CLDN12-214ENST00000498033 SENP3Q9H4L4 574 aaPredicted RBP14.51□□□□□ -0.09
CLDN12-214ENST00000498033 PHF23Q9BUL5 403 aaPredicted RBP14.29□□□□□ -0.12
CLDN12-214ENST00000498033 FOXD1Q16676 465 aa13.48□□□□□ -0.25
CLDN12-214ENST00000498033 NISCHQ9Y2I1 1504 aa13.01□□□□□ -0.33
CLDN12-214ENST00000498033 PLPPR3Q6T4P5 718 aa12.92□□□□□ -0.34
CLDN12-214ENST00000498033 ABCC9O60706 1549 aa12.68□□□□□ -0.38
CLDN12-214ENST00000498033 MSH5O43196 834 aa12.66□□□□□ -0.38
CLDN12-214ENST00000498033 PIAS4Q8N2W9 510 aaPredicted RBP12.61□□□□□ -0.39
CLDN12-214ENST00000498033 PPP6R1Q9UPN7 881 aa12.6□□□□□ -0.39
CLDN12-214ENST00000498033 ADRA2BP18089 450 aa12.56□□□□□ -0.4
CLDN12-214ENST00000498033 DNAJC5BQ9UF47 199 aa12.44□□□□□ -0.42
CLDN12-214ENST00000498033 POTEDQ86YR6 584 aa12.29□□□□□ -0.44
CLDN12-214ENST00000498033 DNAJC5Q9H3Z4 198 aa11.87□□□□□ -0.51
CLDN12-214ENST00000498033 CCDC180Q9P1Z9 1646 aa11.86□□□□□ -0.51
CLDN12-214ENST00000498033 PABPN1Q86U42 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
CLDN12-214ENST00000498033 RB1CC1Q8TDY2 1594 aa11.68□□□□□ -0.54
CLDN12-214ENST00000498033 SCAF1Q9H7N4 1312 aaKnown RBP11.56□□□□□ -0.56
CLDN12-214ENST00000498033 MAPK8IP2Q13387 824 aaPredicted RBP11.52□□□□□ -0.57
CLDN12-214ENST00000498033 DMRT2Q9Y5R5 561 aa11.5□□□□□ -0.57
CLDN12-214ENST00000498033 CECR2Q9BXF3 1484 aa11.47□□□□□ -0.57
CLDN12-214ENST00000498033 DCAF8L2P0C7V8 631 aa11.46□□□□□ -0.57
CLDN12-214ENST00000498033 NACADO15069 1562 aa11.42□□□□□ -0.58
CLDN12-214ENST00000498033 BICRAQ9NZM4 1560 aa11.33□□□□□ -0.6
CLDN12-214ENST00000498033 CC2D2AQ9P2K1 1620 aa11.33□□□□□ -0.6
CLDN12-214ENST00000498033 PPP4R3CPQ6ZMV5 832 aa11.3□□□□□ -0.6
CLDN12-214ENST00000498033 UNC13AQ9UPW8 1703 aa11.28□□□□□ -0.6
CLDN12-214ENST00000498033 TRIM41Q8WV44 630 aa11.23□□□□□ -0.61
CLDN12-214ENST00000498033 EIF4G1Q04637 1599 aaKnown RBP11.16□□□□□ -0.62
CLDN12-214ENST00000498033 CUX2O14529 1486 aa11.12□□□□□ -0.63
CLDN12-214ENST00000498033 CNKSR2Q8WXI2 1034 aa11.11□□□□□ -0.63
CLDN12-214ENST00000498033 SHROOM4Q9ULL8 1493 aa11.11□□□□□ -0.63
CLDN12-214ENST00000498033 HOXD11P31277 338 aaPredicted RBP11.09□□□□□ -0.63
CLDN12-214ENST00000498033 ERCC6Q03468 1493 aa11.02□□□□□ -0.65
CLDN12-214ENST00000498033 RNF216Q9NWF9 866 aaPredicted RBP11.02□□□□□ -0.65
CLDN12-214ENST00000498033 MYO15BQ96JP2 1530 aa11□□□□□ -0.65
CLDN12-214ENST00000498033 DCAF8L1A6NGE4 600 aa10.98□□□□□ -0.65
CLDN12-214ENST00000498033 SCRIBQ14160 1630 aa10.92□□□□□ -0.66
CLDN12-214ENST00000498033 NCBP3Q53F19 620 aaKnown RBP10.91□□□□□ -0.66
CLDN12-214ENST00000498033 CACNB1Q02641 598 aaPredicted RBP10.82□□□□□ -0.68
CLDN12-214ENST00000498033 RNF39Q9H2S5 420 aa10.79□□□□□ -0.68
CLDN12-214ENST00000498033 NPM3O75607 178 aaKnown RBP10.71□□□□□ -0.69
CLDN12-214ENST00000498033 NESP48681 1621 aa10.69□□□□□ -0.7
CLDN12-214ENST00000498033 C1QBPQ07021 282 aaKnown RBP10.65□□□□□ -0.7
CLDN12-214ENST00000498033 ZCCHC6Q5VYS8 1495 aaKnown RBP10.65□□□□□ -0.7
CLDN12-214ENST00000498033 DCAF1Q9Y4B6 1507 aa10.63□□□□□ -0.71
CLDN12-214ENST00000498033 THOC2Q8NI27 1593 aaKnown RBP10.63□□□□□ -0.71
CLDN12-214ENST00000498033 SMARCA2P51531 1590 aa10.62□□□□□ -0.71
CLDN12-214ENST00000498033 NCAPD3P42695 1498 aa10.57□□□□□ -0.72
CLDN12-214ENST00000498033 TRHP20396 242 aaPredicted RBP10.55□□□□□ -0.72
CLDN12-214ENST00000498033 OSCARQ8IYS5 282 aa10.55□□□□□ -0.72
CLDN12-214ENST00000498033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.54□□□□□ -0.72
CLDN12-214ENST00000498033 BAZ1AQ9NRL2 1556 aaPredicted RBP10.52□□□□□ -0.73
CLDN12-214ENST00000498033 KCNA4P22459 653 aa10.5□□□□□ -0.73
CLDN12-214ENST00000498033 ATAD2BQ9ULI0 1458 aa10.49□□□□□ -0.73
CLDN12-214ENST00000498033 PDS5BQ9NTI5 1447 aa10.46□□□□□ -0.74
CLDN12-214ENST00000498033 KIF21AQ7Z4S6 1674 aa10.43□□□□□ -0.74
CLDN12-214ENST00000498033 RIMBP3CA6NJZ7 1639 aa10.43□□□□□ -0.74
CLDN12-214ENST00000498033 RIMBP3BA6NNM3 1639 aa10.43□□□□□ -0.74
CLDN12-214ENST00000498033 RIMBP3Q9UFD9 1639 aa10.43□□□□□ -0.74
CLDN12-214ENST00000498033 HMGXB3Q12766 1538 aa10.43□□□□□ -0.74
CLDN12-214ENST00000498033 LAMC3Q9Y6N6 1575 aa10.42□□□□□ -0.74
CLDN12-214ENST00000498033 MRC2Q9UBG0 1479 aa10.41□□□□□ -0.74
CLDN12-214ENST00000498033 CYB5RLQ6IPT4 315 aa10.4□□□□□ -0.74
CLDN12-214ENST00000498033 BAZ1BQ9UIG0 1483 aaKnown RBP10.39□□□□□ -0.75
CLDN12-214ENST00000498033 ARHGEF11O15085 1522 aa10.37□□□□□ -0.75
CLDN12-214ENST00000498033 WDR62O43379 1518 aa10.35□□□□□ -0.75
CLDN12-214ENST00000498033 ILDR1Q86SU0 546 aaPredicted RBP10.34□□□□□ -0.75
CLDN12-214ENST00000498033 U3KPZ7 1027 aaPredicted RBP10.33□□□□□ -0.76
CLDN12-214ENST00000498033 SMARCA4P51532 1647 aa10.28□□□□□ -0.76
CLDN12-214ENST00000498033 CADPSQ9ULU8 1353 aa10.26□□□□□ -0.77
CLDN12-214ENST00000498033 ARAP1Q96P48 1450 aa10.23□□□□□ -0.77
CLDN12-214ENST00000498033 CEP164Q9UPV0 1460 aa10.23□□□□□ -0.77
CLDN12-214ENST00000498033 SLC4A2P04920 1241 aa10.22□□□□□ -0.77
CLDN12-214ENST00000498033 FANCD2Q9BXW9 1451 aa10.17□□□□□ -0.78
CLDN12-214ENST00000498033 CAPN15O75808 1086 aa10.14□□□□□ -0.79
CLDN12-214ENST00000498033 SPINK5Q9NQ38 1064 aaPredicted RBP10.14□□□□□ -0.79
CLDN12-214ENST00000498033 PEG3Q9GZU2 1588 aa10.13□□□□□ -0.79
CLDN12-214ENST00000498033 FBLN2P98095 1184 aa10.12□□□□□ -0.79
CLDN12-214ENST00000498033 ZNF608Q9ULD9 1512 aaPredicted RBP10.12□□□□□ -0.79
CLDN12-214ENST00000498033 URB2Q14146 1524 aaKnown RBP10.11□□□□□ -0.79
CLDN12-214ENST00000498033 DSG3P32926 999 aa10.09□□□□□ -0.79
CLDN12-214ENST00000498033 APLP2Q06481 763 aa10.09□□□□□ -0.79
CLDN12-214ENST00000498033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.08□□□□□ -0.8
CLDN12-214ENST00000498033 HNRNPUL2Q1KMD3 747 aaKnown RBP10.08□□□□□ -0.8
CLDN12-214ENST00000498033 RSF1Q96T23 1441 aaPredicted RBP10.07□□□□□ -0.8
CLDN12-214ENST00000498033 IFT140Q96RY7 1462 aa10.04□□□□□ -0.8
CLDN12-214ENST00000498033 MROH2BQ7Z745 1585 aa10.04□□□□□ -0.8
CLDN12-214ENST00000498033 SAMD1Q6SPF0 538 aaPredicted RBP10.01□□□□□ -0.81
CLDN12-214ENST00000498033 ZNF219Q9P2Y4 722 aaPredicted RBP10□□□□□ -0.81
CLDN12-214ENST00000498033 EIF4G3O43432 1585 aaKnown RBP9.99□□□□□ -0.81
CLDN12-214ENST00000498033 CFTRP13569 1480 aa9.98□□□□□ -0.81
CLDN12-214ENST00000498033 CHD1O14646 1710 aa9.98□□□□□ -0.81
CLDN12-214ENST00000498033 AQRO60306 1485 aaKnown RBP eCLIP9.96□□□□□ -0.821e-6■■□□□ 14.5
CLDN12-214ENST00000498033 SLC4A1APQ9BWU0 796 aaKnown RBP9.94□□□□□ -0.82
CLDN12-214ENST00000498033 KDM4FA0A1W2PPD8 638 aa9.93□□□□□ -0.82
CLDN12-214ENST00000498033 MYCNP04198 464 aaPredicted RBP9.93□□□□□ -0.82
CLDN12-214ENST00000498033 GAPVD1Q14C86 1478 aa9.9□□□□□ -0.83
CLDN12-214ENST00000498033 CLASP1Q7Z460 1538 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms