RNA–Protein interactions for RNA: ENST00000451941.6

CLDN12-206, Transcript of claudin 12, humanhuman

TSL 3

Gene CLDN12, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-206ENST00000451941 AEBP2Q6ZN18 517 aaPredicted RBP23.24■■□□□ 1.31
CLDN12-206ENST00000451941 CHIC1Q5VXU3 224 aa21.84■■□□□ 1.09
CLDN12-206ENST00000451941 SENP3Q9H4L4 574 aaPredicted RBP20.03■□□□□ 0.8
CLDN12-206ENST00000451941 PHF23Q9BUL5 403 aaPredicted RBP19.64■□□□□ 0.73
CLDN12-206ENST00000451941 FOXD1Q16676 465 aa18.68■□□□□ 0.58
CLDN12-206ENST00000451941 POTEDQ86YR6 584 aa18.33■□□□□ 0.52
CLDN12-206ENST00000451941 MSH5O43196 834 aa17.8■□□□□ 0.44
CLDN12-206ENST00000451941 PLPPR3Q6T4P5 718 aa17.49■□□□□ 0.39
CLDN12-206ENST00000451941 PIAS4Q8N2W9 510 aaPredicted RBP17.35■□□□□ 0.37
CLDN12-206ENST00000451941 PPP6R1Q9UPN7 881 aa16.96■□□□□ 0.31
CLDN12-206ENST00000451941 ADRA2BP18089 450 aa16.9■□□□□ 0.3
CLDN12-206ENST00000451941 DMRT2Q9Y5R5 561 aa15.76■□□□□ 0.11
CLDN12-206ENST00000451941 MAPK8IP2Q13387 824 aaPredicted RBP15.68■□□□□ 0.1
CLDN12-206ENST00000451941 CACNB1Q02641 598 aaPredicted RBP15.63■□□□□ 0.09
CLDN12-206ENST00000451941 SCAF1Q9H7N4 1312 aaKnown RBP15.58■□□□□ 0.08
CLDN12-206ENST00000451941 PPP4R3CPQ6ZMV5 832 aa15.43■□□□□ 0.06
CLDN12-206ENST00000451941 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
CLDN12-206ENST00000451941 RNF39Q9H2S5 420 aa15.08■□□□□ 0
CLDN12-206ENST00000451941 NCBP3Q53F19 620 aaKnown RBP15.02■□□□□ -0
CLDN12-206ENST00000451941 KCNA4P22459 653 aa15.01□□□□□ -0.01
CLDN12-206ENST00000451941 CNKSR2Q8WXI2 1034 aa14.99□□□□□ -0.01
CLDN12-206ENST00000451941 HOXD11P31277 338 aaPredicted RBP14.93□□□□□ -0.02
CLDN12-206ENST00000451941 C1QBPQ07021 282 aaKnown RBP14.86□□□□□ -0.03
CLDN12-206ENST00000451941 NPM3O75607 178 aaKnown RBP14.77□□□□□ -0.05
CLDN12-206ENST00000451941 RNF216Q9NWF9 866 aaPredicted RBP14.69□□□□□ -0.06
CLDN12-206ENST00000451941 DNAJC5BQ9UF47 199 aa14.57□□□□□ -0.08
CLDN12-206ENST00000451941 SLC4A1APQ9BWU0 796 aaKnown RBP14.3□□□□□ -0.12
CLDN12-206ENST00000451941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.28□□□□□ -0.12
CLDN12-206ENST00000451941 POTEHQ6S545 545 aa14.27□□□□□ -0.13
CLDN12-206ENST00000451941 SLC4A2P04920 1241 aa13.95□□□□□ -0.18
CLDN12-206ENST00000451941 DSG3P32926 999 aa13.91□□□□□ -0.18
CLDN12-206ENST00000451941 CAPN15O75808 1086 aa13.9□□□□□ -0.18
CLDN12-206ENST00000451941 EHMT2Q96KQ7 1210 aa13.87□□□□□ -0.19
CLDN12-206ENST00000451941 U3KPZ7 1027 aaPredicted RBP13.85□□□□□ -0.19
CLDN12-206ENST00000451941 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
CLDN12-206ENST00000451941 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
CLDN12-206ENST00000451941 ZBTB22O15209 634 aa13.77□□□□□ -0.21
CLDN12-206ENST00000451941 CSRNP3Q8WYN3 585 aa13.69□□□□□ -0.22
CLDN12-206ENST00000451941 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
CLDN12-206ENST00000451941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
CLDN12-206ENST00000451941 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
CLDN12-206ENST00000451941 APLP2Q06481 763 aa13.53□□□□□ -0.24
CLDN12-206ENST00000451941 TRHP20396 242 aaPredicted RBP13.52□□□□□ -0.25
CLDN12-206ENST00000451941 SAMD1Q6SPF0 538 aaPredicted RBP13.51□□□□□ -0.25
CLDN12-206ENST00000451941 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
CLDN12-206ENST00000451941 ABCB7O75027 752 aa13.48□□□□□ -0.25
CLDN12-206ENST00000451941 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
CLDN12-206ENST00000451941 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
CLDN12-206ENST00000451941 ATF5Q9Y2D1 282 aaPredicted RBP13.29□□□□□ -0.28
CLDN12-206ENST00000451941 CHRDL2Q6WN34 429 aa13.27□□□□□ -0.29
CLDN12-206ENST00000451941 SP7Q8TDD2 431 aaPredicted RBP13.1□□□□□ -0.31
CLDN12-206ENST00000451941 POLA2Q14181 598 aa13.05□□□□□ -0.32
CLDN12-206ENST00000451941 AKT1S1Q96B36 256 aa12.9□□□□□ -0.34
CLDN12-206ENST00000451941 PIP4P2Q8N4L2 257 aa12.8□□□□□ -0.36
CLDN12-206ENST00000451941 ZBTB12Q9Y330 459 aaPredicted RBP12.8□□□□□ -0.36
CLDN12-206ENST00000451941 HAX1O00165 279 aa12.78□□□□□ -0.36
CLDN12-206ENST00000451941 FBLN2P98095 1184 aa12.77□□□□□ -0.37
CLDN12-206ENST00000451941 REM2Q8IYK8 340 aaPredicted RBP12.75□□□□□ -0.37
CLDN12-206ENST00000451941 MKRN4PQ13434 485 aaPredicted RBP12.7□□□□□ -0.38
CLDN12-206ENST00000451941 FXR2P51116 673 aaKnown RBP eCLIP12.63□□□□□ -0.39
CLDN12-206ENST00000451941 PITPNM1O00562 1244 aa12.61□□□□□ -0.39
CLDN12-206ENST00000451941 OSCARQ8IYS5 282 aa12.6□□□□□ -0.39
CLDN12-206ENST00000451941 EVX2Q03828 476 aa12.47□□□□□ -0.41
CLDN12-206ENST00000451941 SPDYE2BA6NHP3 402 aa12.46□□□□□ -0.41
CLDN12-206ENST00000451941 SPDYE6P0CI01 402 aa12.46□□□□□ -0.41
CLDN12-206ENST00000451941 SPDYE2Q495Y8 402 aa12.46□□□□□ -0.41
CLDN12-206ENST00000451941 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
CLDN12-206ENST00000451941 SPDYE4A6NLX3 237 aa12.42□□□□□ -0.42
CLDN12-206ENST00000451941 FKBP8Q14318 412 aa12.41□□□□□ -0.42
CLDN12-206ENST00000451941 SSUH2Q9Y2M2 353 aa12.33□□□□□ -0.44
CLDN12-206ENST00000451941 PRKAR2AP13861 404 aaKnown RBP12.3□□□□□ -0.44
CLDN12-206ENST00000451941 LHX8Q68G74 356 aa12.28□□□□□ -0.44
CLDN12-206ENST00000451941 PABPN1Q86U42 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
CLDN12-206ENST00000451941 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
CLDN12-206ENST00000451941 SPDYE1Q8NFV5 336 aaPredicted RBP12.22□□□□□ -0.45
CLDN12-206ENST00000451941 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
CLDN12-206ENST00000451941 GABBR2O75899 941 aa12.21□□□□□ -0.45
CLDN12-206ENST00000451941 PROM2Q8N271 834 aa12.14□□□□□ -0.47
CLDN12-206ENST00000451941 STAG3Q9UJ98 1225 aa12.05□□□□□ -0.48
CLDN12-206ENST00000451941 PLSCR2Q9NRY7 297 aa12.03□□□□□ -0.48
CLDN12-206ENST00000451941 CHADLQ6NUI6 762 aa12□□□□□ -0.49
CLDN12-206ENST00000451941 PRR29P0C7W0 189 aa11.97□□□□□ -0.49
CLDN12-206ENST00000451941 FBXO3Q9UK99 471 aa11.97□□□□□ -0.49
CLDN12-206ENST00000451941 POTEIP0CG38 1075 aa11.9□□□□□ -0.5
CLDN12-206ENST00000451941 CLCN6P51797 869 aa11.9□□□□□ -0.5
CLDN12-206ENST00000451941 CD44P16070 742 aaKnown RBP11.89□□□□□ -0.51
CLDN12-206ENST00000451941 MIER1Q8N108 512 aa11.83□□□□□ -0.52
CLDN12-206ENST00000451941 DCBLD2Q96PD2 775 aa11.82□□□□□ -0.52
CLDN12-206ENST00000451941 PLCD3Q8N3E9 789 aa11.8□□□□□ -0.52
CLDN12-206ENST00000451941 VASPP50552 380 aaPredicted RBP11.79□□□□□ -0.52
CLDN12-206ENST00000451941 FARP1Q9Y4F1 1045 aaPredicted RBP11.79□□□□□ -0.52
CLDN12-206ENST00000451941 PLEKHG5O94827 1062 aa11.77□□□□□ -0.53
CLDN12-206ENST00000451941 CREBZFQ9NS37 354 aa11.77□□□□□ -0.53
CLDN12-206ENST00000451941 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
CLDN12-206ENST00000451941 ZNF579Q8NAF0 562 aaKnown RBP11.66□□□□□ -0.54
CLDN12-206ENST00000451941 ZBTB47Q9UFB7 747 aaPredicted RBP11.63□□□□□ -0.55
CLDN12-206ENST00000451941 ZRANB1Q9UGI0 708 aa11.63□□□□□ -0.55
CLDN12-206ENST00000451941 IFNLR1Q8IU57 520 aaPredicted RBP11.62□□□□□ -0.55
CLDN12-206ENST00000451941 NPM1P06748 294 aaKnown RBP eCLIP11.61□□□□□ -0.55
CLDN12-206ENST00000451941 MNX1P50219 401 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms