RNA–Protein interactions for RNA: ENST00000347458.9

STAU1-202, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene STAU1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-202ENST00000347458 NISCHQ9Y2I1 1504 aa20.08■□□□□ 0.8
STAU1-202ENST00000347458 HRCP23327 699 aa18.8■□□□□ 0.6
STAU1-202ENST00000347458 PPARGC1BQ86YN6 1023 aaKnown RBP18.46■□□□□ 0.55
STAU1-202ENST00000347458 PELP1Q8IZL8 1130 aaKnown RBP18.43■□□□□ 0.54
STAU1-202ENST00000347458 PCGF6Q9BYE7 350 aa18.3■□□□□ 0.52
STAU1-202ENST00000347458 MYO15BQ96JP2 1530 aa18.11■□□□□ 0.49
STAU1-202ENST00000347458 SUPT5HO00267 1087 aaKnown RBP18.08■□□□□ 0.48
STAU1-202ENST00000347458 SHROOM4Q9ULL8 1493 aa18.05■□□□□ 0.48
STAU1-202ENST00000347458 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
STAU1-202ENST00000347458 CHIC1Q5VXU3 224 aa17.88■□□□□ 0.45
STAU1-202ENST00000347458 MYT1Q01538 1121 aa17.76■□□□□ 0.43
STAU1-202ENST00000347458 DCAF1Q9Y4B6 1507 aa17.71■□□□□ 0.43
STAU1-202ENST00000347458 DCAF8L2P0C7V8 631 aa17.67■□□□□ 0.42
STAU1-202ENST00000347458 TRIM26Q12899 539 aaPredicted RBP17.61■□□□□ 0.41
STAU1-202ENST00000347458 CCDC180Q9P1Z9 1646 aa17.55■□□□□ 0.4
STAU1-202ENST00000347458 LOC105371045A0A1W2PR82 267 aa17.54■□□□□ 0.4
STAU1-202ENST00000347458 ZEB1P37275 1124 aaPredicted RBP17.5■□□□□ 0.39
STAU1-202ENST00000347458 ACIN1Q9UKV3 1341 aaKnown RBP17.4■□□□□ 0.38
STAU1-202ENST00000347458 NEUROD1Q13562 356 aa17.38■□□□□ 0.37
STAU1-202ENST00000347458 GTF3C3Q9Y5Q9 886 aa17.3■□□□□ 0.36
STAU1-202ENST00000347458 ZCCHC6Q5VYS8 1495 aaKnown RBP17.11■□□□□ 0.33
STAU1-202ENST00000347458 CENPBP07199 599 aaPredicted RBP17.09■□□□□ 0.33
STAU1-202ENST00000347458 DIEXFQ68CQ4 756 aaKnown RBP16.96■□□□□ 0.31
STAU1-202ENST00000347458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.88■□□□□ 0.29
STAU1-202ENST00000347458 CCER1Q8TC90 406 aaPredicted RBP16.81■□□□□ 0.28
STAU1-202ENST00000347458 YTHDC1Q96MU7 727 aaKnown RBP16.74■□□□□ 0.27
STAU1-202ENST00000347458 FAM9AQ8IZU1 332 aaPredicted RBP16.72■□□□□ 0.27
STAU1-202ENST00000347458 TTBK1Q5TCY1 1321 aaPredicted RBP16.71■□□□□ 0.27
STAU1-202ENST00000347458 BCL11AQ9H165 835 aa16.71■□□□□ 0.27
STAU1-202ENST00000347458 TRIM41Q8WV44 630 aa16.7■□□□□ 0.26
STAU1-202ENST00000347458 EHMT2Q96KQ7 1210 aa16.7■□□□□ 0.26
STAU1-202ENST00000347458 ZNF316A6NFI3 1004 aaPredicted RBP16.56■□□□□ 0.24
STAU1-202ENST00000347458 ANP32EQ9BTT0 268 aa16.54■□□□□ 0.24
STAU1-202ENST00000347458 MIER1Q8N108 512 aa16.54■□□□□ 0.24
STAU1-202ENST00000347458 ABCC9O60706 1549 aa16.51■□□□□ 0.23
STAU1-202ENST00000347458 CSRNP3Q8WYN3 585 aa16.41■□□□□ 0.22
STAU1-202ENST00000347458 TSHZ2Q9NRE2 1034 aa16.41■□□□□ 0.22
STAU1-202ENST00000347458 SUPT16HQ9Y5B9 1047 aaKnown RBP16.39■□□□□ 0.21
STAU1-202ENST00000347458 SCRIBQ14160 1630 aa16.28■□□□□ 0.2
STAU1-202ENST00000347458 RSF1Q96T23 1441 aaPredicted RBP16.27■□□□□ 0.2
STAU1-202ENST00000347458 RB1CC1Q8TDY2 1594 aa16.27■□□□□ 0.2
STAU1-202ENST00000347458 CLSPNQ9HAW4 1339 aa16.25■□□□□ 0.19
STAU1-202ENST00000347458 PRKCSHP14314 528 aaPredicted RBP16.2■□□□□ 0.18
STAU1-202ENST00000347458 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
STAU1-202ENST00000347458 PABPN1Q86U42 306 aaKnown RBP eCLIP16.02■□□□□ 0.16
STAU1-202ENST00000347458 BCANQ96GW7 911 aa16.02■□□□□ 0.15
STAU1-202ENST00000347458 CEP162Q5TB80 1403 aa16.01■□□□□ 0.15
STAU1-202ENST00000347458 HNRNPUL2Q1KMD3 747 aaKnown RBP16.01■□□□□ 0.15
STAU1-202ENST00000347458 CECR2Q9BXF3 1484 aa15.99■□□□□ 0.15
STAU1-202ENST00000347458 RBM19Q9Y4C8 960 aaKnown RBP15.99■□□□□ 0.15
STAU1-202ENST00000347458 MSH5O43196 834 aa15.91■□□□□ 0.14
STAU1-202ENST00000347458 FKBP8Q14318 412 aa15.9■□□□□ 0.14
STAU1-202ENST00000347458 KCNH8Q96L42 1107 aa15.88■□□□□ 0.13
STAU1-202ENST00000347458 TNIKQ9UKE5 1360 aa15.86■□□□□ 0.13
STAU1-202ENST00000347458 ITGAEP38570 1179 aa15.79■□□□□ 0.12
STAU1-202ENST00000347458 MROH2BQ7Z745 1585 aa15.78■□□□□ 0.12
STAU1-202ENST00000347458 CCDC88BA6NC98 1476 aa15.78■□□□□ 0.12
STAU1-202ENST00000347458 ABCC8Q09428 1581 aa15.77■□□□□ 0.12
STAU1-202ENST00000347458 UBTFP17480 764 aaKnown RBP15.77■□□□□ 0.11
STAU1-202ENST00000347458 EIF4G1Q04637 1599 aaKnown RBP15.76■□□□□ 0.11
STAU1-202ENST00000347458 SOGA1O94964 1423 aa15.75■□□□□ 0.11
STAU1-202ENST00000347458 ERICH6Q7L0X2 663 aa15.74■□□□□ 0.11
STAU1-202ENST00000347458 NACADO15069 1562 aa15.71■□□□□ 0.11
STAU1-202ENST00000347458 WIZO95785 1651 aa15.7■□□□□ 0.1
STAU1-202ENST00000347458 DHX57Q6P158 1386 aaKnown RBP15.7■□□□□ 0.1
STAU1-202ENST00000347458 NEFLP07196 543 aa15.68■□□□□ 0.1
STAU1-202ENST00000347458 ANO8Q9HCE9 1232 aaPredicted RBP15.68■□□□□ 0.1
STAU1-202ENST00000347458 FANCIQ9NVI1 1328 aa15.67■□□□□ 0.1
STAU1-202ENST00000347458 RUSC2Q8N2Y8 1516 aa15.66■□□□□ 0.1
STAU1-202ENST00000347458 DEKP35659 375 aaKnown RBP15.65■□□□□ 0.1
STAU1-202ENST00000347458 GOLGA3Q08378 1498 aa15.6■□□□□ 0.09
STAU1-202ENST00000347458 APLP2Q06481 763 aa15.59■□□□□ 0.09
STAU1-202ENST00000347458 TRIM52Q96A61 297 aa15.57■□□□□ 0.08
STAU1-202ENST00000347458 MYT1LQ9UL68 1186 aa15.57■□□□□ 0.08
STAU1-202ENST00000347458 EEA1Q15075 1411 aa15.55■□□□□ 0.08
STAU1-202ENST00000347458 CLIP1P30622 1438 aa15.55■□□□□ 0.08
STAU1-202ENST00000347458 BAZ1AQ9NRL2 1556 aaPredicted RBP15.54■□□□□ 0.08
STAU1-202ENST00000347458 DDX10Q13206 875 aaKnown RBP15.52■□□□□ 0.08
STAU1-202ENST00000347458 VPS8Q8N3P4 1428 aa15.52■□□□□ 0.08
STAU1-202ENST00000347458 CDK11AQ9UQ88 783 aaPredicted RBP15.52■□□□□ 0.07
STAU1-202ENST00000347458 SALL2Q9Y467 1007 aaPredicted RBP15.51■□□□□ 0.07
STAU1-202ENST00000347458 RANGAP1P46060 587 aaPredicted RBP15.48■□□□□ 0.07
STAU1-202ENST00000347458 IRX6P78412 446 aaPredicted RBP15.45■□□□□ 0.06
STAU1-202ENST00000347458 NBR1Q14596 966 aa15.43■□□□□ 0.06
STAU1-202ENST00000347458 PPP1R15AO75807 674 aaPredicted RBP15.42■□□□□ 0.06
STAU1-202ENST00000347458 CCDC136Q96JN2 1154 aa15.42■□□□□ 0.06
STAU1-202ENST00000347458 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
STAU1-202ENST00000347458 CCER2I3L3R5 266 aa15.39■□□□□ 0.05
STAU1-202ENST00000347458 ERICH6BQ5W0A0 696 aa15.38■□□□□ 0.05
STAU1-202ENST00000347458 KIF21BO75037 1637 aa15.36■□□□□ 0.05
STAU1-202ENST00000347458 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
STAU1-202ENST00000347458 NOP58Q9Y2X3 529 aaKnown RBP15.34■□□□□ 0.05
STAU1-202ENST00000347458 ANP32CO43423 234 aa15.34■□□□□ 0.05
STAU1-202ENST00000347458 HIRIP3Q9BW71 556 aaPredicted RBP15.34■□□□□ 0.05
STAU1-202ENST00000347458 KANK4Q5T7N3 995 aaPredicted RBP15.33■□□□□ 0.05
STAU1-202ENST00000347458 SMARCA2P51531 1590 aa15.33■□□□□ 0.04
STAU1-202ENST00000347458 TOP2AP11388 1531 aaKnown RBP15.33■□□□□ 0.04
STAU1-202ENST00000347458 IL27Q8NEV9 243 aa15.33■□□□□ 0.04
STAU1-202ENST00000347458 WDR97A6NE52 1622 aa15.33■□□□□ 0.04
STAU1-202ENST00000347458 UNC13AQ9UPW8 1703 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms