RNA–Protein interactions for RNA: ENST00000378540.8

PPM1B-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 2

Gene PPM1B, Length 1,703 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-203ENST00000378540 NISCHQ9Y2I1 1504 aa53.27■■■■■ 6.12
PPM1B-203ENST00000378540 CCDC180Q9P1Z9 1646 aa46.59■■■■■ 5.05
PPM1B-203ENST00000378540 ZCCHC6Q5VYS8 1495 aaKnown RBP44.65■■■■■ 4.74
PPM1B-203ENST00000378540 ABCC9O60706 1549 aa44.51■■■■■ 4.72
PPM1B-203ENST00000378540 DCAF8L2P0C7V8 631 aa44.33■■■■■ 4.69
PPM1B-203ENST00000378540 DCAF1Q9Y4B6 1507 aa43.99■■■■■ 4.63
PPM1B-203ENST00000378540 MYO15BQ96JP2 1530 aa43.58■■■■■ 4.57
PPM1B-203ENST00000378540 NACADO15069 1562 aa43.51■■■■■ 4.56
PPM1B-203ENST00000378540 SHROOM4Q9ULL8 1493 aa43.34■■■■■ 4.53
PPM1B-203ENST00000378540 RB1CC1Q8TDY2 1594 aa43.25■■■■■ 4.51
PPM1B-203ENST00000378540 SCRIBQ14160 1630 aa42.89■■■■■ 4.46
PPM1B-203ENST00000378540 UNC13AQ9UPW8 1703 aa42.34■■■■■ 4.37
PPM1B-203ENST00000378540 PABPN1Q86U42 306 aaKnown RBP eCLIP41.95■■■■■ 4.31
PPM1B-203ENST00000378540 BICRAQ9NZM4 1560 aa41.93■■■■■ 4.3
PPM1B-203ENST00000378540 SUPT5HO00267 1087 aaKnown RBP41.53■■■■■ 4.24
PPM1B-203ENST00000378540 CECR2Q9BXF3 1484 aa41.47■■■■■ 4.23
PPM1B-203ENST00000378540 RSF1Q96T23 1441 aaPredicted RBP41.2■■■■■ 4.19
PPM1B-203ENST00000378540 MROH2BQ7Z745 1585 aa41.17■■■■■ 4.18
PPM1B-203ENST00000378540 BAZ1AQ9NRL2 1556 aaPredicted RBP41.16■■■■■ 4.18
PPM1B-203ENST00000378540 SMARCA4P51532 1647 aa41.03■■■■■ 4.16
PPM1B-203ENST00000378540 WIZO95785 1651 aa40.82■■■■■ 4.13
PPM1B-203ENST00000378540 EIF4G1Q04637 1599 aaKnown RBP40.71■■■■■ 4.11
PPM1B-203ENST00000378540 PEG3Q9GZU2 1588 aa40.48■■■■■ 4.07
PPM1B-203ENST00000378540 ATAD2BQ9ULI0 1458 aa40.46■■■■■ 4.07
PPM1B-203ENST00000378540 SMARCA2P51531 1590 aa40.42■■■■■ 4.06
PPM1B-203ENST00000378540 TOP2AP11388 1531 aaKnown RBP40.35■■■■■ 4.05
PPM1B-203ENST00000378540 BAZ1BQ9UIG0 1483 aaKnown RBP40.24■■■■■ 4.03
PPM1B-203ENST00000378540 CC2D2AQ9P2K1 1620 aa40.22■■■■■ 4.03
PPM1B-203ENST00000378540 NCAPD3P42695 1498 aa40.16■■■■■ 4.02
PPM1B-203ENST00000378540 HMGXB3Q12766 1538 aa40.05■■■■■ 4
PPM1B-203ENST00000378540 CCDC88BA6NC98 1476 aa39.98■■■■□ 3.99
PPM1B-203ENST00000378540 DNAJC5BQ9UF47 199 aa39.61■■■■□ 3.93
PPM1B-203ENST00000378540 CHIC1Q5VXU3 224 aa39.49■■■■□ 3.91
PPM1B-203ENST00000378540 CFTRP13569 1480 aa39.17■■■■□ 3.86
PPM1B-203ENST00000378540 CADPSQ9ULU8 1353 aa39.15■■■■□ 3.86
PPM1B-203ENST00000378540 TRIM41Q8WV44 630 aa39.05■■■■□ 3.84
PPM1B-203ENST00000378540 ABCC8Q09428 1581 aa39.03■■■■□ 3.84
PPM1B-203ENST00000378540 NESP48681 1621 aa38.94■■■■□ 3.82
PPM1B-203ENST00000378540 PRDM2Q13029 1718 aa38.91■■■■□ 3.82
PPM1B-203ENST00000378540 LAMC3Q9Y6N6 1575 aa38.85■■■■□ 3.81
PPM1B-203ENST00000378540 WRNQ14191 1432 aaPredicted RBP eCLIP38.81■■■■□ 3.8
PPM1B-203ENST00000378540 FANCD2Q9BXW9 1451 aa38.71■■■■□ 3.79
PPM1B-203ENST00000378540 SYNJ1O43426 1573 aa38.65■■■■□ 3.78
PPM1B-203ENST00000378540 PDS5BQ9NTI5 1447 aa38.61■■■■□ 3.77
PPM1B-203ENST00000378540 CUX1P39880 1505 aa38.51■■■■□ 3.76
PPM1B-203ENST00000378540 TOP2BQ02880 1626 aa38.5■■■■□ 3.75
PPM1B-203ENST00000378540 CEP164Q9UPV0 1460 aa38.5■■■■□ 3.75
PPM1B-203ENST00000378540 BIVM-ERCC5R4GMW8 1640 aa38.46■■■■□ 3.75
PPM1B-203ENST00000378540 KIF21AQ7Z4S6 1674 aa38.44■■■■□ 3.74
PPM1B-203ENST00000378540 FAM9AQ8IZU1 332 aaPredicted RBP38.38■■■■□ 3.74
PPM1B-203ENST00000378540 DNMBPQ6XZF7 1577 aa38.27■■■■□ 3.72
PPM1B-203ENST00000378540 TOPBP1Q92547 1522 aa38.25■■■■□ 3.71
PPM1B-203ENST00000378540 URB2Q14146 1524 aaKnown RBP38.24■■■■□ 3.71
PPM1B-203ENST00000378540 SOGA1O94964 1423 aa38.23■■■■□ 3.71
PPM1B-203ENST00000378540 ERCC6Q03468 1493 aa38.21■■■■□ 3.71
PPM1B-203ENST00000378540 FGD5Q6ZNL6 1462 aa38.16■■■■□ 3.7
PPM1B-203ENST00000378540 MRC2Q9UBG0 1479 aa38.12■■■■□ 3.69
PPM1B-203ENST00000378540 RUSC2Q8N2Y8 1516 aa38.11■■■■□ 3.69
PPM1B-203ENST00000378540 LOC105371045A0A1W2PR82 267 aa38.03■■■■□ 3.68
PPM1B-203ENST00000378540 POLA1P09884 1462 aaPredicted RBP38.02■■■■□ 3.68
PPM1B-203ENST00000378540 EEA1Q15075 1411 aa38.02■■■■□ 3.68
PPM1B-203ENST00000378540 RAD54L2Q9Y4B4 1467 aa37.94■■■■□ 3.66
PPM1B-203ENST00000378540 CSRNP3Q8WYN3 585 aa37.93■■■■□ 3.66
PPM1B-203ENST00000378540 EHMT2Q96KQ7 1210 aa37.91■■■■□ 3.66
PPM1B-203ENST00000378540 WDR62O43379 1518 aa37.9■■■■□ 3.66
PPM1B-203ENST00000378540 CUX2O14529 1486 aa37.87■■■■□ 3.65
PPM1B-203ENST00000378540 THOC2Q8NI27 1593 aaKnown RBP37.87■■■■□ 3.65
PPM1B-203ENST00000378540 KIF27Q86VH2 1401 aa37.87■■■■□ 3.65
PPM1B-203ENST00000378540 ABCA10Q8WWZ4 1543 aa37.79■■■■□ 3.64
PPM1B-203ENST00000378540 TARBP1Q13395 1621 aaKnown RBP37.67■■■■□ 3.62
PPM1B-203ENST00000378540 WDR97A6NE52 1622 aa37.67■■■■□ 3.62
PPM1B-203ENST00000378540 TDRD9Q8NDG6 1382 aaKnown RBP37.63■■■■□ 3.61
PPM1B-203ENST00000378540 IFT140Q96RY7 1462 aa37.6■■■■□ 3.61
PPM1B-203ENST00000378540 IGF1RP08069 1367 aa37.57■■■■□ 3.61
PPM1B-203ENST00000378540 KIF21BO75037 1637 aa37.54■■■■□ 3.6
PPM1B-203ENST00000378540 GOLGA3Q08378 1498 aa37.51■■■■□ 3.6
PPM1B-203ENST00000378540 GAPVD1Q14C86 1478 aa37.5■■■■□ 3.59
PPM1B-203ENST00000378540 ABCA5Q8WWZ7 1642 aa37.49■■■■□ 3.59
PPM1B-203ENST00000378540 PRXQ9BXM0 1461 aa37.48■■■■□ 3.59
PPM1B-203ENST00000378540 UBTFP17480 764 aaKnown RBP37.47■■■■□ 3.59
PPM1B-203ENST00000378540 RAPGEF2Q9Y4G8 1499 aa37.45■■■■□ 3.59
PPM1B-203ENST00000378540 AQRO60306 1485 aaKnown RBP eCLIP37.44■■■■□ 3.58
PPM1B-203ENST00000378540 ZNF608Q9ULD9 1512 aaPredicted RBP37.43■■■■□ 3.58
PPM1B-203ENST00000378540 CARMIL1Q5VZK9 1371 aa37.39■■■■□ 3.58
PPM1B-203ENST00000378540 ERICH3Q5RHP9 1530 aa37.35■■■■□ 3.57
PPM1B-203ENST00000378540 TNIKQ9UKE5 1360 aa37.33■■■■□ 3.57
PPM1B-203ENST00000378540 PBRM1Q86U86 1689 aa37.28■■■■□ 3.56
PPM1B-203ENST00000378540 CUL7Q14999 1698 aa37.27■■■■□ 3.56
PPM1B-203ENST00000378540 EIF4G3O43432 1585 aaKnown RBP37.26■■■■□ 3.56
PPM1B-203ENST00000378540 GRIN2BQ13224 1484 aa37.25■■■■□ 3.55
PPM1B-203ENST00000378540 CEP162Q5TB80 1403 aa37.11■■■■□ 3.53
PPM1B-203ENST00000378540 FHAD1B1AJZ9 1412 aa37.07■■■■□ 3.53
PPM1B-203ENST00000378540 SNAPC4Q5SXM2 1469 aa37.06■■■■□ 3.52
PPM1B-203ENST00000378540 RANGAP1P46060 587 aaPredicted RBP37.05■■■■□ 3.52
PPM1B-203ENST00000378540 ADAMTS12P58397 1594 aa37.05■■■■□ 3.52
PPM1B-203ENST00000378540 MAGI1Q96QZ7 1491 aaPredicted RBP36.95■■■■□ 3.51
PPM1B-203ENST00000378540 CLIP1P30622 1438 aa36.92■■■■□ 3.5
PPM1B-203ENST00000378540 CHMP7Q8WUX9 453 aaPredicted RBP36.85■■■■□ 3.49
PPM1B-203ENST00000378540 FBLN2P98095 1184 aa36.85■■■■□ 3.49
PPM1B-203ENST00000378540 SYNJ2O15056 1496 aa36.83■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms