RNA–Protein interactions for RNA: ENST00000340954.11

STAU1-201, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene STAU1, Length 3,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-201ENST00000340954 NISCHQ9Y2I1 1504 aa22.16■■□□□ 1.14
STAU1-201ENST00000340954 DCAF8L2P0C7V8 631 aa19.25■□□□□ 0.67
STAU1-201ENST00000340954 SHROOM4Q9ULL8 1493 aa19.24■□□□□ 0.67
STAU1-201ENST00000340954 SUPT5HO00267 1087 aaKnown RBP18.76■□□□□ 0.59
STAU1-201ENST00000340954 CCDC180Q9P1Z9 1646 aa18.73■□□□□ 0.59
STAU1-201ENST00000340954 SLC24A1O60721 1099 aa18.7■□□□□ 0.58
STAU1-201ENST00000340954 ZCCHC6Q5VYS8 1495 aaKnown RBP18.61■□□□□ 0.57
STAU1-201ENST00000340954 ABCC9O60706 1549 aa18.2■□□□□ 0.5
STAU1-201ENST00000340954 DCAF1Q9Y4B6 1507 aa17.92■□□□□ 0.46
STAU1-201ENST00000340954 SCRIBQ14160 1630 aa17.92■□□□□ 0.46
STAU1-201ENST00000340954 CHIC1Q5VXU3 224 aa17.78■□□□□ 0.44
STAU1-201ENST00000340954 MYO15BQ96JP2 1530 aa17.55■□□□□ 0.4
STAU1-201ENST00000340954 NACADO15069 1562 aa17.53■□□□□ 0.4
STAU1-201ENST00000340954 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.4
STAU1-201ENST00000340954 EHMT2Q96KQ7 1210 aa17.52■□□□□ 0.39
STAU1-201ENST00000340954 RSF1Q96T23 1441 aaPredicted RBP17.51■□□□□ 0.39
STAU1-201ENST00000340954 CECR2Q9BXF3 1484 aa17.49■□□□□ 0.39
STAU1-201ENST00000340954 LOC105371045A0A1W2PR82 267 aa17.47■□□□□ 0.39
STAU1-201ENST00000340954 FAM9AQ8IZU1 332 aaPredicted RBP17.44■□□□□ 0.38
STAU1-201ENST00000340954 RB1CC1Q8TDY2 1594 aa17.39■□□□□ 0.37
STAU1-201ENST00000340954 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
STAU1-201ENST00000340954 MROH2BQ7Z745 1585 aa17.31■□□□□ 0.36
STAU1-201ENST00000340954 MYT1Q01538 1121 aa17.24■□□□□ 0.35
STAU1-201ENST00000340954 WIZO95785 1651 aa17.19■□□□□ 0.34
STAU1-201ENST00000340954 PCGF6Q9BYE7 350 aa17.15■□□□□ 0.34
STAU1-201ENST00000340954 PRKCSHP14314 528 aaPredicted RBP17.11■□□□□ 0.33
STAU1-201ENST00000340954 DAXXQ9UER7 740 aaPredicted RBP17.09■□□□□ 0.33
STAU1-201ENST00000340954 PELP1Q8IZL8 1130 aaKnown RBP17.06■□□□□ 0.32
STAU1-201ENST00000340954 BAZ1AQ9NRL2 1556 aaPredicted RBP17.02■□□□□ 0.32
STAU1-201ENST00000340954 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.32
STAU1-201ENST00000340954 TTBK1Q5TCY1 1321 aaPredicted RBP16.93■□□□□ 0.3
STAU1-201ENST00000340954 PPARGC1BQ86YN6 1023 aaKnown RBP16.92■□□□□ 0.3
STAU1-201ENST00000340954 SMARCA4P51532 1647 aa16.91■□□□□ 0.3
STAU1-201ENST00000340954 BICRAQ9NZM4 1560 aa16.89■□□□□ 0.29
STAU1-201ENST00000340954 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
STAU1-201ENST00000340954 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
STAU1-201ENST00000340954 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
STAU1-201ENST00000340954 ERICH6Q7L0X2 663 aa16.8■□□□□ 0.28
STAU1-201ENST00000340954 TOP2AP11388 1531 aaKnown RBP16.78■□□□□ 0.28
STAU1-201ENST00000340954 SMARCA2P51531 1590 aa16.72■□□□□ 0.27
STAU1-201ENST00000340954 APLP2Q06481 763 aa16.71■□□□□ 0.27
STAU1-201ENST00000340954 RANGAP1P46060 587 aaPredicted RBP16.7■□□□□ 0.26
STAU1-201ENST00000340954 UBTFP17480 764 aaKnown RBP16.67■□□□□ 0.26
STAU1-201ENST00000340954 TRIM26Q12899 539 aaPredicted RBP16.66■□□□□ 0.26
STAU1-201ENST00000340954 HRCP23327 699 aa16.66■□□□□ 0.26
STAU1-201ENST00000340954 RTN4Q9NQC3 1192 aaKnown RBP16.66■□□□□ 0.26
STAU1-201ENST00000340954 BAZ1BQ9UIG0 1483 aaKnown RBP16.65■□□□□ 0.26
STAU1-201ENST00000340954 ATAD2BQ9ULI0 1458 aa16.64■□□□□ 0.25
STAU1-201ENST00000340954 SOGA1O94964 1423 aa16.62■□□□□ 0.25
STAU1-201ENST00000340954 RUSC2Q8N2Y8 1516 aa16.56■□□□□ 0.24
STAU1-201ENST00000340954 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
STAU1-201ENST00000340954 EIF4G1Q04637 1599 aaKnown RBP16.52■□□□□ 0.24
STAU1-201ENST00000340954 WRNQ14191 1432 aaPredicted RBP eCLIP16.52■□□□□ 0.23
STAU1-201ENST00000340954 NCBP3Q53F19 620 aaKnown RBP16.42■□□□□ 0.22
STAU1-201ENST00000340954 PEG3Q9GZU2 1588 aa16.41■□□□□ 0.22
STAU1-201ENST00000340954 SYNJ1O43426 1573 aa16.35■□□□□ 0.21
STAU1-201ENST00000340954 CEP162Q5TB80 1403 aa16.33■□□□□ 0.21
STAU1-201ENST00000340954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
STAU1-201ENST00000340954 NCAPD3P42695 1498 aa16.29■□□□□ 0.2
STAU1-201ENST00000340954 TNIKQ9UKE5 1360 aa16.24■□□□□ 0.19
STAU1-201ENST00000340954 GOLGA3Q08378 1498 aa16.22■□□□□ 0.19
STAU1-201ENST00000340954 EEA1Q15075 1411 aa16.21■□□□□ 0.19
STAU1-201ENST00000340954 DNAJC5BQ9UF47 199 aa16.21■□□□□ 0.19
STAU1-201ENST00000340954 CCER1Q8TC90 406 aaPredicted RBP16.21■□□□□ 0.19
STAU1-201ENST00000340954 RAPGEF2Q9Y4G8 1499 aa16.18■□□□□ 0.18
STAU1-201ENST00000340954 HMGXB3Q12766 1538 aa16.16■□□□□ 0.18
STAU1-201ENST00000340954 CC2D2AQ9P2K1 1620 aa16.16■□□□□ 0.18
STAU1-201ENST00000340954 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
STAU1-201ENST00000340954 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
STAU1-201ENST00000340954 CLIP1P30622 1438 aa16.13■□□□□ 0.17
STAU1-201ENST00000340954 CFTRP13569 1480 aa16.11■□□□□ 0.17
STAU1-201ENST00000340954 CADPSQ9ULU8 1353 aa16.1■□□□□ 0.17
STAU1-201ENST00000340954 CUX1P39880 1505 aa16.1■□□□□ 0.17
STAU1-201ENST00000340954 EIF5BO60841 1220 aaKnown RBP16.09■□□□□ 0.17
STAU1-201ENST00000340954 ATP1B4Q9UN42 357 aaPredicted RBP16.07■□□□□ 0.16
STAU1-201ENST00000340954 TOP2BQ02880 1626 aa16.07■□□□□ 0.16
STAU1-201ENST00000340954 P3H3Q8IVL6 736 aa16.06■□□□□ 0.16
STAU1-201ENST00000340954 NESP48681 1621 aa16.06■□□□□ 0.16
STAU1-201ENST00000340954 ZEB1P37275 1124 aaPredicted RBP16.05■□□□□ 0.16
STAU1-201ENST00000340954 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
STAU1-201ENST00000340954 TIMELESSQ9UNS1 1208 aa16.02■□□□□ 0.15
STAU1-201ENST00000340954 CUX2O14529 1486 aa16.02■□□□□ 0.15
STAU1-201ENST00000340954 ITGAEP38570 1179 aa15.97■□□□□ 0.15
STAU1-201ENST00000340954 FANCD2Q9BXW9 1451 aa15.96■□□□□ 0.15
STAU1-201ENST00000340954 KIF21BO75037 1637 aa15.95■□□□□ 0.14
STAU1-201ENST00000340954 FGD5Q6ZNL6 1462 aa15.93■□□□□ 0.14
STAU1-201ENST00000340954 BIVM-ERCC5R4GMW8 1640 aa15.93■□□□□ 0.14
STAU1-201ENST00000340954 RAD54L2Q9Y4B4 1467 aa15.92■□□□□ 0.14
STAU1-201ENST00000340954 KANK4Q5T7N3 995 aaPredicted RBP15.92■□□□□ 0.14
STAU1-201ENST00000340954 VPS8Q8N3P4 1428 aa15.91■□□□□ 0.14
STAU1-201ENST00000340954 IGF1RP08069 1367 aa15.9■□□□□ 0.14
STAU1-201ENST00000340954 PRXQ9BXM0 1461 aa15.89■□□□□ 0.13
STAU1-201ENST00000340954 CARMIL1Q5VZK9 1371 aa15.88■□□□□ 0.13
STAU1-201ENST00000340954 TDRD9Q8NDG6 1382 aaKnown RBP15.85■□□□□ 0.13
STAU1-201ENST00000340954 ARXQ96QS3 562 aa15.83■□□□□ 0.13
STAU1-201ENST00000340954 TULP1O00294 542 aaPredicted RBP15.82■□□□□ 0.12
STAU1-201ENST00000340954 AMER1Q5JTC6 1135 aaPredicted RBP15.82■□□□□ 0.12
STAU1-201ENST00000340954 ARAP1Q96P48 1450 aa15.81■□□□□ 0.12
STAU1-201ENST00000340954 KLHL34Q8N239 644 aa15.81■□□□□ 0.12
STAU1-201ENST00000340954 PLEKHG5O94827 1062 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms