RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 NISCHQ9Y2I1 1504 aa7.3□□□□□ -1.24
CCNL1-204ENST00000464316 CCDC180Q9P1Z9 1646 aa7.09□□□□□ -1.28
CCNL1-204ENST00000464316 MYO15BQ96JP2 1530 aa6.71□□□□□ -1.34
CCNL1-204ENST00000464316 DCAF1Q9Y4B6 1507 aa6.62□□□□□ -1.35
CCNL1-204ENST00000464316 PELP1Q8IZL8 1130 aaKnown RBP6.52□□□□□ -1.37
CCNL1-204ENST00000464316 UNC13AQ9UPW8 1703 aa6.52□□□□□ -1.37
CCNL1-204ENST00000464316 HRCP23327 699 aa6.42□□□□□ -1.38
CCNL1-204ENST00000464316 SHROOM4Q9ULL8 1493 aa6.39□□□□□ -1.39
CCNL1-204ENST00000464316 MYT1Q01538 1121 aa6.38□□□□□ -1.39
CCNL1-204ENST00000464316 ZCCHC6Q5VYS8 1495 aaKnown RBP6.28□□□□□ -1.4
CCNL1-204ENST00000464316 PCGF6Q9BYE7 350 aa6.26□□□□□ -1.41
CCNL1-204ENST00000464316 SUPT5HO00267 1087 aaKnown RBP6.24□□□□□ -1.41
CCNL1-204ENST00000464316 NACADO15069 1562 aa6.22□□□□□ -1.41
CCNL1-204ENST00000464316 ZEB1P37275 1124 aaPredicted RBP6.22□□□□□ -1.41
CCNL1-204ENST00000464316 BICRAQ9NZM4 1560 aa6.21□□□□□ -1.42
CCNL1-204ENST00000464316 PEG3Q9GZU2 1588 aa6.18□□□□□ -1.42
CCNL1-204ENST00000464316 PPARGC1BQ86YN6 1023 aaKnown RBP6.15□□□□□ -1.43
CCNL1-204ENST00000464316 TRIM26Q12899 539 aaPredicted RBP6.12□□□□□ -1.43
CCNL1-204ENST00000464316 CHIC1Q5VXU3 224 aa6.11□□□□□ -1.43
CCNL1-204ENST00000464316 PRDM2Q13029 1718 aa6.11□□□□□ -1.43
CCNL1-204ENST00000464316 CENPBP07199 599 aaPredicted RBP6.06□□□□□ -1.44
CCNL1-204ENST00000464316 SCAF1Q9H7N4 1312 aaKnown RBP6.02□□□□□ -1.45
CCNL1-204ENST00000464316 RB1CC1Q8TDY2 1594 aa6.02□□□□□ -1.45
CCNL1-204ENST00000464316 EIF4G1Q04637 1599 aaKnown RBP6□□□□□ -1.45
CCNL1-204ENST00000464316 TTBK1Q5TCY1 1321 aaPredicted RBP5.98□□□□□ -1.45
CCNL1-204ENST00000464316 ACIN1Q9UKV3 1341 aaKnown RBP5.97□□□□□ -1.45
CCNL1-204ENST00000464316 LOC105371045A0A1W2PR82 267 aa5.93□□□□□ -1.46
CCNL1-204ENST00000464316 GTF3C3Q9Y5Q9 886 aa5.91□□□□□ -1.46
CCNL1-204ENST00000464316 SMARCA2P51531 1590 aa5.91□□□□□ -1.46
CCNL1-204ENST00000464316 ABCC9O60706 1549 aa5.91□□□□□ -1.46
CCNL1-204ENST00000464316 DCAF8L2P0C7V8 631 aa5.88□□□□□ -1.47
CCNL1-204ENST00000464316 CCER1Q8TC90 406 aaPredicted RBP5.88□□□□□ -1.47
CCNL1-204ENST00000464316 NEUROD1Q13562 356 aa5.87□□□□□ -1.47
CCNL1-204ENST00000464316 DIEXFQ68CQ4 756 aaKnown RBP5.87□□□□□ -1.47
CCNL1-204ENST00000464316 HMGXB3Q12766 1538 aa5.84□□□□□ -1.48
CCNL1-204ENST00000464316 TRIM41Q8WV44 630 aa5.83□□□□□ -1.48
CCNL1-204ENST00000464316 POTEDQ86YR6 584 aa5.81□□□□□ -1.48
CCNL1-204ENST00000464316 WDR97A6NE52 1622 aa5.8□□□□□ -1.48
CCNL1-204ENST00000464316 CLSPNQ9HAW4 1339 aa5.8□□□□□ -1.48
CCNL1-204ENST00000464316 SCRIBQ14160 1630 aa5.79□□□□□ -1.48
CCNL1-204ENST00000464316 SMARCA4P51532 1647 aa5.76□□□□□ -1.49
CCNL1-204ENST00000464316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.76□□□□□ -1.49
CCNL1-204ENST00000464316 AEBP2Q6ZN18 517 aaPredicted RBP5.76□□□□□ -1.49
CCNL1-204ENST00000464316 FAM9AQ8IZU1 332 aaPredicted RBP5.76□□□□□ -1.49
CCNL1-204ENST00000464316 ZNF316A6NFI3 1004 aaPredicted RBP5.75□□□□□ -1.49
CCNL1-204ENST00000464316 YTHDC1Q96MU7 727 aaKnown RBP5.74□□□□□ -1.49
CCNL1-204ENST00000464316 BAZ1AQ9NRL2 1556 aaPredicted RBP5.74□□□□□ -1.49
CCNL1-204ENST00000464316 ANP32EQ9BTT0 268 aa5.69□□□□□ -1.5
CCNL1-204ENST00000464316 EHMT2Q96KQ7 1210 aa5.69□□□□□ -1.5
CCNL1-204ENST00000464316 BCL11AQ9H165 835 aa5.67□□□□□ -1.5
CCNL1-204ENST00000464316 THOC2Q8NI27 1593 aaKnown RBP5.66□□□□□ -1.5
CCNL1-204ENST00000464316 MIER1Q8N108 512 aa5.63□□□□□ -1.51
CCNL1-204ENST00000464316 BIVM-ERCC5R4GMW8 1640 aa5.62□□□□□ -1.51
CCNL1-204ENST00000464316 NEFLP07196 543 aa5.62□□□□□ -1.51
CCNL1-204ENST00000464316 ERICH6Q7L0X2 663 aa5.61□□□□□ -1.51
CCNL1-204ENST00000464316 NCAPD3P42695 1498 aa5.61□□□□□ -1.51
CCNL1-204ENST00000464316 APLP2Q06481 763 aa5.6□□□□□ -1.51
CCNL1-204ENST00000464316 MYT1LQ9UL68 1186 aa5.6□□□□□ -1.51
CCNL1-204ENST00000464316 CC2D2AQ9P2K1 1620 aa5.59□□□□□ -1.51
CCNL1-204ENST00000464316 SUPT16HQ9Y5B9 1047 aaKnown RBP5.59□□□□□ -1.51
CCNL1-204ENST00000464316 TOP2AP11388 1531 aaKnown RBP5.58□□□□□ -1.52
CCNL1-204ENST00000464316 TSHZ2Q9NRE2 1034 aa5.57□□□□□ -1.52
CCNL1-204ENST00000464316 RSF1Q96T23 1441 aaPredicted RBP5.55□□□□□ -1.52
CCNL1-204ENST00000464316 UBTFP17480 764 aaKnown RBP5.55□□□□□ -1.52
CCNL1-204ENST00000464316 CSRNP3Q8WYN3 585 aa5.54□□□□□ -1.52
CCNL1-204ENST00000464316 LAMC3Q9Y6N6 1575 aa5.54□□□□□ -1.52
CCNL1-204ENST00000464316 HNRNPUL2Q1KMD3 747 aaKnown RBP5.54□□□□□ -1.52
CCNL1-204ENST00000464316 WRNQ14191 1432 aaPredicted RBP eCLIP5.54□□□□□ -1.52
CCNL1-204ENST00000464316 WDR62O43379 1518 aa5.51□□□□□ -1.53
CCNL1-204ENST00000464316 KIF21AQ7Z4S6 1674 aa5.5□□□□□ -1.53
CCNL1-204ENST00000464316 FKBP8Q14318 412 aa5.49□□□□□ -1.53
CCNL1-204ENST00000464316 TNIKQ9UKE5 1360 aa5.49□□□□□ -1.53
CCNL1-204ENST00000464316 TARBP1Q13395 1621 aaKnown RBP5.49□□□□□ -1.53
CCNL1-204ENST00000464316 CDK11AQ9UQ88 783 aaPredicted RBP5.49□□□□□ -1.53
CCNL1-204ENST00000464316 WIZO95785 1651 aa5.49□□□□□ -1.53
CCNL1-204ENST00000464316 CEP162Q5TB80 1403 aa5.48□□□□□ -1.53
CCNL1-204ENST00000464316 BCANQ96GW7 911 aa5.48□□□□□ -1.53
CCNL1-204ENST00000464316 RBM19Q9Y4C8 960 aaKnown RBP5.48□□□□□ -1.53
CCNL1-204ENST00000464316 EEA1Q15075 1411 aa5.48□□□□□ -1.53
CCNL1-204ENST00000464316 MROH2BQ7Z745 1585 aa5.47□□□□□ -1.53
CCNL1-204ENST00000464316 SHROOM2Q13796 1616 aa5.46□□□□□ -1.54
CCNL1-204ENST00000464316 ABCA5Q8WWZ7 1642 aa5.46□□□□□ -1.54
CCNL1-204ENST00000464316 ATAD2BQ9ULI0 1458 aa5.46□□□□□ -1.54
CCNL1-204ENST00000464316 FANCIQ9NVI1 1328 aa5.43□□□□□ -1.54
CCNL1-204ENST00000464316 RTL5Q5HYW3 569 aaPredicted RBP5.42□□□□□ -1.54
CCNL1-204ENST00000464316 ANP32CO43423 234 aa5.42□□□□□ -1.54
CCNL1-204ENST00000464316 PRKCSHP14314 528 aaPredicted RBP5.42□□□□□ -1.54
CCNL1-204ENST00000464316 ERICH6BQ5W0A0 696 aa5.41□□□□□ -1.54
CCNL1-204ENST00000464316 GOLGA3Q08378 1498 aa5.4□□□□□ -1.54
CCNL1-204ENST00000464316 CCER2I3L3R5 266 aa5.39□□□□□ -1.55
CCNL1-204ENST00000464316 PBRM1Q86U86 1689 aa5.39□□□□□ -1.55
CCNL1-204ENST00000464316 DEKP35659 375 aaKnown RBP5.38□□□□□ -1.55
CCNL1-204ENST00000464316 CFTRP13569 1480 aa5.38□□□□□ -1.55
CCNL1-204ENST00000464316 BAZ1BQ9UIG0 1483 aaKnown RBP5.37□□□□□ -1.55
CCNL1-204ENST00000464316 CLIP1P30622 1438 aa5.37□□□□□ -1.55
CCNL1-204ENST00000464316 TOP2BQ02880 1626 aa5.37□□□□□ -1.55
CCNL1-204ENST00000464316 DDX10Q13206 875 aaKnown RBP5.37□□□□□ -1.55
CCNL1-204ENST00000464316 ITGAEP38570 1179 aa5.36□□□□□ -1.55
CCNL1-204ENST00000464316 TIMELESSQ9UNS1 1208 aa5.36□□□□□ -1.55
CCNL1-204ENST00000464316 ANP32AP39687 249 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms