RNA–Protein interactions for RNA: ENST00000536142.5

TSN-212, Transcript of translin, humanhuman

TSL 2 BASIC

Gene TSN, Length 3,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSN-212ENST00000536142 NISCHQ9Y2I1 1504 aa27.8■■■□□ 2.04
TSN-212ENST00000536142 SHROOM4Q9ULL8 1493 aa24.17■■□□□ 1.46
TSN-212ENST00000536142 SUPT5HO00267 1087 aaKnown RBP23.96■■□□□ 1.43
TSN-212ENST00000536142 DCAF8L2P0C7V8 631 aa23.58■■□□□ 1.37
TSN-212ENST00000536142 CCDC180Q9P1Z9 1646 aa23.52■■□□□ 1.36
TSN-212ENST00000536142 ZCCHC6Q5VYS8 1495 aaKnown RBP23.46■■□□□ 1.35
TSN-212ENST00000536142 PCGF6Q9BYE7 350 aa23.12■■□□□ 1.29
TSN-212ENST00000536142 CHIC1Q5VXU3 224 aa23.05■■□□□ 1.28
TSN-212ENST00000536142 HRCP23327 699 aa23.04■■□□□ 1.28
TSN-212ENST00000536142 MYO15BQ96JP2 1530 aa22.94■■□□□ 1.26
TSN-212ENST00000536142 PPARGC1BQ86YN6 1023 aaKnown RBP22.88■■□□□ 1.25
TSN-212ENST00000536142 LOC105371045A0A1W2PR82 267 aa22.71■■□□□ 1.23
TSN-212ENST00000536142 DCAF1Q9Y4B6 1507 aa22.59■■□□□ 1.21
TSN-212ENST00000536142 EHMT2Q96KQ7 1210 aa22.48■■□□□ 1.19
TSN-212ENST00000536142 SCRIBQ14160 1630 aa22.37■■□□□ 1.17
TSN-212ENST00000536142 ABCC9O60706 1549 aa22.3■■□□□ 1.16
TSN-212ENST00000536142 FAM9AQ8IZU1 332 aaPredicted RBP22.27■■□□□ 1.16
TSN-212ENST00000536142 TRIM26Q12899 539 aaPredicted RBP22.24■■□□□ 1.15
TSN-212ENST00000536142 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
TSN-212ENST00000536142 RSF1Q96T23 1441 aaPredicted RBP22.02■■□□□ 1.12
TSN-212ENST00000536142 CECR2Q9BXF3 1484 aa21.86■■□□□ 1.09
TSN-212ENST00000536142 RB1CC1Q8TDY2 1594 aa21.85■■□□□ 1.09
TSN-212ENST00000536142 NACADO15069 1562 aa21.83■■□□□ 1.08
TSN-212ENST00000536142 ZEB1P37275 1124 aaPredicted RBP21.82■■□□□ 1.08
TSN-212ENST00000536142 MROH2BQ7Z745 1585 aa21.71■■□□□ 1.07
TSN-212ENST00000536142 TTBK1Q5TCY1 1321 aaPredicted RBP21.7■■□□□ 1.06
TSN-212ENST00000536142 WIZO95785 1651 aa21.62■■□□□ 1.05
TSN-212ENST00000536142 SCAF1Q9H7N4 1312 aaKnown RBP21.61■■□□□ 1.05
TSN-212ENST00000536142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.6■■□□□ 1.05
TSN-212ENST00000536142 CCER1Q8TC90 406 aaPredicted RBP21.55■■□□□ 1.04
TSN-212ENST00000536142 PABPN1Q86U42 306 aaKnown RBP eCLIP21.42■■□□□ 1.02
TSN-212ENST00000536142 PELP1Q8IZL8 1130 aaKnown RBP21.4■■□□□ 1.02
TSN-212ENST00000536142 BAZ1AQ9NRL2 1556 aaPredicted RBP21.33■■□□□ 1
TSN-212ENST00000536142 UNC13AQ9UPW8 1703 aa21.3■■□□□ 1
TSN-212ENST00000536142 NEUROD1Q13562 356 aa21.26■□□□□ 0.99
TSN-212ENST00000536142 DIEXFQ68CQ4 756 aaKnown RBP21.22■□□□□ 0.99
TSN-212ENST00000536142 SMARCA4P51532 1647 aa21.21■□□□□ 0.99
TSN-212ENST00000536142 ACIN1Q9UKV3 1341 aaKnown RBP21.21■□□□□ 0.99
TSN-212ENST00000536142 ABCC8Q09428 1581 aa21.17■□□□□ 0.98
TSN-212ENST00000536142 GTF3C3Q9Y5Q9 886 aa21.17■□□□□ 0.98
TSN-212ENST00000536142 CCDC88BA6NC98 1476 aa21.15■□□□□ 0.98
TSN-212ENST00000536142 TOP2AP11388 1531 aaKnown RBP21.13■□□□□ 0.97
TSN-212ENST00000536142 YTHDC1Q96MU7 727 aaKnown RBP21.13■□□□□ 0.97
TSN-212ENST00000536142 CENPBP07199 599 aaPredicted RBP21.11■□□□□ 0.97
TSN-212ENST00000536142 UBTFP17480 764 aaKnown RBP21.1■□□□□ 0.97
TSN-212ENST00000536142 EIF4G1Q04637 1599 aaKnown RBP21.1■□□□□ 0.97
TSN-212ENST00000536142 SMARCA2P51531 1590 aa21.06■□□□□ 0.96
TSN-212ENST00000536142 RANGAP1P46060 587 aaPredicted RBP21.05■□□□□ 0.96
TSN-212ENST00000536142 BICRAQ9NZM4 1560 aa21.03■□□□□ 0.96
TSN-212ENST00000536142 HNRNPUL2Q1KMD3 747 aaKnown RBP20.95■□□□□ 0.94
TSN-212ENST00000536142 SOGA1O94964 1423 aa20.94■□□□□ 0.94
TSN-212ENST00000536142 RUSC2Q8N2Y8 1516 aa20.87■□□□□ 0.93
TSN-212ENST00000536142 CEP162Q5TB80 1403 aa20.85■□□□□ 0.93
TSN-212ENST00000536142 ZNF316A6NFI3 1004 aaPredicted RBP20.83■□□□□ 0.93
TSN-212ENST00000536142 CSRNP3Q8WYN3 585 aa20.81■□□□□ 0.92
TSN-212ENST00000536142 MIER1Q8N108 512 aa20.72■□□□□ 0.91
TSN-212ENST00000536142 ATAD2BQ9ULI0 1458 aa20.71■□□□□ 0.91
TSN-212ENST00000536142 WRNQ14191 1432 aaPredicted RBP eCLIP20.71■□□□□ 0.91
TSN-212ENST00000536142 BAZ1BQ9UIG0 1483 aaKnown RBP20.7■□□□□ 0.9
TSN-212ENST00000536142 APLP2Q06481 763 aa20.7■□□□□ 0.9
TSN-212ENST00000536142 TNIKQ9UKE5 1360 aa20.65■□□□□ 0.9
TSN-212ENST00000536142 PEG3Q9GZU2 1588 aa20.64■□□□□ 0.89
TSN-212ENST00000536142 SYNJ1O43426 1573 aa20.63■□□□□ 0.89
TSN-212ENST00000536142 EEA1Q15075 1411 aa20.53■□□□□ 0.88
TSN-212ENST00000536142 GOLGA3Q08378 1498 aa20.53■□□□□ 0.88
TSN-212ENST00000536142 CLIP1P30622 1438 aa20.42■□□□□ 0.86
TSN-212ENST00000536142 CEP164Q9UPV0 1460 aa20.4■□□□□ 0.86
TSN-212ENST00000536142 ITGAEP38570 1179 aa20.39■□□□□ 0.86
TSN-212ENST00000536142 RAPGEF2Q9Y4G8 1499 aa20.39■□□□□ 0.85
TSN-212ENST00000536142 MYT1Q01538 1121 aa20.34■□□□□ 0.85
TSN-212ENST00000536142 KIF21BO75037 1637 aa20.3■□□□□ 0.84
TSN-212ENST00000536142 TOP2BQ02880 1626 aa20.27■□□□□ 0.84
TSN-212ENST00000536142 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
TSN-212ENST00000536142 VPS8Q8N3P4 1428 aa20.23■□□□□ 0.83
TSN-212ENST00000536142 CUX1P39880 1505 aa20.2■□□□□ 0.82
TSN-212ENST00000536142 HMGXB3Q12766 1538 aa20.19■□□□□ 0.82
TSN-212ENST00000536142 KANK4Q5T7N3 995 aaPredicted RBP20.18■□□□□ 0.82
TSN-212ENST00000536142 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
TSN-212ENST00000536142 BCANQ96GW7 911 aa20.14■□□□□ 0.81
TSN-212ENST00000536142 SUPT16HQ9Y5B9 1047 aaKnown RBP20.13■□□□□ 0.81
TSN-212ENST00000536142 CFTRP13569 1480 aa20.09■□□□□ 0.81
TSN-212ENST00000536142 DHX57Q6P158 1386 aaKnown RBP20.07■□□□□ 0.8
TSN-212ENST00000536142 KCNH8Q96L42 1107 aa20.07■□□□□ 0.8
TSN-212ENST00000536142 PRXQ9BXM0 1461 aa20.06■□□□□ 0.8
TSN-212ENST00000536142 ATP1B4Q9UN42 357 aaPredicted RBP20.05■□□□□ 0.8
TSN-212ENST00000536142 KIF27Q86VH2 1401 aa20.05■□□□□ 0.8
TSN-212ENST00000536142 ARAP1Q96P48 1450 aa20.02■□□□□ 0.8
TSN-212ENST00000536142 CUX2O14529 1486 aa19.98■□□□□ 0.79
TSN-212ENST00000536142 HIRIP3Q9BW71 556 aaPredicted RBP19.97■□□□□ 0.79
TSN-212ENST00000536142 ERICH3Q5RHP9 1530 aa19.97■□□□□ 0.79
TSN-212ENST00000536142 DDX10Q13206 875 aaKnown RBP19.96■□□□□ 0.79
TSN-212ENST00000536142 CADPSQ9ULU8 1353 aa19.94■□□□□ 0.78
TSN-212ENST00000536142 CLSPNQ9HAW4 1339 aa19.93■□□□□ 0.78
TSN-212ENST00000536142 FAM50AQ14320 339 aaKnown RBP19.93■□□□□ 0.78
TSN-212ENST00000536142 CC2D2AQ9P2K1 1620 aa19.93■□□□□ 0.78
TSN-212ENST00000536142 P3H3Q8IVL6 736 aa19.91■□□□□ 0.78
TSN-212ENST00000536142 TSHZ2Q9NRE2 1034 aa19.9■□□□□ 0.78
TSN-212ENST00000536142 FGD5Q6ZNL6 1462 aa19.89■□□□□ 0.77
TSN-212ENST00000536142 FKBP8Q14318 412 aa19.89■□□□□ 0.77
TSN-212ENST00000536142 SIN3AQ96ST3 1273 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms