RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 DCAF8L2P0C7V8 631 aa27.82■■■□□ 2.04
PDZD8-201ENST00000334464 PELP1Q8IZL8 1130 aaKnown RBP26.91■■□□□ 1.9
PDZD8-201ENST00000334464 NISCHQ9Y2I1 1504 aa26.55■■□□□ 1.84
PDZD8-201ENST00000334464 SUPT5HO00267 1087 aaKnown RBP26.37■■□□□ 1.81
PDZD8-201ENST00000334464 FAM9AQ8IZU1 332 aaPredicted RBP26.1■■□□□ 1.77
PDZD8-201ENST00000334464 APLP2Q06481 763 aa26.1■■□□□ 1.77
PDZD8-201ENST00000334464 SHROOM4Q9ULL8 1493 aa25.74■■□□□ 1.71
PDZD8-201ENST00000334464 CCER1Q8TC90 406 aaPredicted RBP25.6■■□□□ 1.69
PDZD8-201ENST00000334464 MYT1Q01538 1121 aa25.43■■□□□ 1.66
PDZD8-201ENST00000334464 EHMT2Q96KQ7 1210 aa25.37■■□□□ 1.65
PDZD8-201ENST00000334464 CENPBP07199 599 aaPredicted RBP25.33■■□□□ 1.65
PDZD8-201ENST00000334464 ERICH6Q7L0X2 663 aa25.33■■□□□ 1.65
PDZD8-201ENST00000334464 ZEB1P37275 1124 aaPredicted RBP25.3■■□□□ 1.64
PDZD8-201ENST00000334464 NEFLP07196 543 aa24.95■■□□□ 1.58
PDZD8-201ENST00000334464 PCGF6Q9BYE7 350 aa24.85■■□□□ 1.57
PDZD8-201ENST00000334464 TRIM41Q8WV44 630 aa24.73■■□□□ 1.55
PDZD8-201ENST00000334464 TTBK1Q5TCY1 1321 aaPredicted RBP24.7■■□□□ 1.54
PDZD8-201ENST00000334464 ATP1B4Q9UN42 357 aaPredicted RBP24.61■■□□□ 1.53
PDZD8-201ENST00000334464 UBTFP17480 764 aaKnown RBP24.59■■□□□ 1.53
PDZD8-201ENST00000334464 RANGAP1P46060 587 aaPredicted RBP24.48■■□□□ 1.51
PDZD8-201ENST00000334464 DAXXQ9UER7 740 aaPredicted RBP24.44■■□□□ 1.5
PDZD8-201ENST00000334464 YTHDC1Q96MU7 727 aaKnown RBP24.41■■□□□ 1.5
PDZD8-201ENST00000334464 TRIM26Q12899 539 aaPredicted RBP24.03■■□□□ 1.44
PDZD8-201ENST00000334464 MYT1LQ9UL68 1186 aa23.94■■□□□ 1.42
PDZD8-201ENST00000334464 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.83■■□□□ 1.4
PDZD8-201ENST00000334464 HNRNPUL2Q1KMD3 747 aaKnown RBP23.83■■□□□ 1.4
PDZD8-201ENST00000334464 ZNF316A6NFI3 1004 aaPredicted RBP23.77■■□□□ 1.4
PDZD8-201ENST00000334464 RTL5Q5HYW3 569 aaPredicted RBP23.73■■□□□ 1.39
PDZD8-201ENST00000334464 POLR3GLQ9BT43 218 aa23.72■■□□□ 1.39
PDZD8-201ENST00000334464 CLSPNQ9HAW4 1339 aa23.6■■□□□ 1.37
PDZD8-201ENST00000334464 HRCP23327 699 aa23.6■■□□□ 1.37
PDZD8-201ENST00000334464 ITGAEP38570 1179 aa23.58■■□□□ 1.37
PDZD8-201ENST00000334464 SLC4A1APQ9BWU0 796 aaKnown RBP23.52■■□□□ 1.36
PDZD8-201ENST00000334464 PPARGC1BQ86YN6 1023 aaKnown RBP23.46■■□□□ 1.35
PDZD8-201ENST00000334464 ZBTB47Q9UFB7 747 aaPredicted RBP23.39■■□□□ 1.34
PDZD8-201ENST00000334464 DIEXFQ68CQ4 756 aaKnown RBP23.25■■□□□ 1.31
PDZD8-201ENST00000334464 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
PDZD8-201ENST00000334464 FAM50AQ14320 339 aaKnown RBP23.18■■□□□ 1.3
PDZD8-201ENST00000334464 NEFMP07197 916 aa23.15■■□□□ 1.3
PDZD8-201ENST00000334464 CNGB1Q14028 1251 aaPredicted RBP23.14■■□□□ 1.29
PDZD8-201ENST00000334464 ANP32CO43423 234 aa23.12■■□□□ 1.29
PDZD8-201ENST00000334464 TRIM52Q96A61 297 aa23.11■■□□□ 1.29
PDZD8-201ENST00000334464 CDK11AQ9UQ88 783 aaPredicted RBP23.07■■□□□ 1.28
PDZD8-201ENST00000334464 CANXP27824 592 aaKnown RBP23.03■■□□□ 1.28
PDZD8-201ENST00000334464 LOC105371045A0A1W2PR82 267 aa22.97■■□□□ 1.27
PDZD8-201ENST00000334464 ANP32AP39687 249 aaKnown RBP22.86■■□□□ 1.25
PDZD8-201ENST00000334464 ANP32BQ92688 251 aaKnown RBP22.85■■□□□ 1.25
PDZD8-201ENST00000334464 NEUROD1Q13562 356 aa22.85■■□□□ 1.25
PDZD8-201ENST00000334464 ZNF326Q5BKZ1 582 aaKnown RBP22.82■■□□□ 1.24
PDZD8-201ENST00000334464 SLC24A1O60721 1099 aa22.76■■□□□ 1.23
PDZD8-201ENST00000334464 ABCC9O60706 1549 aa22.7■■□□□ 1.22
PDZD8-201ENST00000334464 BCANQ96GW7 911 aa22.69■■□□□ 1.22
PDZD8-201ENST00000334464 UPF2Q9HAU5 1272 aaKnown RBP22.68■■□□□ 1.22
PDZD8-201ENST00000334464 HSP90AA1P07900 732 aaKnown RBP22.63■■□□□ 1.21
PDZD8-201ENST00000334464 ESF1Q9H501 851 aaKnown RBP22.62■■□□□ 1.21
PDZD8-201ENST00000334464 FBLN2P98095 1184 aa22.59■■□□□ 1.21
PDZD8-201ENST00000334464 GTF3C3Q9Y5Q9 886 aa22.57■■□□□ 1.2
PDZD8-201ENST00000334464 CCDC180Q9P1Z9 1646 aa22.52■■□□□ 1.2
PDZD8-201ENST00000334464 GLIPR1L2Q4G1C9 344 aa22.5■■□□□ 1.19
PDZD8-201ENST00000334464 TONSLQ96HA7 1378 aa22.49■■□□□ 1.19
PDZD8-201ENST00000334464 PABPN1Q86U42 306 aaKnown RBP eCLIP22.43■■□□□ 1.18
PDZD8-201ENST00000334464 BCL11AQ9H165 835 aa22.4■■□□□ 1.18
PDZD8-201ENST00000334464 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.39■■□□□ 1.18
PDZD8-201ENST00000334464 ACIN1Q9UKV3 1341 aaKnown RBP22.38■■□□□ 1.17
PDZD8-201ENST00000334464 STAG3Q9UJ98 1225 aa22.37■■□□□ 1.17
PDZD8-201ENST00000334464 SCRIBQ14160 1630 aa22.35■■□□□ 1.17
PDZD8-201ENST00000334464 CSRNP3Q8WYN3 585 aa22.3■■□□□ 1.16
PDZD8-201ENST00000334464 ZNF777Q9ULD5 760 aaPredicted RBP22.29■■□□□ 1.16
PDZD8-201ENST00000334464 EIF5BO60841 1220 aaKnown RBP22.29■■□□□ 1.16
PDZD8-201ENST00000334464 NPM1P06748 294 aaKnown RBP eCLIP22.26■■□□□ 1.15
PDZD8-201ENST00000334464 MYH16Q9H6N6 1097 aa22.26■■□□□ 1.15
PDZD8-201ENST00000334464 CDK11BP21127 795 aaKnown RBP22.26■■□□□ 1.15
PDZD8-201ENST00000334464 NPM2Q86SE8 214 aaKnown RBP22.25■■□□□ 1.15
PDZD8-201ENST00000334464 DCAF1Q9Y4B6 1507 aa22.24■■□□□ 1.15
PDZD8-201ENST00000334464 ANP32EQ9BTT0 268 aa22.16■■□□□ 1.14
PDZD8-201ENST00000334464 WDR43Q15061 677 aaKnown RBP eCLIP22.15■■□□□ 1.14
PDZD8-201ENST00000334464 TMC1Q8TDI8 760 aa22.13■■□□□ 1.13
PDZD8-201ENST00000334464 HNRNPUQ00839 825 aaKnown RBP eCLIP22.13■■□□□ 1.13
PDZD8-201ENST00000334464 P3H3Q8IVL6 736 aa22.12■■□□□ 1.13
PDZD8-201ENST00000334464 CCDC136Q96JN2 1154 aa22.11■■□□□ 1.13
PDZD8-201ENST00000334464 CHGAP10645 457 aaKnown RBP22.08■■□□□ 1.12
PDZD8-201ENST00000334464 ARID3CA6NKF2 412 aa22.06■■□□□ 1.12
PDZD8-201ENST00000334464 FKBP8Q14318 412 aa22.05■■□□□ 1.12
PDZD8-201ENST00000334464 BECN1Q14457 450 aa22.05■■□□□ 1.12
PDZD8-201ENST00000334464 TSPY4P0CV99 314 aa22■■□□□ 1.11
PDZD8-201ENST00000334464 TSPY10P0CW01 314 aa22■■□□□ 1.11
PDZD8-201ENST00000334464 MTUS2Q5JR59 1369 aa22■■□□□ 1.11
PDZD8-201ENST00000334464 DDRGK1Q96HY6 314 aa21.99■■□□□ 1.11
PDZD8-201ENST00000334464 GOLGA6L22H0YM25 854 aa21.99■■□□□ 1.11
PDZD8-201ENST00000334464 NCLP19338 710 aaKnown RBP21.98■■□□□ 1.11
PDZD8-201ENST00000334464 FAM9BQ8IZU0 186 aa21.97■■□□□ 1.11
PDZD8-201ENST00000334464 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
PDZD8-201ENST00000334464 RB1CC1Q8TDY2 1594 aa21.95■■□□□ 1.1
PDZD8-201ENST00000334464 ZCCHC6Q5VYS8 1495 aaKnown RBP21.93■■□□□ 1.1
PDZD8-201ENST00000334464 CASC1Q6TDU7 716 aa21.91■■□□□ 1.1
PDZD8-201ENST00000334464 EEA1Q15075 1411 aa21.91■■□□□ 1.1
PDZD8-201ENST00000334464 CDCA8Q53HL2 280 aa21.9■■□□□ 1.1
PDZD8-201ENST00000334464 MRS2Q9HD23 443 aa21.89■■□□□ 1.09
PDZD8-201ENST00000334464 ZRSR1Q15695 479 aaKnown RBP21.88■■□□□ 1.09
PDZD8-201ENST00000334464 DDX10Q13206 875 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms