RNA–Protein interactions for RNA: ENST00000620315.1

DDX21-202, Transcript of DExD-box helicase 21, humanhuman

TSL 1 (best) BASIC

Gene DDX21, Length 4,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX21-202ENST00000620315 NISCHQ9Y2I1 1504 aa26.51■■□□□ 1.83
DDX21-202ENST00000620315 DCAF8L2P0C7V8 631 aa26.4■■□□□ 1.82
DDX21-202ENST00000620315 SUPT5HO00267 1087 aaKnown RBP24.31■■□□□ 1.48
DDX21-202ENST00000620315 SHROOM4Q9ULL8 1493 aa24.28■■□□□ 1.48
DDX21-202ENST00000620315 FAM9AQ8IZU1 332 aaPredicted RBP23.3■■□□□ 1.32
DDX21-202ENST00000620315 ABCC9O60706 1549 aa23.22■■□□□ 1.31
DDX21-202ENST00000620315 EHMT2Q96KQ7 1210 aa23.08■■□□□ 1.29
DDX21-202ENST00000620315 APLP2Q06481 763 aa22.99■■□□□ 1.27
DDX21-202ENST00000620315 TRIM41Q8WV44 630 aa22.75■■□□□ 1.23
DDX21-202ENST00000620315 PABPN1Q86U42 306 aaKnown RBP eCLIP22.74■■□□□ 1.23
DDX21-202ENST00000620315 RANGAP1P46060 587 aaPredicted RBP22.49■■□□□ 1.19
DDX21-202ENST00000620315 ATP1B4Q9UN42 357 aaPredicted RBP22.43■■□□□ 1.18
DDX21-202ENST00000620315 UBTFP17480 764 aaKnown RBP22.43■■□□□ 1.18
DDX21-202ENST00000620315 CCDC180Q9P1Z9 1646 aa22.21■■□□□ 1.15
DDX21-202ENST00000620315 TTBK1Q5TCY1 1321 aaPredicted RBP22.15■■□□□ 1.14
DDX21-202ENST00000620315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.99■■□□□ 1.11
DDX21-202ENST00000620315 HNRNPUL2Q1KMD3 747 aaKnown RBP21.99■■□□□ 1.11
DDX21-202ENST00000620315 SCRIBQ14160 1630 aa21.92■■□□□ 1.1
DDX21-202ENST00000620315 ZCCHC6Q5VYS8 1495 aaKnown RBP21.89■■□□□ 1.09
DDX21-202ENST00000620315 RB1CC1Q8TDY2 1594 aa21.88■■□□□ 1.09
DDX21-202ENST00000620315 MYT1LQ9UL68 1186 aa21.84■■□□□ 1.09
DDX21-202ENST00000620315 FBLN2P98095 1184 aa21.71■■□□□ 1.07
DDX21-202ENST00000620315 NACADO15069 1562 aa21.67■■□□□ 1.06
DDX21-202ENST00000620315 PCGF6Q9BYE7 350 aa21.65■■□□□ 1.06
DDX21-202ENST00000620315 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
DDX21-202ENST00000620315 CCER1Q8TC90 406 aaPredicted RBP21.49■■□□□ 1.03
DDX21-202ENST00000620315 ITGAEP38570 1179 aa21.37■■□□□ 1.01
DDX21-202ENST00000620315 PPARGC1BQ86YN6 1023 aaKnown RBP21.37■■□□□ 1.01
DDX21-202ENST00000620315 ZEB1P37275 1124 aaPredicted RBP21.34■■□□□ 1.01
DDX21-202ENST00000620315 LOC105371045A0A1W2PR82 267 aa21.32■■□□□ 1
DDX21-202ENST00000620315 CSRNP3Q8WYN3 585 aa21.19■□□□□ 0.98
DDX21-202ENST00000620315 DCAF1Q9Y4B6 1507 aa21.17■□□□□ 0.98
DDX21-202ENST00000620315 NPM1P06748 294 aaKnown RBP eCLIP21.17■□□□□ 0.98
DDX21-202ENST00000620315 TRIM26Q12899 539 aaPredicted RBP21.11■□□□□ 0.97
DDX21-202ENST00000620315 BAZ1BQ9UIG0 1483 aaKnown RBP21.1■□□□□ 0.97
DDX21-202ENST00000620315 CDK11AQ9UQ88 783 aaPredicted RBP21.1■□□□□ 0.97
DDX21-202ENST00000620315 FAM50AQ14320 339 aaKnown RBP21.08■□□□□ 0.97
DDX21-202ENST00000620315 PELP1Q8IZL8 1130 aaKnown RBP21.08■□□□□ 0.96
DDX21-202ENST00000620315 CHMP7Q8WUX9 453 aaPredicted RBP21.05■□□□□ 0.96
DDX21-202ENST00000620315 P3H3Q8IVL6 736 aa21.04■□□□□ 0.96
DDX21-202ENST00000620315 ERCC6Q03468 1493 aa20.99■□□□□ 0.95
DDX21-202ENST00000620315 ARID3CA6NKF2 412 aa20.94■□□□□ 0.94
DDX21-202ENST00000620315 RSF1Q96T23 1441 aaPredicted RBP20.92■□□□□ 0.94
DDX21-202ENST00000620315 BAZ1AQ9NRL2 1556 aaPredicted RBP20.92■□□□□ 0.94
DDX21-202ENST00000620315 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
DDX21-202ENST00000620315 ESF1Q9H501 851 aaKnown RBP20.84■□□□□ 0.93
DDX21-202ENST00000620315 POLR3GLQ9BT43 218 aa20.83■□□□□ 0.93
DDX21-202ENST00000620315 MYO15BQ96JP2 1530 aa20.82■□□□□ 0.92
DDX21-202ENST00000620315 ZNF777Q9ULD5 760 aaPredicted RBP20.79■□□□□ 0.92
DDX21-202ENST00000620315 SLC4A1APQ9BWU0 796 aaKnown RBP20.7■□□□□ 0.9
DDX21-202ENST00000620315 CECR2Q9BXF3 1484 aa20.69■□□□□ 0.9
DDX21-202ENST00000620315 SMARCA2P51531 1590 aa20.66■□□□□ 0.9
DDX21-202ENST00000620315 WRNQ14191 1432 aaPredicted RBP eCLIP20.65■□□□□ 0.9
DDX21-202ENST00000620315 PDS5BQ9NTI5 1447 aa20.64■□□□□ 0.89
DDX21-202ENST00000620315 CENPBP07199 599 aaPredicted RBP20.64■□□□□ 0.89
DDX21-202ENST00000620315 BCANQ96GW7 911 aa20.63■□□□□ 0.89
DDX21-202ENST00000620315 KIF27Q86VH2 1401 aa20.57■□□□□ 0.88
DDX21-202ENST00000620315 EEA1Q15075 1411 aa20.55■□□□□ 0.88
DDX21-202ENST00000620315 PLEKHD1A6NEE1 506 aa20.49■□□□□ 0.87
DDX21-202ENST00000620315 STAG3Q9UJ98 1225 aa20.49■□□□□ 0.87
DDX21-202ENST00000620315 TSPY4P0CV99 314 aa20.48■□□□□ 0.87
DDX21-202ENST00000620315 TSPY10P0CW01 314 aa20.48■□□□□ 0.87
DDX21-202ENST00000620315 NEUROD1Q13562 356 aa20.48■□□□□ 0.87
DDX21-202ENST00000620315 ZNF326Q5BKZ1 582 aaKnown RBP20.48■□□□□ 0.87
DDX21-202ENST00000620315 NEFLP07196 543 aa20.46■□□□□ 0.87
DDX21-202ENST00000620315 MTUS2Q5JR59 1369 aa20.45■□□□□ 0.86
DDX21-202ENST00000620315 KCNH8Q96L42 1107 aa20.43■□□□□ 0.86
DDX21-202ENST00000620315 CNGB1Q14028 1251 aaPredicted RBP20.42■□□□□ 0.86
DDX21-202ENST00000620315 PLPPR3Q6T4P5 718 aa20.42■□□□□ 0.86
DDX21-202ENST00000620315 MROH2BQ7Z745 1585 aa20.41■□□□□ 0.86
DDX21-202ENST00000620315 CADPSQ9ULU8 1353 aa20.37■□□□□ 0.85
DDX21-202ENST00000620315 CHGAP10645 457 aaKnown RBP20.36■□□□□ 0.85
DDX21-202ENST00000620315 CLIP1P30622 1438 aa20.34■□□□□ 0.85
DDX21-202ENST00000620315 ATAD2BQ9ULI0 1458 aa20.3■□□□□ 0.84
DDX21-202ENST00000620315 GOLGA3Q08378 1498 aa20.3■□□□□ 0.84
DDX21-202ENST00000620315 CUX2O14529 1486 aa20.3■□□□□ 0.84
DDX21-202ENST00000620315 TRHP20396 242 aaPredicted RBP20.28■□□□□ 0.84
DDX21-202ENST00000620315 CCDC88BA6NC98 1476 aa20.28■□□□□ 0.84
DDX21-202ENST00000620315 YTHDC1Q96MU7 727 aaKnown RBP20.27■□□□□ 0.84
DDX21-202ENST00000620315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.26■□□□□ 0.835e-7■■□□□ 13.9
DDX21-202ENST00000620315 SOGA1O94964 1423 aa20.24■□□□□ 0.83
DDX21-202ENST00000620315 CARMIL1Q5VZK9 1371 aa20.24■□□□□ 0.83
DDX21-202ENST00000620315 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
DDX21-202ENST00000620315 HRCP23327 699 aa20.23■□□□□ 0.83
DDX21-202ENST00000620315 CHIC2Q9UKJ5 165 aa20.23■□□□□ 0.83
DDX21-202ENST00000620315 ARID4BQ4LE39 1312 aaPredicted RBP20.2■□□□□ 0.82
DDX21-202ENST00000620315 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
DDX21-202ENST00000620315 TDRD9Q8NDG6 1382 aaKnown RBP20.16■□□□□ 0.82
DDX21-202ENST00000620315 CFDP1Q9UEE9 299 aaPredicted RBP20.16■□□□□ 0.82
DDX21-202ENST00000620315 CARMIL2Q6F5E8 1435 aa20.14■□□□□ 0.82
DDX21-202ENST00000620315 SMARCA4P51532 1647 aa20.11■□□□□ 0.81
DDX21-202ENST00000620315 ACIN1Q9UKV3 1341 aaKnown RBP20.1■□□□□ 0.81
DDX21-202ENST00000620315 EIF4G1Q04637 1599 aaKnown RBP20.1■□□□□ 0.81
DDX21-202ENST00000620315 NEFMP07197 916 aa20.09■□□□□ 0.81
DDX21-202ENST00000620315 TNIKQ9UKE5 1360 aa20.06■□□□□ 0.8
DDX21-202ENST00000620315 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
DDX21-202ENST00000620315 TONSLQ96HA7 1378 aa20.05■□□□□ 0.8
DDX21-202ENST00000620315 CEP162Q5TB80 1403 aa20.04■□□□□ 0.8
DDX21-202ENST00000620315 FHAD1B1AJZ9 1412 aa20.03■□□□□ 0.8
DDX21-202ENST00000620315 FANCD2Q9BXW9 1451 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms