RNA–Protein interactions for RNA: ENST00000381227.5

POLR2B-202, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene POLR2B, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-202ENST00000381227 NISCHQ9Y2I1 1504 aa13.48□□□□□ -0.25
POLR2B-202ENST00000381227 DCAF8L2P0C7V8 631 aa11.69□□□□□ -0.54
POLR2B-202ENST00000381227 SHROOM4Q9ULL8 1493 aa11.67□□□□□ -0.54
POLR2B-202ENST00000381227 CCDC180Q9P1Z9 1646 aa11.59□□□□□ -0.55
POLR2B-202ENST00000381227 SUPT5HO00267 1087 aaKnown RBP11.5□□□□□ -0.57
POLR2B-202ENST00000381227 ABCC9O60706 1549 aa11.36□□□□□ -0.59
POLR2B-202ENST00000381227 ZCCHC6Q5VYS8 1495 aaKnown RBP11.29□□□□□ -0.6
POLR2B-202ENST00000381227 DCAF1Q9Y4B6 1507 aa10.96□□□□□ -0.66
POLR2B-202ENST00000381227 SCRIBQ14160 1630 aa10.93□□□□□ -0.66
POLR2B-202ENST00000381227 CHIC1Q5VXU3 224 aa10.88□□□□□ -0.67
POLR2B-202ENST00000381227 NACADO15069 1562 aa10.84□□□□□ -0.67
POLR2B-202ENST00000381227 PABPN1Q86U42 306 aaKnown RBP eCLIP10.81□□□□□ -0.68
POLR2B-202ENST00000381227 MYO15BQ96JP2 1530 aa10.8□□□□□ -0.68
POLR2B-202ENST00000381227 RB1CC1Q8TDY2 1594 aa10.79□□□□□ -0.68
POLR2B-202ENST00000381227 UNC13AQ9UPW8 1703 aa10.73□□□□□ -0.69
POLR2B-202ENST00000381227 EHMT2Q96KQ7 1210 aa10.73□□□□□ -0.69
POLR2B-202ENST00000381227 PCGF6Q9BYE7 350 aa10.7□□□□□ -0.7
POLR2B-202ENST00000381227 FAM9AQ8IZU1 332 aaPredicted RBP10.7□□□□□ -0.7
POLR2B-202ENST00000381227 LOC105371045A0A1W2PR82 267 aa10.67□□□□□ -0.7
POLR2B-202ENST00000381227 TRIM41Q8WV44 630 aa10.67□□□□□ -0.7
POLR2B-202ENST00000381227 CECR2Q9BXF3 1484 aa10.67□□□□□ -0.7
POLR2B-202ENST00000381227 BICRAQ9NZM4 1560 aa10.64□□□□□ -0.71
POLR2B-202ENST00000381227 MROH2BQ7Z745 1585 aa10.53□□□□□ -0.72
POLR2B-202ENST00000381227 RSF1Q96T23 1441 aaPredicted RBP10.52□□□□□ -0.73
POLR2B-202ENST00000381227 HRCP23327 699 aa10.47□□□□□ -0.73
POLR2B-202ENST00000381227 WIZO95785 1651 aa10.45□□□□□ -0.74
POLR2B-202ENST00000381227 TRIM26Q12899 539 aaPredicted RBP10.4□□□□□ -0.74
POLR2B-202ENST00000381227 PPARGC1BQ86YN6 1023 aaKnown RBP10.36□□□□□ -0.75
POLR2B-202ENST00000381227 SMARCA4P51532 1647 aa10.36□□□□□ -0.75
POLR2B-202ENST00000381227 TTBK1Q5TCY1 1321 aaPredicted RBP10.35□□□□□ -0.75
POLR2B-202ENST00000381227 BAZ1AQ9NRL2 1556 aaPredicted RBP10.34□□□□□ -0.75
POLR2B-202ENST00000381227 DNAJC5BQ9UF47 199 aa10.32□□□□□ -0.76
POLR2B-202ENST00000381227 EIF4G1Q04637 1599 aaKnown RBP10.28□□□□□ -0.76
POLR2B-202ENST00000381227 UBTFP17480 764 aaKnown RBP10.27□□□□□ -0.76
POLR2B-202ENST00000381227 ATAD2BQ9ULI0 1458 aa10.24□□□□□ -0.77
POLR2B-202ENST00000381227 RANGAP1P46060 587 aaPredicted RBP10.22□□□□□ -0.77
POLR2B-202ENST00000381227 ZEB1P37275 1124 aaPredicted RBP10.2□□□□□ -0.78
POLR2B-202ENST00000381227 CCDC88BA6NC98 1476 aa10.2□□□□□ -0.78
POLR2B-202ENST00000381227 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
POLR2B-202ENST00000381227 CC2D2AQ9P2K1 1620 aa10.17□□□□□ -0.78
POLR2B-202ENST00000381227 CCER1Q8TC90 406 aaPredicted RBP10.16□□□□□ -0.78
POLR2B-202ENST00000381227 SMARCA2P51531 1590 aa10.15□□□□□ -0.78
POLR2B-202ENST00000381227 BAZ1BQ9UIG0 1483 aaKnown RBP10.15□□□□□ -0.78
POLR2B-202ENST00000381227 PEG3Q9GZU2 1588 aa10.14□□□□□ -0.79
POLR2B-202ENST00000381227 APLP2Q06481 763 aa10.14□□□□□ -0.79
POLR2B-202ENST00000381227 CSRNP3Q8WYN3 585 aa10.1□□□□□ -0.79
POLR2B-202ENST00000381227 NCAPD3P42695 1498 aa10.09□□□□□ -0.79
POLR2B-202ENST00000381227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.09□□□□□ -0.79
POLR2B-202ENST00000381227 ABCC8Q09428 1581 aa10.07□□□□□ -0.8
POLR2B-202ENST00000381227 SOGA1O94964 1423 aa10.01□□□□□ -0.81
POLR2B-202ENST00000381227 HMGXB3Q12766 1538 aa10□□□□□ -0.81
POLR2B-202ENST00000381227 NESP48681 1621 aa10□□□□□ -0.81
POLR2B-202ENST00000381227 WRNQ14191 1432 aaPredicted RBP eCLIP9.99□□□□□ -0.81
POLR2B-202ENST00000381227 HNRNPUL2Q1KMD3 747 aaKnown RBP9.98□□□□□ -0.81
POLR2B-202ENST00000381227 CEP162Q5TB80 1403 aa9.97□□□□□ -0.81
POLR2B-202ENST00000381227 EEA1Q15075 1411 aa9.94□□□□□ -0.82
POLR2B-202ENST00000381227 TNIKQ9UKE5 1360 aa9.92□□□□□ -0.82
POLR2B-202ENST00000381227 RUSC2Q8N2Y8 1516 aa9.91□□□□□ -0.82
POLR2B-202ENST00000381227 GOLGA3Q08378 1498 aa9.91□□□□□ -0.82
POLR2B-202ENST00000381227 ATP1B4Q9UN42 357 aaPredicted RBP9.89□□□□□ -0.83
POLR2B-202ENST00000381227 CFTRP13569 1480 aa9.89□□□□□ -0.83
POLR2B-202ENST00000381227 SYNJ1O43426 1573 aa9.88□□□□□ -0.83
POLR2B-202ENST00000381227 CADPSQ9ULU8 1353 aa9.88□□□□□ -0.83
POLR2B-202ENST00000381227 CLIP1P30622 1438 aa9.86□□□□□ -0.83
POLR2B-202ENST00000381227 CEP164Q9UPV0 1460 aa9.85□□□□□ -0.83
POLR2B-202ENST00000381227 ITGAEP38570 1179 aa9.84□□□□□ -0.83
POLR2B-202ENST00000381227 CUX1P39880 1505 aa9.81□□□□□ -0.84
POLR2B-202ENST00000381227 DIEXFQ68CQ4 756 aaKnown RBP9.81□□□□□ -0.84
POLR2B-202ENST00000381227 FANCD2Q9BXW9 1451 aa9.79□□□□□ -0.84
POLR2B-202ENST00000381227 CENPBP07199 599 aaPredicted RBP9.76□□□□□ -0.85
POLR2B-202ENST00000381227 YTHDC1Q96MU7 727 aaKnown RBP9.76□□□□□ -0.85
POLR2B-202ENST00000381227 RAPGEF2Q9Y4G8 1499 aa9.75□□□□□ -0.85
POLR2B-202ENST00000381227 KIF21AQ7Z4S6 1674 aa9.75□□□□□ -0.85
POLR2B-202ENST00000381227 P3H3Q8IVL6 736 aa9.74□□□□□ -0.85
POLR2B-202ENST00000381227 KIF27Q86VH2 1401 aa9.73□□□□□ -0.85
POLR2B-202ENST00000381227 RAD54L2Q9Y4B4 1467 aa9.73□□□□□ -0.85
POLR2B-202ENST00000381227 URB2Q14146 1524 aaKnown RBP9.73□□□□□ -0.85
POLR2B-202ENST00000381227 TOP2BQ02880 1626 aa9.72□□□□□ -0.85
POLR2B-202ENST00000381227 SLC24A1O60721 1099 aa9.72□□□□□ -0.85
POLR2B-202ENST00000381227 VPS8Q8N3P4 1428 aa9.72□□□□□ -0.85
POLR2B-202ENST00000381227 ZNF316A6NFI3 1004 aaPredicted RBP9.71□□□□□ -0.86
POLR2B-202ENST00000381227 LAMC3Q9Y6N6 1575 aa9.7□□□□□ -0.86
POLR2B-202ENST00000381227 FGD5Q6ZNL6 1462 aa9.69□□□□□ -0.86
POLR2B-202ENST00000381227 PRDM2Q13029 1718 aa9.69□□□□□ -0.86
POLR2B-202ENST00000381227 FAM50AQ14320 339 aaKnown RBP9.68□□□□□ -0.86
POLR2B-202ENST00000381227 BIVM-ERCC5R4GMW8 1640 aa9.68□□□□□ -0.86
POLR2B-202ENST00000381227 TOPBP1Q92547 1522 aa9.68□□□□□ -0.86
POLR2B-202ENST00000381227 CUX2O14529 1486 aa9.66□□□□□ -0.86
POLR2B-202ENST00000381227 POLA1P09884 1462 aaPredicted RBP9.66□□□□□ -0.86
POLR2B-202ENST00000381227 PDS5BQ9NTI5 1447 aa9.65□□□□□ -0.86
POLR2B-202ENST00000381227 TDRD9Q8NDG6 1382 aaKnown RBP9.65□□□□□ -0.87
POLR2B-202ENST00000381227 KIF21BO75037 1637 aa9.64□□□□□ -0.87
POLR2B-202ENST00000381227 KANK4Q5T7N3 995 aaPredicted RBP9.64□□□□□ -0.87
POLR2B-202ENST00000381227 ERCC6Q03468 1493 aa9.62□□□□□ -0.87
POLR2B-202ENST00000381227 DNMBPQ6XZF7 1577 aa9.61□□□□□ -0.87
POLR2B-202ENST00000381227 CARMIL1Q5VZK9 1371 aa9.61□□□□□ -0.87
POLR2B-202ENST00000381227 ACIN1Q9UKV3 1341 aaKnown RBP9.6□□□□□ -0.87
POLR2B-202ENST00000381227 ZNF608Q9ULD9 1512 aaPredicted RBP9.59□□□□□ -0.87
POLR2B-202ENST00000381227 IGF1RP08069 1367 aa9.58□□□□□ -0.88
POLR2B-202ENST00000381227 AQRO60306 1485 aaKnown RBP eCLIP9.58□□□□□ -0.887e-7■■■■□ 20.3
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms