RNA–Protein interactions for RNA: ENST00000472644.6

ALCAM-205, Transcript of activated leukocyte cell adhesion molecule, humanhuman

TSL 1 (best) BASIC

Gene ALCAM, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-205ENST00000472644 NISCHQ9Y2I1 1504 aa12.14□□□□□ -0.47
ALCAM-205ENST00000472644 DCAF8L2P0C7V8 631 aa10.74□□□□□ -0.69
ALCAM-205ENST00000472644 SHROOM4Q9ULL8 1493 aa10.5□□□□□ -0.73
ALCAM-205ENST00000472644 ABCC9O60706 1549 aa10.37□□□□□ -0.75
ALCAM-205ENST00000472644 CCDC180Q9P1Z9 1646 aa10.33□□□□□ -0.76
ALCAM-205ENST00000472644 ZCCHC6Q5VYS8 1495 aaKnown RBP10.14□□□□□ -0.79
ALCAM-205ENST00000472644 SUPT5HO00267 1087 aaKnown RBP10.1□□□□□ -0.79
ALCAM-205ENST00000472644 PABPN1Q86U42 306 aaKnown RBP eCLIP9.96□□□□□ -0.81
ALCAM-205ENST00000472644 SCRIBQ14160 1630 aa9.95□□□□□ -0.82
ALCAM-205ENST00000472644 DCAF1Q9Y4B6 1507 aa9.74□□□□□ -0.85
ALCAM-205ENST00000472644 NACADO15069 1562 aa9.73□□□□□ -0.85
ALCAM-205ENST00000472644 RB1CC1Q8TDY2 1594 aa9.73□□□□□ -0.85
ALCAM-205ENST00000472644 CECR2Q9BXF3 1484 aa9.67□□□□□ -0.86
ALCAM-205ENST00000472644 UNC13AQ9UPW8 1703 aa9.59□□□□□ -0.87
ALCAM-205ENST00000472644 MYO15BQ96JP2 1530 aa9.57□□□□□ -0.88
ALCAM-205ENST00000472644 EHMT2Q96KQ7 1210 aa9.55□□□□□ -0.88
ALCAM-205ENST00000472644 RSF1Q96T23 1441 aaPredicted RBP9.53□□□□□ -0.88
ALCAM-205ENST00000472644 MROH2BQ7Z745 1585 aa9.52□□□□□ -0.88
ALCAM-205ENST00000472644 BICRAQ9NZM4 1560 aa9.51□□□□□ -0.89
ALCAM-205ENST00000472644 WIZO95785 1651 aa9.46□□□□□ -0.9
ALCAM-205ENST00000472644 FAM9AQ8IZU1 332 aaPredicted RBP9.43□□□□□ -0.9
ALCAM-205ENST00000472644 DNAJC5BQ9UF47 199 aa9.4□□□□□ -0.9
ALCAM-205ENST00000472644 CHIC1Q5VXU3 224 aa9.4□□□□□ -0.9
ALCAM-205ENST00000472644 SMARCA4P51532 1647 aa9.33□□□□□ -0.92
ALCAM-205ENST00000472644 BAZ1AQ9NRL2 1556 aaPredicted RBP9.33□□□□□ -0.92
ALCAM-205ENST00000472644 LOC105371045A0A1W2PR82 267 aa9.3□□□□□ -0.92
ALCAM-205ENST00000472644 TRIM41Q8WV44 630 aa9.29□□□□□ -0.92
ALCAM-205ENST00000472644 EIF4G1Q04637 1599 aaKnown RBP9.25□□□□□ -0.93
ALCAM-205ENST00000472644 CCDC88BA6NC98 1476 aa9.24□□□□□ -0.93
ALCAM-205ENST00000472644 ATAD2BQ9ULI0 1458 aa9.24□□□□□ -0.93
ALCAM-205ENST00000472644 BAZ1BQ9UIG0 1483 aaKnown RBP9.22□□□□□ -0.93
ALCAM-205ENST00000472644 ABCC8Q09428 1581 aa9.18□□□□□ -0.94
ALCAM-205ENST00000472644 CC2D2AQ9P2K1 1620 aa9.17□□□□□ -0.94
ALCAM-205ENST00000472644 RANGAP1P46060 587 aaPredicted RBP9.17□□□□□ -0.94
ALCAM-205ENST00000472644 TOP2AP11388 1531 aaKnown RBP9.16□□□□□ -0.94
ALCAM-205ENST00000472644 SMARCA2P51531 1590 aa9.14□□□□□ -0.95
ALCAM-205ENST00000472644 NESP48681 1621 aa9.09□□□□□ -0.95
ALCAM-205ENST00000472644 PPARGC1BQ86YN6 1023 aaKnown RBP9.09□□□□□ -0.96
ALCAM-205ENST00000472644 TTBK1Q5TCY1 1321 aaPredicted RBP9.07□□□□□ -0.96
ALCAM-205ENST00000472644 NCAPD3P42695 1498 aa9.06□□□□□ -0.96
ALCAM-205ENST00000472644 RUSC2Q8N2Y8 1516 aa9.03□□□□□ -0.96
ALCAM-205ENST00000472644 SOGA1O94964 1423 aa9.02□□□□□ -0.97
ALCAM-205ENST00000472644 PEG3Q9GZU2 1588 aa9.01□□□□□ -0.97
ALCAM-205ENST00000472644 UBTFP17480 764 aaKnown RBP8.98□□□□□ -0.97
ALCAM-205ENST00000472644 WRNQ14191 1432 aaPredicted RBP eCLIP8.98□□□□□ -0.97
ALCAM-205ENST00000472644 CADPSQ9ULU8 1353 aa8.95□□□□□ -0.98
ALCAM-205ENST00000472644 HMGXB3Q12766 1538 aa8.95□□□□□ -0.98
ALCAM-205ENST00000472644 SYNJ1O43426 1573 aa8.93□□□□□ -0.98
ALCAM-205ENST00000472644 CFTRP13569 1480 aa8.9□□□□□ -0.99
ALCAM-205ENST00000472644 CSRNP3Q8WYN3 585 aa8.9□□□□□ -0.99
ALCAM-205ENST00000472644 FANCD2Q9BXW9 1451 aa8.89□□□□□ -0.99
ALCAM-205ENST00000472644 RAD54L2Q9Y4B4 1467 aa8.86□□□□□ -0.99
ALCAM-205ENST00000472644 CUX1P39880 1505 aa8.86□□□□□ -0.99
ALCAM-205ENST00000472644 P3H3Q8IVL6 736 aa8.85□□□□□ -0.99
ALCAM-205ENST00000472644 PCGF6Q9BYE7 350 aa8.85□□□□□ -0.99
ALCAM-205ENST00000472644 TDRD9Q8NDG6 1382 aaKnown RBP8.85□□□□□ -0.99
ALCAM-205ENST00000472644 FBLN2P98095 1184 aa8.83□□□□□ -1
ALCAM-205ENST00000472644 ERCC6Q03468 1493 aa8.82□□□□□ -1
ALCAM-205ENST00000472644 ATP1B4Q9UN42 357 aaPredicted RBP8.8□□□□□ -1
ALCAM-205ENST00000472644 CUX2O14529 1486 aa8.8□□□□□ -1
ALCAM-205ENST00000472644 FGD5Q6ZNL6 1462 aa8.8□□□□□ -1
ALCAM-205ENST00000472644 CEP164Q9UPV0 1460 aa8.79□□□□□ -1
ALCAM-205ENST00000472644 KIF21AQ7Z4S6 1674 aa8.78□□□□□ -1
ALCAM-205ENST00000472644 URB2Q14146 1524 aaKnown RBP8.78□□□□□ -1
ALCAM-205ENST00000472644 ARID3CA6NKF2 412 aa8.77□□□□□ -1
ALCAM-205ENST00000472644 PDS5BQ9NTI5 1447 aa8.77□□□□□ -1.01
ALCAM-205ENST00000472644 RAPGEF2Q9Y4G8 1499 aa8.77□□□□□ -1.01
ALCAM-205ENST00000472644 TOP2BQ02880 1626 aa8.75□□□□□ -1.01
ALCAM-205ENST00000472644 TOPBP1Q92547 1522 aa8.75□□□□□ -1.01
ALCAM-205ENST00000472644 AQRO60306 1485 aaKnown RBP eCLIP8.75□□□□□ -1.01
ALCAM-205ENST00000472644 POLA1P09884 1462 aaPredicted RBP8.74□□□□□ -1.01
ALCAM-205ENST00000472644 LAMC3Q9Y6N6 1575 aa8.71□□□□□ -1.02
ALCAM-205ENST00000472644 KIF27Q86VH2 1401 aa8.71□□□□□ -1.02
ALCAM-205ENST00000472644 ZNF608Q9ULD9 1512 aaPredicted RBP8.7□□□□□ -1.02
ALCAM-205ENST00000472644 IGF1RP08069 1367 aa8.7□□□□□ -1.02
ALCAM-205ENST00000472644 CEP162Q5TB80 1403 aa8.69□□□□□ -1.02
ALCAM-205ENST00000472644 BIVM-ERCC5R4GMW8 1640 aa8.67□□□□□ -1.02
ALCAM-205ENST00000472644 CARMIL1Q5VZK9 1371 aa8.67□□□□□ -1.02
ALCAM-205ENST00000472644 DNMBPQ6XZF7 1577 aa8.66□□□□□ -1.02
ALCAM-205ENST00000472644 GOLGA3Q08378 1498 aa8.66□□□□□ -1.02
ALCAM-205ENST00000472644 PRDM2Q13029 1718 aa8.64□□□□□ -1.03
ALCAM-205ENST00000472644 MRC2Q9UBG0 1479 aa8.64□□□□□ -1.03
ALCAM-205ENST00000472644 CLIP1P30622 1438 aa8.63□□□□□ -1.03
ALCAM-205ENST00000472644 CHMP7Q8WUX9 453 aaPredicted RBP8.63□□□□□ -1.03
ALCAM-205ENST00000472644 ITGAEP38570 1179 aa8.62□□□□□ -1.03
ALCAM-205ENST00000472644 TNIKQ9UKE5 1360 aa8.62□□□□□ -1.03
ALCAM-205ENST00000472644 GAPVD1Q14C86 1478 aa8.62□□□□□ -1.03
ALCAM-205ENST00000472644 EEA1Q15075 1411 aa8.6□□□□□ -1.03
ALCAM-205ENST00000472644 APLP2Q06481 763 aa8.6□□□□□ -1.03
ALCAM-205ENST00000472644 HNRNPUL2Q1KMD3 747 aaKnown RBP8.59□□□□□ -1.03
ALCAM-205ENST00000472644 PRXQ9BXM0 1461 aa8.58□□□□□ -1.04
ALCAM-205ENST00000472644 KANK4Q5T7N3 995 aaPredicted RBP8.58□□□□□ -1.04
ALCAM-205ENST00000472644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.58□□□□□ -1.04
ALCAM-205ENST00000472644 ABCA10Q8WWZ4 1543 aa8.57□□□□□ -1.04
ALCAM-205ENST00000472644 FHOD3Q2V2M9 1422 aa8.56□□□□□ -1.04
ALCAM-205ENST00000472644 TRIM26Q12899 539 aaPredicted RBP8.56□□□□□ -1.04
ALCAM-205ENST00000472644 SNAPC4Q5SXM2 1469 aa8.54□□□□□ -1.04
ALCAM-205ENST00000472644 TARBP1Q13395 1621 aaKnown RBP8.54□□□□□ -1.04
ALCAM-205ENST00000472644 ARAP1Q96P48 1450 aa8.54□□□□□ -1.04
ALCAM-205ENST00000472644 THOC2Q8NI27 1593 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms