RNA–Protein interactions for RNA: ENST00000354185.8

DDX21-201, Transcript of DExD-box helicase 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX21, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX21-201ENST00000354185 NISCHQ9Y2I1 1504 aa16.66■□□□□ 0.26
DDX21-201ENST00000354185 DCAF8L2P0C7V8 631 aa15.42■□□□□ 0.06
DDX21-201ENST00000354185 SHROOM4Q9ULL8 1493 aa14.8□□□□□ -0.04
DDX21-201ENST00000354185 SUPT5HO00267 1087 aaKnown RBP14.49□□□□□ -0.09
DDX21-201ENST00000354185 ABCC9O60706 1549 aa14.27□□□□□ -0.12
DDX21-201ENST00000354185 CCDC180Q9P1Z9 1646 aa14.04□□□□□ -0.16
DDX21-201ENST00000354185 ZCCHC6Q5VYS8 1495 aaKnown RBP13.87□□□□□ -0.19
DDX21-201ENST00000354185 PABPN1Q86U42 306 aaKnown RBP eCLIP13.83□□□□□ -0.19
DDX21-201ENST00000354185 EHMT2Q96KQ7 1210 aa13.72□□□□□ -0.21
DDX21-201ENST00000354185 SCRIBQ14160 1630 aa13.65□□□□□ -0.22
DDX21-201ENST00000354185 FAM9AQ8IZU1 332 aaPredicted RBP13.55□□□□□ -0.24
DDX21-201ENST00000354185 RB1CC1Q8TDY2 1594 aa13.41□□□□□ -0.26
DDX21-201ENST00000354185 TRIM41Q8WV44 630 aa13.41□□□□□ -0.26
DDX21-201ENST00000354185 NACADO15069 1562 aa13.38□□□□□ -0.27
DDX21-201ENST00000354185 DCAF1Q9Y4B6 1507 aa13.33□□□□□ -0.27
DDX21-201ENST00000354185 CHIC1Q5VXU3 224 aa13.3□□□□□ -0.28
DDX21-201ENST00000354185 RANGAP1P46060 587 aaPredicted RBP13.22□□□□□ -0.29
DDX21-201ENST00000354185 CECR2Q9BXF3 1484 aa13.18□□□□□ -0.3
DDX21-201ENST00000354185 LOC105371045A0A1W2PR82 267 aa13.15□□□□□ -0.3
DDX21-201ENST00000354185 RSF1Q96T23 1441 aaPredicted RBP13.14□□□□□ -0.31
DDX21-201ENST00000354185 TTBK1Q5TCY1 1321 aaPredicted RBP13.12□□□□□ -0.31
DDX21-201ENST00000354185 MYO15BQ96JP2 1530 aa13.07□□□□□ -0.32
DDX21-201ENST00000354185 UBTFP17480 764 aaKnown RBP13.05□□□□□ -0.32
DDX21-201ENST00000354185 MROH2BQ7Z745 1585 aa12.99□□□□□ -0.33
DDX21-201ENST00000354185 PPARGC1BQ86YN6 1023 aaKnown RBP12.96□□□□□ -0.33
DDX21-201ENST00000354185 BAZ1AQ9NRL2 1556 aaPredicted RBP12.91□□□□□ -0.34
DDX21-201ENST00000354185 PCGF6Q9BYE7 350 aa12.89□□□□□ -0.35
DDX21-201ENST00000354185 ATP1B4Q9UN42 357 aaPredicted RBP12.86□□□□□ -0.35
DDX21-201ENST00000354185 APLP2Q06481 763 aa12.86□□□□□ -0.35
DDX21-201ENST00000354185 WIZO95785 1651 aa12.85□□□□□ -0.35
DDX21-201ENST00000354185 BAZ1BQ9UIG0 1483 aaKnown RBP12.85□□□□□ -0.35
DDX21-201ENST00000354185 SMARCA4P51532 1647 aa12.72□□□□□ -0.37
DDX21-201ENST00000354185 CCDC88BA6NC98 1476 aa12.72□□□□□ -0.37
DDX21-201ENST00000354185 ATAD2BQ9ULI0 1458 aa12.68□□□□□ -0.38
DDX21-201ENST00000354185 CSRNP3Q8WYN3 585 aa12.67□□□□□ -0.38
DDX21-201ENST00000354185 BICRAQ9NZM4 1560 aa12.67□□□□□ -0.38
DDX21-201ENST00000354185 FBLN2P98095 1184 aa12.63□□□□□ -0.39
DDX21-201ENST00000354185 SMARCA2P51531 1590 aa12.63□□□□□ -0.39
DDX21-201ENST00000354185 UNC13AQ9UPW8 1703 aa12.62□□□□□ -0.39
DDX21-201ENST00000354185 TOP2AP11388 1531 aaKnown RBP12.61□□□□□ -0.39
DDX21-201ENST00000354185 ABCC8Q09428 1581 aa12.6□□□□□ -0.39
DDX21-201ENST00000354185 WRNQ14191 1432 aaPredicted RBP eCLIP12.59□□□□□ -0.39
DDX21-201ENST00000354185 EIF4G1Q04637 1599 aaKnown RBP12.58□□□□□ -0.4
DDX21-201ENST00000354185 P3H3Q8IVL6 736 aa12.57□□□□□ -0.4
DDX21-201ENST00000354185 DNAJC5BQ9UF47 199 aa12.53□□□□□ -0.4
DDX21-201ENST00000354185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.53□□□□□ -0.4
DDX21-201ENST00000354185 HNRNPUL2Q1KMD3 747 aaKnown RBP12.53□□□□□ -0.4
DDX21-201ENST00000354185 ITGAEP38570 1179 aa12.51□□□□□ -0.41
DDX21-201ENST00000354185 SOGA1O94964 1423 aa12.49□□□□□ -0.41
DDX21-201ENST00000354185 TRIM26Q12899 539 aaPredicted RBP12.49□□□□□ -0.41
DDX21-201ENST00000354185 ARID3CA6NKF2 412 aa12.47□□□□□ -0.41
DDX21-201ENST00000354185 CADPSQ9ULU8 1353 aa12.43□□□□□ -0.42
DDX21-201ENST00000354185 CCER1Q8TC90 406 aaPredicted RBP12.43□□□□□ -0.42
DDX21-201ENST00000354185 NCAPD3P42695 1498 aa12.43□□□□□ -0.42
DDX21-201ENST00000354185 CC2D2AQ9P2K1 1620 aa12.43□□□□□ -0.42
DDX21-201ENST00000354185 ERCC6Q03468 1493 aa12.41□□□□□ -0.42
DDX21-201ENST00000354185 RUSC2Q8N2Y8 1516 aa12.35□□□□□ -0.43
DDX21-201ENST00000354185 NESP48681 1621 aa12.34□□□□□ -0.43
DDX21-201ENST00000354185 CUX2O14529 1486 aa12.33□□□□□ -0.44
DDX21-201ENST00000354185 KIF27Q86VH2 1401 aa12.33□□□□□ -0.44
DDX21-201ENST00000354185 TDRD9Q8NDG6 1382 aaKnown RBP12.32□□□□□ -0.44
DDX21-201ENST00000354185 PDS5BQ9NTI5 1447 aa12.31□□□□□ -0.44
DDX21-201ENST00000354185 CHMP7Q8WUX9 453 aaPredicted RBP12.3□□□□□ -0.44
DDX21-201ENST00000354185 FANCD2Q9BXW9 1451 aa12.3□□□□□ -0.44
DDX21-201ENST00000354185 FAM50AQ14320 339 aaKnown RBP12.29□□□□□ -0.44
DDX21-201ENST00000354185 CEP162Q5TB80 1403 aa12.27□□□□□ -0.44
DDX21-201ENST00000354185 EEA1Q15075 1411 aa12.27□□□□□ -0.45
DDX21-201ENST00000354185 GOLGA3Q08378 1498 aa12.27□□□□□ -0.45
DDX21-201ENST00000354185 CLIP1P30622 1438 aa12.27□□□□□ -0.45
DDX21-201ENST00000354185 HMGXB3Q12766 1538 aa12.24□□□□□ -0.45
DDX21-201ENST00000354185 CEP164Q9UPV0 1460 aa12.24□□□□□ -0.45
DDX21-201ENST00000354185 CARMIL1Q5VZK9 1371 aa12.22□□□□□ -0.45
DDX21-201ENST00000354185 CFTRP13569 1480 aa12.21□□□□□ -0.45
DDX21-201ENST00000354185 TNIKQ9UKE5 1360 aa12.2□□□□□ -0.46
DDX21-201ENST00000354185 RAD54L2Q9Y4B4 1467 aa12.19□□□□□ -0.46
DDX21-201ENST00000354185 MYT1LQ9UL68 1186 aa12.18□□□□□ -0.46
DDX21-201ENST00000354185 PEG3Q9GZU2 1588 aa12.18□□□□□ -0.46
DDX21-201ENST00000354185 SYNJ1O43426 1573 aa12.17□□□□□ -0.46
DDX21-201ENST00000354185 FGD5Q6ZNL6 1462 aa12.16□□□□□ -0.46
DDX21-201ENST00000354185 HRCP23327 699 aa12.16□□□□□ -0.46
DDX21-201ENST00000354185 RAPGEF2Q9Y4G8 1499 aa12.15□□□□□ -0.46
DDX21-201ENST00000354185 ZNF777Q9ULD5 760 aaPredicted RBP12.12□□□□□ -0.47
DDX21-201ENST00000354185 ZEB1P37275 1124 aaPredicted RBP12.11□□□□□ -0.47
DDX21-201ENST00000354185 CUX1P39880 1505 aa12.09□□□□□ -0.47
DDX21-201ENST00000354185 AQRO60306 1485 aaKnown RBP eCLIP12.06□□□□□ -0.488e-8■■■■□ 26.6
DDX21-201ENST00000354185 IGF1RP08069 1367 aa12.06□□□□□ -0.48
DDX21-201ENST00000354185 TRIM52Q96A61 297 aa12.03□□□□□ -0.48
DDX21-201ENST00000354185 TOPBP1Q92547 1522 aa12.02□□□□□ -0.48
DDX21-201ENST00000354185 MTUS2Q5JR59 1369 aa12.02□□□□□ -0.49
DDX21-201ENST00000354185 CHIC2Q9UKJ5 165 aa12.02□□□□□ -0.49
DDX21-201ENST00000354185 KANK4Q5T7N3 995 aaPredicted RBP12.01□□□□□ -0.49
DDX21-201ENST00000354185 CDK11AQ9UQ88 783 aaPredicted RBP12.01□□□□□ -0.49
DDX21-201ENST00000354185 POLA1P09884 1462 aaPredicted RBP12.01□□□□□ -0.49
DDX21-201ENST00000354185 NEUROD1Q13562 356 aa12□□□□□ -0.49
DDX21-201ENST00000354185 TOP2BQ02880 1626 aa12□□□□□ -0.49
DDX21-201ENST00000354185 GAPVD1Q14C86 1478 aa12□□□□□ -0.49
DDX21-201ENST00000354185 KCNH8Q96L42 1107 aa11.99□□□□□ -0.49
DDX21-201ENST00000354185 FHOD3Q2V2M9 1422 aa11.97□□□□□ -0.49
DDX21-201ENST00000354185 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
DDX21-201ENST00000354185 LAMC3Q9Y6N6 1575 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms