RNA–Protein interactions for RNA: ENST00000262919.9

ATRN-201, Transcript of attractin, humanhuman

APPRIS P4 TSL 5 BASIC

Gene ATRN, Length 8,633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRN-201ENST00000262919 PELP1Q8IZL8 1130 aaKnown RBP30.41■■■□□ 2.46
ATRN-201ENST00000262919 DCAF8L2P0C7V8 631 aa30.28■■■□□ 2.44
ATRN-201ENST00000262919 CCER1Q8TC90 406 aaPredicted RBP28.93■■■□□ 2.22
ATRN-201ENST00000262919 FAM9AQ8IZU1 332 aaPredicted RBP28.88■■■□□ 2.21
ATRN-201ENST00000262919 APLP2Q06481 763 aa28.86■■■□□ 2.21
ATRN-201ENST00000262919 SUPT5HO00267 1087 aaKnown RBP28.84■■■□□ 2.21
ATRN-201ENST00000262919 MYT1Q01538 1121 aa28.69■■■□□ 2.18
ATRN-201ENST00000262919 ERICH6Q7L0X2 663 aa28.59■■■□□ 2.17
ATRN-201ENST00000262919 NISCHQ9Y2I1 1504 aa28.51■■■□□ 2.15
ATRN-201ENST00000262919 CENPBP07199 599 aaPredicted RBP28.42■■■□□ 2.14
ATRN-201ENST00000262919 ZEB1P37275 1124 aaPredicted RBP28.24■■■□□ 2.11
ATRN-201ENST00000262919 SHROOM4Q9ULL8 1493 aa27.93■■■□□ 2.06
ATRN-201ENST00000262919 NEFLP07196 543 aa27.93■■■□□ 2.06
ATRN-201ENST00000262919 YTHDC1Q96MU7 727 aaKnown RBP27.84■■■□□ 2.05
ATRN-201ENST00000262919 EHMT2Q96KQ7 1210 aa27.76■■■□□ 2.03
ATRN-201ENST00000262919 PCGF6Q9BYE7 350 aa27.5■■□□□ 1.99
ATRN-201ENST00000262919 DAXXQ9UER7 740 aaPredicted RBP27.47■■□□□ 1.99
ATRN-201ENST00000262919 TRIM41Q8WV44 630 aa27.1■■□□□ 1.93
ATRN-201ENST00000262919 TTBK1Q5TCY1 1321 aaPredicted RBP27.07■■□□□ 1.92
ATRN-201ENST00000262919 ATP1B4Q9UN42 357 aaPredicted RBP27.03■■□□□ 1.92
ATRN-201ENST00000262919 UBTFP17480 764 aaKnown RBP26.97■■□□□ 1.91
ATRN-201ENST00000262919 RANGAP1P46060 587 aaPredicted RBP26.75■■□□□ 1.87
ATRN-201ENST00000262919 RTL5Q5HYW3 569 aaPredicted RBP26.73■■□□□ 1.87
ATRN-201ENST00000262919 ZNF316A6NFI3 1004 aaPredicted RBP26.68■■□□□ 1.86
ATRN-201ENST00000262919 TRIM26Q12899 539 aaPredicted RBP26.6■■□□□ 1.85
ATRN-201ENST00000262919 CLSPNQ9HAW4 1339 aa26.37■■□□□ 1.81
ATRN-201ENST00000262919 MYT1LQ9UL68 1186 aa26.29■■□□□ 1.8
ATRN-201ENST00000262919 HRCP23327 699 aa26.18■■□□□ 1.78
ATRN-201ENST00000262919 POLR3GLQ9BT43 218 aa26.18■■□□□ 1.78
ATRN-201ENST00000262919 ZBTB47Q9UFB7 747 aaPredicted RBP26.11■■□□□ 1.77
ATRN-201ENST00000262919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.09■■□□□ 1.77
ATRN-201ENST00000262919 HNRNPUL2Q1KMD3 747 aaKnown RBP26.09■■□□□ 1.77
ATRN-201ENST00000262919 SLC4A1APQ9BWU0 796 aaKnown RBP25.99■■□□□ 1.75
ATRN-201ENST00000262919 ITGAEP38570 1179 aa25.89■■□□□ 1.73
ATRN-201ENST00000262919 DIEXFQ68CQ4 756 aaKnown RBP25.85■■□□□ 1.73
ATRN-201ENST00000262919 CDK11AQ9UQ88 783 aaPredicted RBP25.85■■□□□ 1.73
ATRN-201ENST00000262919 ANP32BQ92688 251 aaKnown RBP25.76■■□□□ 1.71
ATRN-201ENST00000262919 NEFMP07197 916 aa25.73■■□□□ 1.71
ATRN-201ENST00000262919 GLIPR1L2Q4G1C9 344 aa25.69■■□□□ 1.7
ATRN-201ENST00000262919 PPARGC1BQ86YN6 1023 aaKnown RBP25.67■■□□□ 1.7
ATRN-201ENST00000262919 ANP32CO43423 234 aa25.66■■□□□ 1.7
ATRN-201ENST00000262919 ANP32AP39687 249 aaKnown RBP25.63■■□□□ 1.69
ATRN-201ENST00000262919 CANXP27824 592 aaKnown RBP25.58■■□□□ 1.69
ATRN-201ENST00000262919 CNGB1Q14028 1251 aaPredicted RBP25.5■■□□□ 1.67
ATRN-201ENST00000262919 CHIC1Q5VXU3 224 aa25.48■■□□□ 1.67
ATRN-201ENST00000262919 FAM50AQ14320 339 aaKnown RBP25.44■■□□□ 1.66
ATRN-201ENST00000262919 TRIM52Q96A61 297 aa25.4■■□□□ 1.66
ATRN-201ENST00000262919 UPF2Q9HAU5 1272 aaKnown RBP25.39■■□□□ 1.66
ATRN-201ENST00000262919 HSP90AA1P07900 732 aaKnown RBP25.31■■□□□ 1.64
ATRN-201ENST00000262919 SLC24A1O60721 1099 aa25.21■■□□□ 1.63
ATRN-201ENST00000262919 GTF3C3Q9Y5Q9 886 aa25.18■■□□□ 1.62
ATRN-201ENST00000262919 NEUROD1Q13562 356 aa25.15■■□□□ 1.62
ATRN-201ENST00000262919 LOC105371045A0A1W2PR82 267 aa25.1■■□□□ 1.61
ATRN-201ENST00000262919 ZNF326Q5BKZ1 582 aaKnown RBP25.06■■□□□ 1.6
ATRN-201ENST00000262919 BCANQ96GW7 911 aa25.03■■□□□ 1.6
ATRN-201ENST00000262919 EIF5BO60841 1220 aaKnown RBP25.02■■□□□ 1.6
ATRN-201ENST00000262919 CDK11BP21127 795 aaKnown RBP25.02■■□□□ 1.6
ATRN-201ENST00000262919 ANP32EQ9BTT0 268 aa24.97■■□□□ 1.59
ATRN-201ENST00000262919 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.94■■□□□ 1.58
ATRN-201ENST00000262919 ACIN1Q9UKV3 1341 aaKnown RBP24.83■■□□□ 1.56
ATRN-201ENST00000262919 TNNT2P45379 298 aaPredicted RBP24.82■■□□□ 1.56
ATRN-201ENST00000262919 ESF1Q9H501 851 aaKnown RBP24.81■■□□□ 1.56
ATRN-201ENST00000262919 BCL11AQ9H165 835 aa24.8■■□□□ 1.56
ATRN-201ENST00000262919 NPM2Q86SE8 214 aaKnown RBP24.79■■□□□ 1.56
ATRN-201ENST00000262919 TONSLQ96HA7 1378 aa24.78■■□□□ 1.56
ATRN-201ENST00000262919 MYH16Q9H6N6 1097 aa24.75■■□□□ 1.55
ATRN-201ENST00000262919 BECN1Q14457 450 aa24.68■■□□□ 1.54
ATRN-201ENST00000262919 GOLGA6L22H0YM25 854 aa24.64■■□□□ 1.54
ATRN-201ENST00000262919 DDRGK1Q96HY6 314 aa24.64■■□□□ 1.53
ATRN-201ENST00000262919 TRIM44Q96DX7 344 aaPredicted RBP24.62■■□□□ 1.53
ATRN-201ENST00000262919 NCLP19338 710 aaKnown RBP24.62■■□□□ 1.53
ATRN-201ENST00000262919 CCDC136Q96JN2 1154 aa24.61■■□□□ 1.53
ATRN-201ENST00000262919 STAG3Q9UJ98 1225 aa24.56■■□□□ 1.52
ATRN-201ENST00000262919 FKBP8Q14318 412 aa24.53■■□□□ 1.52
ATRN-201ENST00000262919 WDR43Q15061 677 aaKnown RBP eCLIP24.53■■□□□ 1.52
ATRN-201ENST00000262919 HNRNPUQ00839 825 aaKnown RBP eCLIP24.53■■□□□ 1.52
ATRN-201ENST00000262919 TMC1Q8TDI8 760 aa24.53■■□□□ 1.52
ATRN-201ENST00000262919 FBLN2P98095 1184 aa24.52■■□□□ 1.52
ATRN-201ENST00000262919 ZRSR1Q15695 479 aaKnown RBP24.51■■□□□ 1.51
ATRN-201ENST00000262919 CASC1Q6TDU7 716 aa24.44■■□□□ 1.5
ATRN-201ENST00000262919 DCAF1Q9Y4B6 1507 aa24.44■■□□□ 1.5
ATRN-201ENST00000262919 GOLGA6L6A8MZA4 724 aa24.36■■□□□ 1.49
ATRN-201ENST00000262919 ERICH6BQ5W0A0 696 aa24.34■■□□□ 1.49
ATRN-201ENST00000262919 ZNF777Q9ULD5 760 aaPredicted RBP24.34■■□□□ 1.49
ATRN-201ENST00000262919 NBR1Q14596 966 aa24.33■■□□□ 1.49
ATRN-201ENST00000262919 NRDCO43847 1150 aa24.32■■□□□ 1.48
ATRN-201ENST00000262919 FAM9BQ8IZU0 186 aa24.29■■□□□ 1.48
ATRN-201ENST00000262919 CSRNP3Q8WYN3 585 aa24.29■■□□□ 1.48
ATRN-201ENST00000262919 NPM1P06748 294 aaKnown RBP eCLIP24.29■■□□□ 1.48
ATRN-201ENST00000262919 CHMP4BQ9H444 224 aaKnown RBP24.27■■□□□ 1.48
ATRN-201ENST00000262919 PTMAP06454 111 aaKnown RBP24.24■■□□□ 1.47
ATRN-201ENST00000262919 ABCC9O60706 1549 aa24.21■■□□□ 1.47
ATRN-201ENST00000262919 CDCA8Q53HL2 280 aa24.19■■□□□ 1.46
ATRN-201ENST00000262919 L1TD1Q5T7N2 865 aaKnown RBP24.19■■□□□ 1.46
ATRN-201ENST00000262919 DNTTIP2Q5QJE6 756 aaKnown RBP24.18■■□□□ 1.46
ATRN-201ENST00000262919 CHGAP10645 457 aaKnown RBP24.18■■□□□ 1.46
ATRN-201ENST00000262919 CCDC180Q9P1Z9 1646 aa24.18■■□□□ 1.46
ATRN-201ENST00000262919 MRS2Q9HD23 443 aa24.18■■□□□ 1.46
ATRN-201ENST00000262919 PPM1GO15355 546 aaPredicted RBP24.17■■□□□ 1.46
ATRN-201ENST00000262919 ARXQ96QS3 562 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms