RNA–Protein interactions for RNA: ENST00000389682.7

TSN-201, Transcript of translin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSN, Length 3,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSN-201ENST00000389682 NISCHQ9Y2I1 1504 aa25.62■■□□□ 1.69
TSN-201ENST00000389682 SHROOM4Q9ULL8 1493 aa22.84■■□□□ 1.25
TSN-201ENST00000389682 SUPT5HO00267 1087 aaKnown RBP22.63■■□□□ 1.21
TSN-201ENST00000389682 DCAF8L2P0C7V8 631 aa22.16■■□□□ 1.14
TSN-201ENST00000389682 CHIC1Q5VXU3 224 aa21.82■■□□□ 1.08
TSN-201ENST00000389682 PCGF6Q9BYE7 350 aa21.77■■□□□ 1.08
TSN-201ENST00000389682 HRCP23327 699 aa21.73■■□□□ 1.07
TSN-201ENST00000389682 MYO15BQ96JP2 1530 aa21.69■■□□□ 1.06
TSN-201ENST00000389682 PPARGC1BQ86YN6 1023 aaKnown RBP21.67■■□□□ 1.06
TSN-201ENST00000389682 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.06
TSN-201ENST00000389682 LOC105371045A0A1W2PR82 267 aa21.46■■□□□ 1.03
TSN-201ENST00000389682 CCDC180Q9P1Z9 1646 aa21.24■□□□□ 0.99
TSN-201ENST00000389682 EHMT2Q96KQ7 1210 aa21.12■□□□□ 0.97
TSN-201ENST00000389682 FAM9AQ8IZU1 332 aaPredicted RBP21.01■□□□□ 0.95
TSN-201ENST00000389682 TRIM26Q12899 539 aaPredicted RBP21■□□□□ 0.95
TSN-201ENST00000389682 DCAF1Q9Y4B6 1507 aa20.93■□□□□ 0.94
TSN-201ENST00000389682 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
TSN-201ENST00000389682 ZEB1P37275 1124 aaPredicted RBP20.58■□□□□ 0.88
TSN-201ENST00000389682 RSF1Q96T23 1441 aaPredicted RBP20.56■□□□□ 0.88
TSN-201ENST00000389682 SCAF1Q9H7N4 1312 aaKnown RBP20.55■□□□□ 0.88
TSN-201ENST00000389682 SCRIBQ14160 1630 aa20.51■□□□□ 0.87
TSN-201ENST00000389682 TTBK1Q5TCY1 1321 aaPredicted RBP20.44■□□□□ 0.86
TSN-201ENST00000389682 ABCC9O60706 1549 aa20.43■□□□□ 0.86
TSN-201ENST00000389682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.36■□□□□ 0.85
TSN-201ENST00000389682 RB1CC1Q8TDY2 1594 aa20.35■□□□□ 0.85
TSN-201ENST00000389682 CCER1Q8TC90 406 aaPredicted RBP20.3■□□□□ 0.84
TSN-201ENST00000389682 PELP1Q8IZL8 1130 aaKnown RBP20.27■□□□□ 0.84
TSN-201ENST00000389682 CECR2Q9BXF3 1484 aa20.21■□□□□ 0.83
TSN-201ENST00000389682 NEUROD1Q13562 356 aa20.12■□□□□ 0.81
TSN-201ENST00000389682 MROH2BQ7Z745 1585 aa20.07■□□□□ 0.8
TSN-201ENST00000389682 ACIN1Q9UKV3 1341 aaKnown RBP20.02■□□□□ 0.79
TSN-201ENST00000389682 DIEXFQ68CQ4 756 aaKnown RBP19.99■□□□□ 0.79
TSN-201ENST00000389682 GTF3C3Q9Y5Q9 886 aa19.99■□□□□ 0.79
TSN-201ENST00000389682 YTHDC1Q96MU7 727 aaKnown RBP19.98■□□□□ 0.79
TSN-201ENST00000389682 WIZO95785 1651 aa19.94■□□□□ 0.78
TSN-201ENST00000389682 UBTFP17480 764 aaKnown RBP19.94■□□□□ 0.78
TSN-201ENST00000389682 CENPBP07199 599 aaPredicted RBP19.84■□□□□ 0.77
TSN-201ENST00000389682 RANGAP1P46060 587 aaPredicted RBP19.79■□□□□ 0.76
TSN-201ENST00000389682 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
TSN-201ENST00000389682 NACADO15069 1562 aa19.77■□□□□ 0.76
TSN-201ENST00000389682 CCDC88BA6NC98 1476 aa19.77■□□□□ 0.75
TSN-201ENST00000389682 HNRNPUL2Q1KMD3 747 aaKnown RBP19.77■□□□□ 0.75
TSN-201ENST00000389682 SOGA1O94964 1423 aa19.73■□□□□ 0.75
TSN-201ENST00000389682 CEP162Q5TB80 1403 aa19.72■□□□□ 0.75
TSN-201ENST00000389682 CSRNP3Q8WYN3 585 aa19.72■□□□□ 0.75
TSN-201ENST00000389682 ZNF316A6NFI3 1004 aaPredicted RBP19.66■□□□□ 0.74
TSN-201ENST00000389682 PABPN1Q86U42 306 aaKnown RBP eCLIP19.63■□□□□ 0.73
TSN-201ENST00000389682 BAZ1AQ9NRL2 1556 aaPredicted RBP19.62■□□□□ 0.73
TSN-201ENST00000389682 RUSC2Q8N2Y8 1516 aa19.62■□□□□ 0.73
TSN-201ENST00000389682 TNIKQ9UKE5 1360 aa19.57■□□□□ 0.72
TSN-201ENST00000389682 MIER1Q8N108 512 aa19.54■□□□□ 0.72
TSN-201ENST00000389682 APLP2Q06481 763 aa19.54■□□□□ 0.72
TSN-201ENST00000389682 WRNQ14191 1432 aaPredicted RBP eCLIP19.54■□□□□ 0.72
TSN-201ENST00000389682 TOP2AP11388 1531 aaKnown RBP19.47■□□□□ 0.71
TSN-201ENST00000389682 EIF4G1Q04637 1599 aaKnown RBP19.46■□□□□ 0.71
TSN-201ENST00000389682 SMARCA2P51531 1590 aa19.42■□□□□ 0.7
TSN-201ENST00000389682 GOLGA3Q08378 1498 aa19.38■□□□□ 0.69
TSN-201ENST00000389682 SMARCA4P51532 1647 aa19.38■□□□□ 0.69
TSN-201ENST00000389682 EEA1Q15075 1411 aa19.35■□□□□ 0.69
TSN-201ENST00000389682 CLIP1P30622 1438 aa19.33■□□□□ 0.68
TSN-201ENST00000389682 MYT1Q01538 1121 aa19.26■□□□□ 0.67
TSN-201ENST00000389682 ITGAEP38570 1179 aa19.23■□□□□ 0.67
TSN-201ENST00000389682 CEP164Q9UPV0 1460 aa19.21■□□□□ 0.67
TSN-201ENST00000389682 RAPGEF2Q9Y4G8 1499 aa19.16■□□□□ 0.66
TSN-201ENST00000389682 VPS8Q8N3P4 1428 aa19.16■□□□□ 0.66
TSN-201ENST00000389682 SYNJ1O43426 1573 aa19.11■□□□□ 0.65
TSN-201ENST00000389682 KANK4Q5T7N3 995 aaPredicted RBP19.11■□□□□ 0.65
TSN-201ENST00000389682 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
TSN-201ENST00000389682 BCANQ96GW7 911 aa19.03■□□□□ 0.64
TSN-201ENST00000389682 SUPT16HQ9Y5B9 1047 aaKnown RBP18.99■□□□□ 0.63
TSN-201ENST00000389682 DHX57Q6P158 1386 aaKnown RBP18.99■□□□□ 0.63
TSN-201ENST00000389682 KIF21BO75037 1637 aa18.98■□□□□ 0.63
TSN-201ENST00000389682 BAZ1BQ9UIG0 1483 aaKnown RBP18.98■□□□□ 0.63
TSN-201ENST00000389682 ATAD2BQ9ULI0 1458 aa18.95■□□□□ 0.62
TSN-201ENST00000389682 ATP1B4Q9UN42 357 aaPredicted RBP18.93■□□□□ 0.62
TSN-201ENST00000389682 KCNH8Q96L42 1107 aa18.93■□□□□ 0.62
TSN-201ENST00000389682 BICRAQ9NZM4 1560 aa18.91■□□□□ 0.62
TSN-201ENST00000389682 CLSPNQ9HAW4 1339 aa18.86■□□□□ 0.61
TSN-201ENST00000389682 TSHZ2Q9NRE2 1034 aa18.84■□□□□ 0.61
TSN-201ENST00000389682 HIRIP3Q9BW71 556 aaPredicted RBP18.83■□□□□ 0.61
TSN-201ENST00000389682 FAM50AQ14320 339 aaKnown RBP18.83■□□□□ 0.6
TSN-201ENST00000389682 DDX10Q13206 875 aaKnown RBP18.82■□□□□ 0.6
TSN-201ENST00000389682 P3H3Q8IVL6 736 aa18.82■□□□□ 0.6
TSN-201ENST00000389682 ARAP1Q96P48 1450 aa18.81■□□□□ 0.6
TSN-201ENST00000389682 SIN3AQ96ST3 1273 aa18.79■□□□□ 0.6
TSN-201ENST00000389682 CCNB3Q8WWL7 1395 aa18.79■□□□□ 0.6
TSN-201ENST00000389682 PEG3Q9GZU2 1588 aa18.76■□□□□ 0.59
TSN-201ENST00000389682 PRXQ9BXM0 1461 aa18.73■□□□□ 0.59
TSN-201ENST00000389682 KIF27Q86VH2 1401 aa18.72■□□□□ 0.59
TSN-201ENST00000389682 RAB3GAP2Q9H2M9 1393 aa18.72■□□□□ 0.59
TSN-201ENST00000389682 TOP2BQ02880 1626 aa18.71■□□□□ 0.59
TSN-201ENST00000389682 FKBP8Q14318 412 aa18.71■□□□□ 0.59
TSN-201ENST00000389682 ANP32EQ9BTT0 268 aa18.67■□□□□ 0.58
TSN-201ENST00000389682 TRIM52Q96A61 297 aa18.67■□□□□ 0.58
TSN-201ENST00000389682 RRBP1Q9P2E9 1410 aaKnown RBP18.67■□□□□ 0.58
TSN-201ENST00000389682 ARHGAP35Q9NRY4 1499 aa18.63■□□□□ 0.57
TSN-201ENST00000389682 ERICH3Q5RHP9 1530 aa18.62■□□□□ 0.57
TSN-201ENST00000389682 CUX1P39880 1505 aa18.61■□□□□ 0.57
TSN-201ENST00000389682 CNGB1Q14028 1251 aaPredicted RBP18.59■□□□□ 0.57
TSN-201ENST00000389682 NEFLP07196 543 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms