RNA–Protein interactions for RNA: ENST00000378551.6

PPM1B-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPM1B, Length 3,877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-204ENST00000378551 NISCHQ9Y2I1 1504 aa28.16■■■□□ 2.1
PPM1B-204ENST00000378551 DCAF8L2P0C7V8 631 aa27.05■■□□□ 1.92
PPM1B-204ENST00000378551 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
PPM1B-204ENST00000378551 SUPT5HO00267 1087 aaKnown RBP26.88■■□□□ 1.89
PPM1B-204ENST00000378551 EHMT2Q96KQ7 1210 aa25.88■■□□□ 1.73
PPM1B-204ENST00000378551 PCGF6Q9BYE7 350 aa25.61■■□□□ 1.69
PPM1B-204ENST00000378551 FAM9AQ8IZU1 332 aaPredicted RBP25.25■■□□□ 1.63
PPM1B-204ENST00000378551 PPARGC1BQ86YN6 1023 aaKnown RBP25.05■■□□□ 1.6
PPM1B-204ENST00000378551 TTBK1Q5TCY1 1321 aaPredicted RBP24.97■■□□□ 1.59
PPM1B-204ENST00000378551 LOC105371045A0A1W2PR82 267 aa24.97■■□□□ 1.59
PPM1B-204ENST00000378551 CHIC1Q5VXU3 224 aa24.86■■□□□ 1.57
PPM1B-204ENST00000378551 HRCP23327 699 aa24.75■■□□□ 1.55
PPM1B-204ENST00000378551 TRIM41Q8WV44 630 aa24.47■■□□□ 1.51
PPM1B-204ENST00000378551 RANGAP1P46060 587 aaPredicted RBP24.25■■□□□ 1.47
PPM1B-204ENST00000378551 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
PPM1B-204ENST00000378551 CCER1Q8TC90 406 aaPredicted RBP24.11■■□□□ 1.45
PPM1B-204ENST00000378551 MYO15BQ96JP2 1530 aa24.11■■□□□ 1.45
PPM1B-204ENST00000378551 YTHDC1Q96MU7 727 aaKnown RBP23.94■■□□□ 1.42
PPM1B-204ENST00000378551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.92■■□□□ 1.42
PPM1B-204ENST00000378551 UBTFP17480 764 aaKnown RBP23.78■■□□□ 1.4
PPM1B-204ENST00000378551 ZEB1P37275 1124 aaPredicted RBP23.77■■□□□ 1.4
PPM1B-204ENST00000378551 APLP2Q06481 763 aa23.57■■□□□ 1.36
PPM1B-204ENST00000378551 ZCCHC6Q5VYS8 1495 aaKnown RBP23.56■■□□□ 1.36
PPM1B-204ENST00000378551 HNRNPUL2Q1KMD3 747 aaKnown RBP23.53■■□□□ 1.36
PPM1B-204ENST00000378551 CENPBP07199 599 aaPredicted RBP23.47■■□□□ 1.35
PPM1B-204ENST00000378551 DIEXFQ68CQ4 756 aaKnown RBP23.32■■□□□ 1.32
PPM1B-204ENST00000378551 ABCC9O60706 1549 aa23.31■■□□□ 1.32
PPM1B-204ENST00000378551 ITGAEP38570 1179 aa23.29■■□□□ 1.32
PPM1B-204ENST00000378551 ATP1B4Q9UN42 357 aaPredicted RBP23.25■■□□□ 1.31
PPM1B-204ENST00000378551 GTF3C3Q9Y5Q9 886 aa23.24■■□□□ 1.31
PPM1B-204ENST00000378551 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
PPM1B-204ENST00000378551 PABPN1Q86U42 306 aaKnown RBP eCLIP23.18■■□□□ 1.3
PPM1B-204ENST00000378551 DCAF1Q9Y4B6 1507 aa23.15■■□□□ 1.3
PPM1B-204ENST00000378551 PELP1Q8IZL8 1130 aaKnown RBP23.1■■□□□ 1.29
PPM1B-204ENST00000378551 SCRIBQ14160 1630 aa23.07■■□□□ 1.28
PPM1B-204ENST00000378551 NEUROD1Q13562 356 aa23.05■■□□□ 1.28
PPM1B-204ENST00000378551 ACIN1Q9UKV3 1341 aaKnown RBP22.95■■□□□ 1.26
PPM1B-204ENST00000378551 RSF1Q96T23 1441 aaPredicted RBP22.84■■□□□ 1.25
PPM1B-204ENST00000378551 CNGB1Q14028 1251 aaPredicted RBP22.75■■□□□ 1.23
PPM1B-204ENST00000378551 BCANQ96GW7 911 aa22.75■■□□□ 1.23
PPM1B-204ENST00000378551 ZNF316A6NFI3 1004 aaPredicted RBP22.73■■□□□ 1.23
PPM1B-204ENST00000378551 CSRNP3Q8WYN3 585 aa22.7■■□□□ 1.22
PPM1B-204ENST00000378551 CCDC180Q9P1Z9 1646 aa22.67■■□□□ 1.22
PPM1B-204ENST00000378551 MIER1Q8N108 512 aa22.61■■□□□ 1.21
PPM1B-204ENST00000378551 CECR2Q9BXF3 1484 aa22.6■■□□□ 1.21
PPM1B-204ENST00000378551 RB1CC1Q8TDY2 1594 aa22.53■■□□□ 1.2
PPM1B-204ENST00000378551 P3H3Q8IVL6 736 aa22.48■■□□□ 1.19
PPM1B-204ENST00000378551 FAM50AQ14320 339 aaKnown RBP22.48■■□□□ 1.19
PPM1B-204ENST00000378551 NEFLP07196 543 aa22.39■■□□□ 1.18
PPM1B-204ENST00000378551 HIRIP3Q9BW71 556 aaPredicted RBP22.39■■□□□ 1.17
PPM1B-204ENST00000378551 POLR3GLQ9BT43 218 aa22.37■■□□□ 1.17
PPM1B-204ENST00000378551 CEP162Q5TB80 1403 aa22.33■■□□□ 1.17
PPM1B-204ENST00000378551 SOGA1O94964 1423 aa22.3■■□□□ 1.16
PPM1B-204ENST00000378551 ARID3CA6NKF2 412 aa22.25■■□□□ 1.15
PPM1B-204ENST00000378551 ERICH6Q7L0X2 663 aa22.25■■□□□ 1.15
PPM1B-204ENST00000378551 MROH2BQ7Z745 1585 aa22.23■■□□□ 1.15
PPM1B-204ENST00000378551 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
PPM1B-204ENST00000378551 DDX10Q13206 875 aaKnown RBP22.18■■□□□ 1.14
PPM1B-204ENST00000378551 CCDC88BA6NC98 1476 aa22.15■■□□□ 1.14
PPM1B-204ENST00000378551 TRIM52Q96A61 297 aa22.12■■□□□ 1.13
PPM1B-204ENST00000378551 CLIP1P30622 1438 aa22.08■■□□□ 1.12
PPM1B-204ENST00000378551 FKBP8Q14318 412 aa22.06■■□□□ 1.12
PPM1B-204ENST00000378551 SENP3-EIF4A1A0A087X0R7 540 aa22.03■■□□□ 1.12
PPM1B-204ENST00000378551 RUSC2Q8N2Y8 1516 aa22.01■■□□□ 1.11
PPM1B-204ENST00000378551 WIZO95785 1651 aa22.01■■□□□ 1.11
PPM1B-204ENST00000378551 IRX6P78412 446 aaPredicted RBP22■■□□□ 1.11
PPM1B-204ENST00000378551 MYT1Q01538 1121 aa21.98■■□□□ 1.11
PPM1B-204ENST00000378551 TNIKQ9UKE5 1360 aa21.93■■□□□ 1.1
PPM1B-204ENST00000378551 ZNF326Q5BKZ1 582 aaKnown RBP21.93■■□□□ 1.1
PPM1B-204ENST00000378551 SIN3AQ96ST3 1273 aa21.91■■□□□ 1.1
PPM1B-204ENST00000378551 KANK4Q5T7N3 995 aaPredicted RBP21.9■■□□□ 1.1
PPM1B-204ENST00000378551 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.1
PPM1B-204ENST00000378551 ANP32CO43423 234 aa21.89■■□□□ 1.09
PPM1B-204ENST00000378551 KCNH8Q96L42 1107 aa21.87■■□□□ 1.09
PPM1B-204ENST00000378551 GOLGA3Q08378 1498 aa21.85■■□□□ 1.09
PPM1B-204ENST00000378551 CHIC2Q9UKJ5 165 aa21.83■■□□□ 1.08
PPM1B-204ENST00000378551 SUPT16HQ9Y5B9 1047 aaKnown RBP21.77■■□□□ 1.08
PPM1B-204ENST00000378551 HNRNPUQ00839 825 aaKnown RBP eCLIP21.76■■□□□ 1.07
PPM1B-204ENST00000378551 FAM9BQ8IZU0 186 aa21.69■■□□□ 1.06
PPM1B-204ENST00000378551 BAZ1AQ9NRL2 1556 aaPredicted RBP21.67■■□□□ 1.06
PPM1B-204ENST00000378551 NACADO15069 1562 aa21.63■■□□□ 1.05
PPM1B-204ENST00000378551 SALL2Q9Y467 1007 aaPredicted RBP21.62■■□□□ 1.05
PPM1B-204ENST00000378551 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
PPM1B-204ENST00000378551 RRP7BPQ9NSQ0 103 aa21.59■■□□□ 1.05
PPM1B-204ENST00000378551 TONSLQ96HA7 1378 aa21.59■■□□□ 1.05
PPM1B-204ENST00000378551 EEA1Q15075 1411 aa21.56■■□□□ 1.04
PPM1B-204ENST00000378551 FBLN2P98095 1184 aa21.55■■□□□ 1.04
PPM1B-204ENST00000378551 ZNF777Q9ULD5 760 aaPredicted RBP21.55■■□□□ 1.04
PPM1B-204ENST00000378551 RAPGEF2Q9Y4G8 1499 aa21.54■■□□□ 1.04
PPM1B-204ENST00000378551 CDK11AQ9UQ88 783 aaPredicted RBP21.54■■□□□ 1.04
PPM1B-204ENST00000378551 VPS8Q8N3P4 1428 aa21.52■■□□□ 1.04
PPM1B-204ENST00000378551 BAZ1BQ9UIG0 1483 aaKnown RBP21.48■■□□□ 1.03
PPM1B-204ENST00000378551 NPM2Q86SE8 214 aaKnown RBP21.43■■□□□ 1.02
PPM1B-204ENST00000378551 CCNB3Q8WWL7 1395 aa21.42■■□□□ 1.02
PPM1B-204ENST00000378551 TSHZ2Q9NRE2 1034 aa21.42■■□□□ 1.02
PPM1B-204ENST00000378551 NBR1Q14596 966 aa21.4■■□□□ 1.02
PPM1B-204ENST00000378551 FOXD1Q16676 465 aa21.38■■□□□ 1.01
PPM1B-204ENST00000378551 MYT1LQ9UL68 1186 aa21.38■■□□□ 1.01
PPM1B-204ENST00000378551 MRS2Q9HD23 443 aa21.37■■□□□ 1.01
PPM1B-204ENST00000378551 DHX57Q6P158 1386 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms