RNA–Protein interactions for RNA: ENST00000553614.5

HNRNPC-207, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-207ENST00000553614 NISCHQ9Y2I1 1504 aa22.93■■□□□ 1.26
HNRNPC-207ENST00000553614 ABCC9O60706 1549 aa20.92■□□□□ 0.94
HNRNPC-207ENST00000553614 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
HNRNPC-207ENST00000553614 DNAJC5BQ9UF47 199 aa19.89■□□□□ 0.77
HNRNPC-207ENST00000553614 RB1CC1Q8TDY2 1594 aa19.76■□□□□ 0.75
HNRNPC-207ENST00000553614 UNC13AQ9UPW8 1703 aa19.62■□□□□ 0.73
HNRNPC-207ENST00000553614 NACADO15069 1562 aa19.58■□□□□ 0.73
HNRNPC-207ENST00000553614 DCAF8L2P0C7V8 631 aa19.51■□□□□ 0.71
HNRNPC-207ENST00000553614 PABPN1Q86U42 306 aaKnown RBP eCLIP19.46■□□□□ 0.71
HNRNPC-207ENST00000553614 BICRAQ9NZM4 1560 aa19.34■□□□□ 0.69
HNRNPC-207ENST00000553614 MYO15BQ96JP2 1530 aa19.22■□□□□ 0.67
HNRNPC-207ENST00000553614 ZCCHC6Q5VYS8 1495 aaKnown RBP18.96■□□□□ 0.63
HNRNPC-207ENST00000553614 CC2D2AQ9P2K1 1620 aa18.93■□□□□ 0.62
HNRNPC-207ENST00000553614 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
HNRNPC-207ENST00000553614 SCRIBQ14160 1630 aa18.9■□□□□ 0.62
HNRNPC-207ENST00000553614 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
HNRNPC-207ENST00000553614 CECR2Q9BXF3 1484 aa18.85■□□□□ 0.61
HNRNPC-207ENST00000553614 EIF4G1Q04637 1599 aaKnown RBP18.8■□□□□ 0.6
HNRNPC-207ENST00000553614 DNAJC5Q9H3Z4 198 aa18.34■□□□□ 0.53
HNRNPC-207ENST00000553614 NCAPD3P42695 1498 aa18.09■□□□□ 0.49
HNRNPC-207ENST00000553614 CUX2O14529 1486 aa18.07■□□□□ 0.48
HNRNPC-207ENST00000553614 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
HNRNPC-207ENST00000553614 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
HNRNPC-207ENST00000553614 SMARCA4P51532 1647 aa17.98■□□□□ 0.47
HNRNPC-207ENST00000553614 NESP48681 1621 aa17.97■□□□□ 0.47
HNRNPC-207ENST00000553614 SMARCA2P51531 1590 aa17.93■□□□□ 0.46
HNRNPC-207ENST00000553614 HMGXB3Q12766 1538 aa17.92■□□□□ 0.46
HNRNPC-207ENST00000553614 THOC2Q8NI27 1593 aaKnown RBP17.85■□□□□ 0.45
HNRNPC-207ENST00000553614 BAZ1BQ9UIG0 1483 aaKnown RBP17.83■□□□□ 0.45
HNRNPC-207ENST00000553614 KIF21AQ7Z4S6 1674 aa17.82■□□□□ 0.44
HNRNPC-207ENST00000553614 BAZ1AQ9NRL2 1556 aaPredicted RBP17.81■□□□□ 0.44
HNRNPC-207ENST00000553614 PEG3Q9GZU2 1588 aa17.76■□□□□ 0.43
HNRNPC-207ENST00000553614 MROH2BQ7Z745 1585 aa17.72■□□□□ 0.43
HNRNPC-207ENST00000553614 LAMC3Q9Y6N6 1575 aa17.7■□□□□ 0.42
HNRNPC-207ENST00000553614 PDS5BQ9NTI5 1447 aa17.63■□□□□ 0.41
HNRNPC-207ENST00000553614 WIZO95785 1651 aa17.56■□□□□ 0.4
HNRNPC-207ENST00000553614 CADPSQ9ULU8 1353 aa17.54■□□□□ 0.4
HNRNPC-207ENST00000553614 MRC2Q9UBG0 1479 aa17.49■□□□□ 0.39
HNRNPC-207ENST00000553614 CHIC1Q5VXU3 224 aa17.48■□□□□ 0.39
HNRNPC-207ENST00000553614 TRIM41Q8WV44 630 aa17.47■□□□□ 0.39
HNRNPC-207ENST00000553614 WDR62O43379 1518 aa17.47■□□□□ 0.39
HNRNPC-207ENST00000553614 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
HNRNPC-207ENST00000553614 FANCD2Q9BXW9 1451 aa17.35■□□□□ 0.37
HNRNPC-207ENST00000553614 CFTRP13569 1480 aa17.3■□□□□ 0.36
HNRNPC-207ENST00000553614 PRDM2Q13029 1718 aa17.27■□□□□ 0.35
HNRNPC-207ENST00000553614 OSCARQ8IYS5 282 aa17.25■□□□□ 0.35
HNRNPC-207ENST00000553614 URB2Q14146 1524 aaKnown RBP17.25■□□□□ 0.35
HNRNPC-207ENST00000553614 RSF1Q96T23 1441 aaPredicted RBP17.24■□□□□ 0.35
HNRNPC-207ENST00000553614 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
HNRNPC-207ENST00000553614 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.34
HNRNPC-207ENST00000553614 RIMBP3CA6NJZ7 1639 aa17.13■□□□□ 0.33
HNRNPC-207ENST00000553614 RIMBP3BA6NNM3 1639 aa17.13■□□□□ 0.33
HNRNPC-207ENST00000553614 RIMBP3Q9UFD9 1639 aa17.13■□□□□ 0.33
HNRNPC-207ENST00000553614 ZNF608Q9ULD9 1512 aaPredicted RBP17.09■□□□□ 0.33
HNRNPC-207ENST00000553614 IFT140Q96RY7 1462 aa17.04■□□□□ 0.32
HNRNPC-207ENST00000553614 CCDC88BA6NC98 1476 aa17.03■□□□□ 0.32
HNRNPC-207ENST00000553614 CHD1O14646 1710 aa17.01■□□□□ 0.31
HNRNPC-207ENST00000553614 EIF4G3O43432 1585 aaKnown RBP17■□□□□ 0.31
HNRNPC-207ENST00000553614 TOPBP1Q92547 1522 aa16.99■□□□□ 0.31
HNRNPC-207ENST00000553614 ARHGEF11O15085 1522 aa16.97■□□□□ 0.31
HNRNPC-207ENST00000553614 TARBP1Q13395 1621 aaKnown RBP16.92■□□□□ 0.3
HNRNPC-207ENST00000553614 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
HNRNPC-207ENST00000553614 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.3
HNRNPC-207ENST00000553614 CYB5RLQ6IPT4 315 aa16.88■□□□□ 0.29
HNRNPC-207ENST00000553614 AQRO60306 1485 aaKnown RBP eCLIP16.87■□□□□ 0.292e-7■■■■□ 26.2
HNRNPC-207ENST00000553614 FBLN2P98095 1184 aa16.83■□□□□ 0.28
HNRNPC-207ENST00000553614 ARAP1Q96P48 1450 aa16.81■□□□□ 0.28
HNRNPC-207ENST00000553614 POLA1P09884 1462 aaPredicted RBP16.8■□□□□ 0.28
HNRNPC-207ENST00000553614 RAD54L2Q9Y4B4 1467 aa16.77■□□□□ 0.28
HNRNPC-207ENST00000553614 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
HNRNPC-207ENST00000553614 TDRD9Q8NDG6 1382 aaKnown RBP16.75■□□□□ 0.27
HNRNPC-207ENST00000553614 SOGA1O94964 1423 aa16.73■□□□□ 0.27
HNRNPC-207ENST00000553614 CLASP1Q7Z460 1538 aa16.69■□□□□ 0.26
HNRNPC-207ENST00000553614 SNAPC4Q5SXM2 1469 aa16.68■□□□□ 0.26
HNRNPC-207ENST00000553614 WDR97A6NE52 1622 aa16.68■□□□□ 0.26
HNRNPC-207ENST00000553614 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
HNRNPC-207ENST00000553614 CUX1P39880 1505 aa16.65■□□□□ 0.26
HNRNPC-207ENST00000553614 CHMP7Q8WUX9 453 aaPredicted RBP16.65■□□□□ 0.26
HNRNPC-207ENST00000553614 PBRM1Q86U86 1689 aa16.65■□□□□ 0.26
HNRNPC-207ENST00000553614 MAGI1Q96QZ7 1491 aaPredicted RBP16.61■□□□□ 0.25
HNRNPC-207ENST00000553614 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
HNRNPC-207ENST00000553614 GRIN2BQ13224 1484 aa16.6■□□□□ 0.25
HNRNPC-207ENST00000553614 SYNJ2O15056 1496 aa16.57■□□□□ 0.24
HNRNPC-207ENST00000553614 ABCA5Q8WWZ7 1642 aa16.52■□□□□ 0.23
HNRNPC-207ENST00000553614 GAPVD1Q14C86 1478 aa16.51■□□□□ 0.23
HNRNPC-207ENST00000553614 ERCC6L2Q5T890 1561 aa16.51■□□□□ 0.23
HNRNPC-207ENST00000553614 ABCA10Q8WWZ4 1543 aa16.46■□□□□ 0.23
HNRNPC-207ENST00000553614 CEP170Q5SW79 1584 aa16.4■□□□□ 0.22
HNRNPC-207ENST00000553614 KIF13AQ9H1H9 1805 aa16.39■□□□□ 0.21
HNRNPC-207ENST00000553614 GRIN2AQ12879 1464 aa16.39■□□□□ 0.21
HNRNPC-207ENST00000553614 ADAMTS12P58397 1594 aa16.38■□□□□ 0.21
HNRNPC-207ENST00000553614 WRNQ14191 1432 aaPredicted RBP eCLIP16.36■□□□□ 0.21
HNRNPC-207ENST00000553614 SUPT5HO00267 1087 aaKnown RBP16.36■□□□□ 0.21
HNRNPC-207ENST00000553614 SHROOM2Q13796 1616 aa16.35■□□□□ 0.21
HNRNPC-207ENST00000553614 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
HNRNPC-207ENST00000553614 NUP160Q12769 1436 aa16.34■□□□□ 0.21
HNRNPC-207ENST00000553614 TOP2BQ02880 1626 aa16.3■□□□□ 0.2
HNRNPC-207ENST00000553614 FHAD1B1AJZ9 1412 aa16.29■□□□□ 0.2
HNRNPC-207ENST00000553614 ERICH3Q5RHP9 1530 aa16.24■□□□□ 0.19
HNRNPC-207ENST00000553614 PRG4Q92954 1404 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms