Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
PCDHGC4Q9Y5F7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PCDHGC4Q9Y5F7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PCDHGC4Q9Y5F7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.2■■■□□ 2.26
PCDHGC4Q9Y5F7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.18■■■□□ 2.26
PCDHGC4Q9Y5F7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.18■■■□□ 2.26
PCDHGC4Q9Y5F7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PCDHGC4Q9Y5F7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.11■■■□□ 2.25
PCDHGC4Q9Y5F7 AP002365.1-201ENST00000603448 772 ntBASIC29.07■■■□□ 2.24
PCDHGC4Q9Y5F7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
PCDHGC4Q9Y5F7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
PCDHGC4Q9Y5F7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
PCDHGC4Q9Y5F7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29■■■□□ 2.23
PCDHGC4Q9Y5F7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29■■■□□ 2.23
PCDHGC4Q9Y5F7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
PCDHGC4Q9Y5F7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
PCDHGC4Q9Y5F7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.98■■■□□ 2.23
PCDHGC4Q9Y5F7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
PCDHGC4Q9Y5F7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28.98■■■□□ 2.23
PCDHGC4Q9Y5F7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
PCDHGC4Q9Y5F7 DYNLL1-208ENST00000550178 581 ntBASIC28.98■■■□□ 2.23
PCDHGC4Q9Y5F7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.97■■■□□ 2.23
PCDHGC4Q9Y5F7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
PCDHGC4Q9Y5F7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.97■■■□□ 2.23
PCDHGC4Q9Y5F7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PCDHGC4Q9Y5F7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
PCDHGC4Q9Y5F7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
PCDHGC4Q9Y5F7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.93■■■□□ 2.22
PCDHGC4Q9Y5F7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
PCDHGC4Q9Y5F7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC28.92■■■□□ 2.22
PCDHGC4Q9Y5F7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PCDHGC4Q9Y5F7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.89■■■□□ 2.22
PCDHGC4Q9Y5F7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.87■■■□□ 2.21
PCDHGC4Q9Y5F7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
PCDHGC4Q9Y5F7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.86■■■□□ 2.21
PCDHGC4Q9Y5F7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
PCDHGC4Q9Y5F7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCDHGC4Q9Y5F7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCDHGC4Q9Y5F7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.81■■■□□ 2.2
PCDHGC4Q9Y5F7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
PCDHGC4Q9Y5F7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PCDHGC4Q9Y5F7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PCDHGC4Q9Y5F7 AL031258.1-201ENST00000623562 325 ntBASIC28.78■■■□□ 2.2
PCDHGC4Q9Y5F7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.74■■■□□ 2.19
PCDHGC4Q9Y5F7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
PCDHGC4Q9Y5F7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
PCDHGC4Q9Y5F7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.71■■■□□ 2.19
PCDHGC4Q9Y5F7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PCDHGC4Q9Y5F7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
PCDHGC4Q9Y5F7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PCDHGC4Q9Y5F7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
PCDHGC4Q9Y5F7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.63■■■□□ 2.17
PCDHGC4Q9Y5F7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHGC4Q9Y5F7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHGC4Q9Y5F7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
PCDHGC4Q9Y5F7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCDHGC4Q9Y5F7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHGC4Q9Y5F7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCDHGC4Q9Y5F7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHGC4Q9Y5F7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHGC4Q9Y5F7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PCDHGC4Q9Y5F7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHGC4Q9Y5F7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHGC4Q9Y5F7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.52■■■□□ 2.16
PCDHGC4Q9Y5F7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.51■■■□□ 2.15
PCDHGC4Q9Y5F7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.5■■■□□ 2.15
PCDHGC4Q9Y5F7 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.5■■■□□ 2.15
PCDHGC4Q9Y5F7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PCDHGC4Q9Y5F7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHGC4Q9Y5F7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
PCDHGC4Q9Y5F7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.45■■■□□ 2.14
PCDHGC4Q9Y5F7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.44■■■□□ 2.14
PCDHGC4Q9Y5F7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.44■■■□□ 2.14
PCDHGC4Q9Y5F7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.44■■■□□ 2.14
PCDHGC4Q9Y5F7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCDHGC4Q9Y5F7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.42■■■□□ 2.14
PCDHGC4Q9Y5F7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHGC4Q9Y5F7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHGC4Q9Y5F7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCDHGC4Q9Y5F7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHGC4Q9Y5F7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.37■■■□□ 2.13
PCDHGC4Q9Y5F7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHGC4Q9Y5F7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDHGC4Q9Y5F7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCDHGC4Q9Y5F7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.33■■■□□ 2.13
PCDHGC4Q9Y5F7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHGC4Q9Y5F7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.28■■■□□ 2.12
PCDHGC4Q9Y5F7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PCDHGC4Q9Y5F7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHGC4Q9Y5F7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHGC4Q9Y5F7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
PCDHGC4Q9Y5F7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
PCDHGC4Q9Y5F7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.22■■■□□ 2.11
PCDHGC4Q9Y5F7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PCDHGC4Q9Y5F7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.19■■■□□ 2.1
PCDHGC4Q9Y5F7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.18■■■□□ 2.1
PCDHGC4Q9Y5F7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.18■■■□□ 2.1
PCDHGC4Q9Y5F7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHGC4Q9Y5F7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.17■■■□□ 2.1
PCDHGC4Q9Y5F7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms