Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
KDM4CQ9H3R0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
KDM4CQ9H3R0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
KDM4CQ9H3R0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
KDM4CQ9H3R0 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
KDM4CQ9H3R0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.71■■■□□ 2.35
KDM4CQ9H3R0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.71■■■□□ 2.35
KDM4CQ9H3R0 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.7■■■□□ 2.34
KDM4CQ9H3R0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
KDM4CQ9H3R0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
KDM4CQ9H3R0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.59■■■□□ 2.33
KDM4CQ9H3R0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
KDM4CQ9H3R0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.58■■■□□ 2.33
KDM4CQ9H3R0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.57■■■□□ 2.32
KDM4CQ9H3R0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.57■■■□□ 2.32
KDM4CQ9H3R0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.56■■■□□ 2.32
KDM4CQ9H3R0 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.54■■■□□ 2.32
KDM4CQ9H3R0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
KDM4CQ9H3R0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
KDM4CQ9H3R0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
KDM4CQ9H3R0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
KDM4CQ9H3R0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.46■■■□□ 2.31
KDM4CQ9H3R0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.45■■■□□ 2.31
KDM4CQ9H3R0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
KDM4CQ9H3R0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
KDM4CQ9H3R0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
KDM4CQ9H3R0 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.41■■■□□ 2.3
KDM4CQ9H3R0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
KDM4CQ9H3R0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
KDM4CQ9H3R0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.39■■■□□ 2.3
KDM4CQ9H3R0 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
KDM4CQ9H3R0 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.38■■■□□ 2.29
KDM4CQ9H3R0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.38■■■□□ 2.29
KDM4CQ9H3R0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
KDM4CQ9H3R0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.36■■■□□ 2.29
KDM4CQ9H3R0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
KDM4CQ9H3R0 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
KDM4CQ9H3R0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.33■■■□□ 2.29
KDM4CQ9H3R0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.29■■■□□ 2.28
KDM4CQ9H3R0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
KDM4CQ9H3R0 DYNLL1-208ENST00000550178 581 ntBASIC29.29■■■□□ 2.28
KDM4CQ9H3R0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
KDM4CQ9H3R0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.26■■■□□ 2.27
KDM4CQ9H3R0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
KDM4CQ9H3R0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
KDM4CQ9H3R0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
KDM4CQ9H3R0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.23■■■□□ 2.27
KDM4CQ9H3R0 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
KDM4CQ9H3R0 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.22■■■□□ 2.27
KDM4CQ9H3R0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
KDM4CQ9H3R0 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
KDM4CQ9H3R0 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
KDM4CQ9H3R0 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.16■■■□□ 2.26
KDM4CQ9H3R0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.16■■■□□ 2.26
KDM4CQ9H3R0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
KDM4CQ9H3R0 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
KDM4CQ9H3R0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
KDM4CQ9H3R0 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
KDM4CQ9H3R0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
KDM4CQ9H3R0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
KDM4CQ9H3R0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
KDM4CQ9H3R0 AL031258.1-201ENST00000623562 325 ntBASIC29.09■■■□□ 2.25
KDM4CQ9H3R0 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
KDM4CQ9H3R0 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.09■■■□□ 2.25
KDM4CQ9H3R0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
KDM4CQ9H3R0 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
KDM4CQ9H3R0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
KDM4CQ9H3R0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.03■■■□□ 2.24
KDM4CQ9H3R0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
KDM4CQ9H3R0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
KDM4CQ9H3R0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.03■■■□□ 2.24
KDM4CQ9H3R0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.02■■■□□ 2.24
KDM4CQ9H3R0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
KDM4CQ9H3R0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
KDM4CQ9H3R0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.01■■■□□ 2.23
KDM4CQ9H3R0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
KDM4CQ9H3R0 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
KDM4CQ9H3R0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
KDM4CQ9H3R0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
KDM4CQ9H3R0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
KDM4CQ9H3R0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.96■■■□□ 2.23
KDM4CQ9H3R0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28.95■■■□□ 2.22
KDM4CQ9H3R0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.94■■■□□ 2.22
KDM4CQ9H3R0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
KDM4CQ9H3R0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
KDM4CQ9H3R0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.89■■■□□ 2.22
KDM4CQ9H3R0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
KDM4CQ9H3R0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
KDM4CQ9H3R0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
KDM4CQ9H3R0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.86■■■□□ 2.21
KDM4CQ9H3R0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.86■■■□□ 2.21
KDM4CQ9H3R0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
KDM4CQ9H3R0 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.85■■■□□ 2.21
KDM4CQ9H3R0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
KDM4CQ9H3R0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
KDM4CQ9H3R0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
KDM4CQ9H3R0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.81■■■□□ 2.2
KDM4CQ9H3R0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
KDM4CQ9H3R0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.8■■■□□ 2.2
KDM4CQ9H3R0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.8■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms