Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NUCKS1Q9H1E3 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
NUCKS1Q9H1E3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
NUCKS1Q9H1E3 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
NUCKS1Q9H1E3 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
NUCKS1Q9H1E3 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
NUCKS1Q9H1E3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.08■■■□□ 2.57
NUCKS1Q9H1E3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
NUCKS1Q9H1E3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
NUCKS1Q9H1E3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.05■■■□□ 2.56
NUCKS1Q9H1E3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.03■■■□□ 2.56
NUCKS1Q9H1E3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.01■■■□□ 2.56
NUCKS1Q9H1E3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
NUCKS1Q9H1E3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
NUCKS1Q9H1E3 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
NUCKS1Q9H1E3 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.94■■■□□ 2.54
NUCKS1Q9H1E3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
NUCKS1Q9H1E3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
NUCKS1Q9H1E3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.9■■■□□ 2.54
NUCKS1Q9H1E3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
NUCKS1Q9H1E3 AC006077.2-201ENST00000623591 457 ntBASIC30.89■■■□□ 2.54
NUCKS1Q9H1E3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
NUCKS1Q9H1E3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
NUCKS1Q9H1E3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
NUCKS1Q9H1E3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
NUCKS1Q9H1E3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
NUCKS1Q9H1E3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.84■■■□□ 2.53
NUCKS1Q9H1E3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
NUCKS1Q9H1E3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
NUCKS1Q9H1E3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
NUCKS1Q9H1E3 ZNRF2P1-201ENST00000441407 443 ntBASIC30.78■■■□□ 2.52
NUCKS1Q9H1E3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.76■■■□□ 2.51
NUCKS1Q9H1E3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
NUCKS1Q9H1E3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
NUCKS1Q9H1E3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
NUCKS1Q9H1E3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
NUCKS1Q9H1E3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
NUCKS1Q9H1E3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
NUCKS1Q9H1E3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
NUCKS1Q9H1E3 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NUCKS1Q9H1E3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NUCKS1Q9H1E3 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NUCKS1Q9H1E3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
NUCKS1Q9H1E3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NUCKS1Q9H1E3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
NUCKS1Q9H1E3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
NUCKS1Q9H1E3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
NUCKS1Q9H1E3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NUCKS1Q9H1E3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
NUCKS1Q9H1E3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
NUCKS1Q9H1E3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.57■■■□□ 2.48
NUCKS1Q9H1E3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
NUCKS1Q9H1E3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
NUCKS1Q9H1E3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
NUCKS1Q9H1E3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
NUCKS1Q9H1E3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
NUCKS1Q9H1E3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
NUCKS1Q9H1E3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.53■■■□□ 2.48
NUCKS1Q9H1E3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
NUCKS1Q9H1E3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.5■■■□□ 2.47
NUCKS1Q9H1E3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
NUCKS1Q9H1E3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
NUCKS1Q9H1E3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
NUCKS1Q9H1E3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.43■■■□□ 2.46
NUCKS1Q9H1E3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.43■■■□□ 2.46
NUCKS1Q9H1E3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
NUCKS1Q9H1E3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NUCKS1Q9H1E3 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
NUCKS1Q9H1E3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
NUCKS1Q9H1E3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
NUCKS1Q9H1E3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.36■■■□□ 2.45
NUCKS1Q9H1E3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
NUCKS1Q9H1E3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
NUCKS1Q9H1E3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NUCKS1Q9H1E3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.34■■■□□ 2.45
NUCKS1Q9H1E3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.34■■■□□ 2.45
NUCKS1Q9H1E3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
NUCKS1Q9H1E3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
NUCKS1Q9H1E3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
NUCKS1Q9H1E3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.33■■■□□ 2.45
NUCKS1Q9H1E3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.32■■■□□ 2.44
NUCKS1Q9H1E3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NUCKS1Q9H1E3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NUCKS1Q9H1E3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.29■■■□□ 2.44
NUCKS1Q9H1E3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.27■■■□□ 2.44
NUCKS1Q9H1E3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.27■■■□□ 2.44
NUCKS1Q9H1E3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
NUCKS1Q9H1E3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
NUCKS1Q9H1E3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
NUCKS1Q9H1E3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NUCKS1Q9H1E3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
NUCKS1Q9H1E3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
NUCKS1Q9H1E3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
NUCKS1Q9H1E3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
NUCKS1Q9H1E3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NUCKS1Q9H1E3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NUCKS1Q9H1E3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.17■■■□□ 2.42
NUCKS1Q9H1E3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NUCKS1Q9H1E3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
NUCKS1Q9H1E3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.12■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms