Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
HMCN1Q96RW7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC9.52□□□□□ -0.88
HMCN1Q96RW7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
HMCN1Q96RW7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
HMCN1Q96RW7 AL162393.1-201ENST00000437852 946 ntBASIC9.52□□□□□ -0.89
HMCN1Q96RW7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
HMCN1Q96RW7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC9.52□□□□□ -0.89
HMCN1Q96RW7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
HMCN1Q96RW7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC9.49□□□□□ -0.89
HMCN1Q96RW7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
HMCN1Q96RW7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC9.48□□□□□ -0.89
HMCN1Q96RW7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC9.47□□□□□ -0.89
HMCN1Q96RW7 AL031258.1-201ENST00000623562 325 ntBASIC9.47□□□□□ -0.89
HMCN1Q96RW7 MIR7108-201ENST00000614319 87 ntBASIC9.46□□□□□ -0.89
HMCN1Q96RW7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC9.46□□□□□ -0.9
HMCN1Q96RW7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC9.44□□□□□ -0.9
HMCN1Q96RW7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC9.44□□□□□ -0.9
HMCN1Q96RW7 ABHD17AP4-201ENST00000411545 909 ntBASIC9.43□□□□□ -0.9
HMCN1Q96RW7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
HMCN1Q96RW7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
HMCN1Q96RW7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
HMCN1Q96RW7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
HMCN1Q96RW7 AP006261.1-201ENST00000584783 668 ntBASIC9.4□□□□□ -0.9
HMCN1Q96RW7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC9.39□□□□□ -0.91
HMCN1Q96RW7 SETD8P1-201ENST00000623146 1180 ntBASIC9.39□□□□□ -0.91
HMCN1Q96RW7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC9.39□□□□□ -0.91
HMCN1Q96RW7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HMCN1Q96RW7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HMCN1Q96RW7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HMCN1Q96RW7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HMCN1Q96RW7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC9.34□□□□□ -0.91
HMCN1Q96RW7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
HMCN1Q96RW7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
HMCN1Q96RW7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC9.33□□□□□ -0.92
HMCN1Q96RW7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC9.32□□□□□ -0.92
HMCN1Q96RW7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HMCN1Q96RW7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
HMCN1Q96RW7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
HMCN1Q96RW7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
HMCN1Q96RW7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC9.3□□□□□ -0.92
HMCN1Q96RW7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC9.29□□□□□ -0.92
HMCN1Q96RW7 HSD17B1P1-201ENST00000590052 955 ntBASIC9.29□□□□□ -0.92
HMCN1Q96RW7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC9.29□□□□□ -0.92
HMCN1Q96RW7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC9.28□□□□□ -0.92
HMCN1Q96RW7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HMCN1Q96RW7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HMCN1Q96RW7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HMCN1Q96RW7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC9.28□□□□□ -0.92
HMCN1Q96RW7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
HMCN1Q96RW7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
HMCN1Q96RW7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
HMCN1Q96RW7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC9.26□□□□□ -0.93
HMCN1Q96RW7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
HMCN1Q96RW7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
HMCN1Q96RW7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC9.25□□□□□ -0.93
HMCN1Q96RW7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC9.25□□□□□ -0.93
HMCN1Q96RW7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC9.25□□□□□ -0.93
HMCN1Q96RW7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HMCN1Q96RW7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC9.24□□□□□ -0.93
HMCN1Q96RW7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
HMCN1Q96RW7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC9.23□□□□□ -0.93
HMCN1Q96RW7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC9.23□□□□□ -0.93
HMCN1Q96RW7 MIR4449-201ENST00000578365 66 ntBASIC9.23□□□□□ -0.93
HMCN1Q96RW7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC9.23□□□□□ -0.93
HMCN1Q96RW7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
HMCN1Q96RW7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC9.22□□□□□ -0.93
HMCN1Q96RW7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC9.22□□□□□ -0.93
HMCN1Q96RW7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC9.21□□□□□ -0.93
HMCN1Q96RW7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
HMCN1Q96RW7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.93
HMCN1Q96RW7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC9.21□□□□□ -0.93
HMCN1Q96RW7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC9.21□□□□□ -0.94
HMCN1Q96RW7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
HMCN1Q96RW7 AL391121.1-201ENST00000607967 1349 ntBASIC9.2□□□□□ -0.94
HMCN1Q96RW7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC9.2□□□□□ -0.94
HMCN1Q96RW7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
HMCN1Q96RW7 CAHM-201ENST00000604200 896 ntBASIC9.19□□□□□ -0.94
HMCN1Q96RW7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HMCN1Q96RW7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC9.19□□□□□ -0.94
HMCN1Q96RW7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
HMCN1Q96RW7 HNRNPLP2-201ENST00000568980 1570 ntBASIC9.19□□□□□ -0.94
HMCN1Q96RW7 MIR3665-201ENST00000578708 105 ntBASIC9.18□□□□□ -0.94
HMCN1Q96RW7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HMCN1Q96RW7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC9.18□□□□□ -0.94
HMCN1Q96RW7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
HMCN1Q96RW7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
HMCN1Q96RW7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC9.17□□□□□ -0.94
HMCN1Q96RW7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC9.17□□□□□ -0.94
HMCN1Q96RW7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC9.16□□□□□ -0.94
HMCN1Q96RW7 AC087741.3-201ENST00000624270 1347 ntBASIC9.15□□□□□ -0.94
HMCN1Q96RW7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC9.14□□□□□ -0.95
HMCN1Q96RW7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HMCN1Q96RW7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC9.14□□□□□ -0.95
HMCN1Q96RW7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
HMCN1Q96RW7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC9.13□□□□□ -0.95
HMCN1Q96RW7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC9.13□□□□□ -0.95
HMCN1Q96RW7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC9.13□□□□□ -0.95
HMCN1Q96RW7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
HMCN1Q96RW7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC9.12□□□□□ -0.95
HMCN1Q96RW7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms