Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
PCDH20Q8N6Y1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
PCDH20Q8N6Y1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
PCDH20Q8N6Y1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.37■■■□□ 2.29
PCDH20Q8N6Y1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.36■■■□□ 2.29
PCDH20Q8N6Y1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.36■■■□□ 2.29
PCDH20Q8N6Y1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCDH20Q8N6Y1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDH20Q8N6Y1 DYNLL1-208ENST00000550178 581 ntBASIC29.33■■■□□ 2.29
PCDH20Q8N6Y1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCDH20Q8N6Y1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCDH20Q8N6Y1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.29■■■□□ 2.28
PCDH20Q8N6Y1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.29■■■□□ 2.28
PCDH20Q8N6Y1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
PCDH20Q8N6Y1 AC145285.7-201ENST00000614819 1539 ntBASIC29.28■■■□□ 2.28
PCDH20Q8N6Y1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCDH20Q8N6Y1 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC29.24■■■□□ 2.27
PCDH20Q8N6Y1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PCDH20Q8N6Y1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.23■■■□□ 2.27
PCDH20Q8N6Y1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDH20Q8N6Y1 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
PCDH20Q8N6Y1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
PCDH20Q8N6Y1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
PCDH20Q8N6Y1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
PCDH20Q8N6Y1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.16■■■□□ 2.26
PCDH20Q8N6Y1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
PCDH20Q8N6Y1 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC29.15■■■□□ 2.26
PCDH20Q8N6Y1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PCDH20Q8N6Y1 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
PCDH20Q8N6Y1 AL031258.1-201ENST00000623562 325 ntBASIC29.12■■■□□ 2.25
PCDH20Q8N6Y1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PCDH20Q8N6Y1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PCDH20Q8N6Y1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
PCDH20Q8N6Y1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.09■■■□□ 2.25
PCDH20Q8N6Y1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
PCDH20Q8N6Y1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
PCDH20Q8N6Y1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
PCDH20Q8N6Y1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
PCDH20Q8N6Y1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
PCDH20Q8N6Y1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
PCDH20Q8N6Y1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
PCDH20Q8N6Y1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.95■■■□□ 2.22
PCDH20Q8N6Y1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
PCDH20Q8N6Y1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.9■■■□□ 2.22
PCDH20Q8N6Y1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
PCDH20Q8N6Y1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.88■■■□□ 2.21
PCDH20Q8N6Y1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
PCDH20Q8N6Y1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.87■■■□□ 2.21
PCDH20Q8N6Y1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.85■■■□□ 2.21
PCDH20Q8N6Y1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.85■■■□□ 2.21
PCDH20Q8N6Y1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.84■■■□□ 2.21
PCDH20Q8N6Y1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.21
PCDH20Q8N6Y1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PCDH20Q8N6Y1 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PCDH20Q8N6Y1 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
PCDH20Q8N6Y1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCDH20Q8N6Y1 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCDH20Q8N6Y1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
PCDH20Q8N6Y1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
PCDH20Q8N6Y1 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.77■■■□□ 2.2
PCDH20Q8N6Y1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PCDH20Q8N6Y1 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PCDH20Q8N6Y1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PCDH20Q8N6Y1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.75■■■□□ 2.19
PCDH20Q8N6Y1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.75■■■□□ 2.19
PCDH20Q8N6Y1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
PCDH20Q8N6Y1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.7■■■□□ 2.18
PCDH20Q8N6Y1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PCDH20Q8N6Y1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PCDH20Q8N6Y1 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PCDH20Q8N6Y1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.17
PCDH20Q8N6Y1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
PCDH20Q8N6Y1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.63■■■□□ 2.17
PCDH20Q8N6Y1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.63■■■□□ 2.17
PCDH20Q8N6Y1 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDH20Q8N6Y1 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCDH20Q8N6Y1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.54■■■□□ 2.16
PCDH20Q8N6Y1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.52■■■□□ 2.16
PCDH20Q8N6Y1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.52■■■□□ 2.16
PCDH20Q8N6Y1 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PCDH20Q8N6Y1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.48■■■□□ 2.15
PCDH20Q8N6Y1 RARRES2P7-201ENST00000567349 469 ntBASIC28.47■■■□□ 2.15
PCDH20Q8N6Y1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.47■■■□□ 2.15
PCDH20Q8N6Y1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDH20Q8N6Y1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDH20Q8N6Y1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
PCDH20Q8N6Y1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.43■■■□□ 2.14
PCDH20Q8N6Y1 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCDH20Q8N6Y1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCDH20Q8N6Y1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.38■■■□□ 2.13
PCDH20Q8N6Y1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PCDH20Q8N6Y1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
PCDH20Q8N6Y1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.36■■■□□ 2.13
PCDH20Q8N6Y1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.35■■■□□ 2.13
PCDH20Q8N6Y1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDH20Q8N6Y1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
PCDH20Q8N6Y1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PCDH20Q8N6Y1 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDH20Q8N6Y1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.29■■■□□ 2.12
PCDH20Q8N6Y1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms