Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCN4BQ8IWT1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.66■■■□□ 2.5
SCN4BQ8IWT1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.65■■■□□ 2.5
SCN4BQ8IWT1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SCN4BQ8IWT1 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SCN4BQ8IWT1 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
SCN4BQ8IWT1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SCN4BQ8IWT1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
SCN4BQ8IWT1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
SCN4BQ8IWT1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
SCN4BQ8IWT1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.51■■■□□ 2.47
SCN4BQ8IWT1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.5■■■□□ 2.47
SCN4BQ8IWT1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
SCN4BQ8IWT1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.48■■■□□ 2.47
SCN4BQ8IWT1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SCN4BQ8IWT1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
SCN4BQ8IWT1 AL031258.1-201ENST00000623562 325 ntBASIC30.47■■■□□ 2.47
SCN4BQ8IWT1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SCN4BQ8IWT1 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.47
SCN4BQ8IWT1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
SCN4BQ8IWT1 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.44■■■□□ 2.46
SCN4BQ8IWT1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SCN4BQ8IWT1 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
SCN4BQ8IWT1 AC145285.7-201ENST00000614819 1539 ntBASIC30.41■■■□□ 2.46
SCN4BQ8IWT1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SCN4BQ8IWT1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SCN4BQ8IWT1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.33■■■□□ 2.45
SCN4BQ8IWT1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SCN4BQ8IWT1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SCN4BQ8IWT1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SCN4BQ8IWT1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
SCN4BQ8IWT1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.25■■■□□ 2.43
SCN4BQ8IWT1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
SCN4BQ8IWT1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.23■■■□□ 2.43
SCN4BQ8IWT1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.23■■■□□ 2.43
SCN4BQ8IWT1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.23■■■□□ 2.43
SCN4BQ8IWT1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.22■■■□□ 2.43
SCN4BQ8IWT1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.21■■■□□ 2.43
SCN4BQ8IWT1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.42
SCN4BQ8IWT1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SCN4BQ8IWT1 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SCN4BQ8IWT1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.17■■■□□ 2.42
SCN4BQ8IWT1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
SCN4BQ8IWT1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SCN4BQ8IWT1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SCN4BQ8IWT1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SCN4BQ8IWT1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.09■■■□□ 2.41
SCN4BQ8IWT1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.09■■■□□ 2.41
SCN4BQ8IWT1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
SCN4BQ8IWT1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
SCN4BQ8IWT1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.02■■■□□ 2.4
SCN4BQ8IWT1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30■■■□□ 2.39
SCN4BQ8IWT1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SCN4BQ8IWT1 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
SCN4BQ8IWT1 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.95■■■□□ 2.39
SCN4BQ8IWT1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SCN4BQ8IWT1 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
SCN4BQ8IWT1 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
SCN4BQ8IWT1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
SCN4BQ8IWT1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.91■■■□□ 2.38
SCN4BQ8IWT1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SCN4BQ8IWT1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SCN4BQ8IWT1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
SCN4BQ8IWT1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.88■■■□□ 2.37
SCN4BQ8IWT1 RARRES2P7-201ENST00000567349 469 ntBASIC29.87■■■□□ 2.37
SCN4BQ8IWT1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SCN4BQ8IWT1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.86■■■□□ 2.37
SCN4BQ8IWT1 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SCN4BQ8IWT1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.85■■■□□ 2.37
SCN4BQ8IWT1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.83■■■□□ 2.37
SCN4BQ8IWT1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.82■■■□□ 2.36
SCN4BQ8IWT1 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SCN4BQ8IWT1 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SCN4BQ8IWT1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SCN4BQ8IWT1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SCN4BQ8IWT1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.76■■■□□ 2.35
SCN4BQ8IWT1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.76■■■□□ 2.35
SCN4BQ8IWT1 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SCN4BQ8IWT1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
SCN4BQ8IWT1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.72■■■□□ 2.35
SCN4BQ8IWT1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.7■■■□□ 2.35
SCN4BQ8IWT1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.69■■■□□ 2.34
SCN4BQ8IWT1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.67■■■□□ 2.34
SCN4BQ8IWT1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.67■■■□□ 2.34
SCN4BQ8IWT1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SCN4BQ8IWT1 SETD8P1-201ENST00000623146 1180 ntBASIC29.65■■■□□ 2.34
SCN4BQ8IWT1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.64■■■□□ 2.34
SCN4BQ8IWT1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SCN4BQ8IWT1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.63■■■□□ 2.33
SCN4BQ8IWT1 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SCN4BQ8IWT1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SCN4BQ8IWT1 AC097358.2-201ENST00000607541 1159 ntBASIC29.57■■■□□ 2.32
SCN4BQ8IWT1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SCN4BQ8IWT1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SCN4BQ8IWT1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.55■■■□□ 2.32
SCN4BQ8IWT1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.53■■■□□ 2.32
SCN4BQ8IWT1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.5■■■□□ 2.31
SCN4BQ8IWT1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.49■■■□□ 2.31
SCN4BQ8IWT1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.49■■■□□ 2.31
SCN4BQ8IWT1 AC136428.2-201ENST00000563187 214 ntBASIC29.47■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms