Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
FOXR1Q6PIV2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
FOXR1Q6PIV2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.84■■■□□ 2.37
FOXR1Q6PIV2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.83■■■□□ 2.37
FOXR1Q6PIV2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.79■■■□□ 2.36
FOXR1Q6PIV2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
FOXR1Q6PIV2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
FOXR1Q6PIV2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.74■■■□□ 2.35
FOXR1Q6PIV2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
FOXR1Q6PIV2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
FOXR1Q6PIV2 ZNRF2P1-201ENST00000441407 443 ntBASIC29.69■■■□□ 2.34
FOXR1Q6PIV2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
FOXR1Q6PIV2 AC006077.2-201ENST00000623591 457 ntBASIC29.68■■■□□ 2.34
FOXR1Q6PIV2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.67■■■□□ 2.34
FOXR1Q6PIV2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
FOXR1Q6PIV2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
FOXR1Q6PIV2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.62■■■□□ 2.33
FOXR1Q6PIV2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.6■■■□□ 2.33
FOXR1Q6PIV2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
FOXR1Q6PIV2 AC015813.7-201ENST00000623294 581 ntBASIC29.57■■■□□ 2.32
FOXR1Q6PIV2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
FOXR1Q6PIV2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
FOXR1Q6PIV2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
FOXR1Q6PIV2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.32
FOXR1Q6PIV2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
FOXR1Q6PIV2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
FOXR1Q6PIV2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
FOXR1Q6PIV2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
FOXR1Q6PIV2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
FOXR1Q6PIV2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
FOXR1Q6PIV2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.44■■■□□ 2.3
FOXR1Q6PIV2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.44■■■□□ 2.3
FOXR1Q6PIV2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
FOXR1Q6PIV2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
FOXR1Q6PIV2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
FOXR1Q6PIV2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
FOXR1Q6PIV2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
FOXR1Q6PIV2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
FOXR1Q6PIV2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
FOXR1Q6PIV2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
FOXR1Q6PIV2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
FOXR1Q6PIV2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
FOXR1Q6PIV2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
FOXR1Q6PIV2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
FOXR1Q6PIV2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
FOXR1Q6PIV2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
FOXR1Q6PIV2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.25■■■□□ 2.27
FOXR1Q6PIV2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
FOXR1Q6PIV2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
FOXR1Q6PIV2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
FOXR1Q6PIV2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
FOXR1Q6PIV2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
FOXR1Q6PIV2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
FOXR1Q6PIV2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.21■■■□□ 2.27
FOXR1Q6PIV2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.2■■■□□ 2.26
FOXR1Q6PIV2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
FOXR1Q6PIV2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
FOXR1Q6PIV2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.18■■■□□ 2.26
FOXR1Q6PIV2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
FOXR1Q6PIV2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.16■■■□□ 2.26
FOXR1Q6PIV2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
FOXR1Q6PIV2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.16■■■□□ 2.26
FOXR1Q6PIV2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
FOXR1Q6PIV2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
FOXR1Q6PIV2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
FOXR1Q6PIV2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
FOXR1Q6PIV2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
FOXR1Q6PIV2 AL161658.1-201ENST00000623641 1967 ntBASIC29.04■■■□□ 2.24
FOXR1Q6PIV2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
FOXR1Q6PIV2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
FOXR1Q6PIV2 AP002365.1-201ENST00000603448 772 ntBASIC28.99■■■□□ 2.23
FOXR1Q6PIV2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC28.97■■■□□ 2.23
FOXR1Q6PIV2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.97■■■□□ 2.23
FOXR1Q6PIV2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
FOXR1Q6PIV2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
FOXR1Q6PIV2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
FOXR1Q6PIV2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
FOXR1Q6PIV2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
FOXR1Q6PIV2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
FOXR1Q6PIV2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
FOXR1Q6PIV2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
FOXR1Q6PIV2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
FOXR1Q6PIV2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
FOXR1Q6PIV2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.85■■■□□ 2.21
FOXR1Q6PIV2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
FOXR1Q6PIV2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
FOXR1Q6PIV2 AC139426.1-201ENST00000568218 2529 ntBASIC28.83■■■□□ 2.21
FOXR1Q6PIV2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
FOXR1Q6PIV2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.82■■■□□ 2.2
FOXR1Q6PIV2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
FOXR1Q6PIV2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
FOXR1Q6PIV2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
FOXR1Q6PIV2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
FOXR1Q6PIV2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
FOXR1Q6PIV2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
FOXR1Q6PIV2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
FOXR1Q6PIV2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.76■■■□□ 2.19
FOXR1Q6PIV2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.76■■■□□ 2.19
FOXR1Q6PIV2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.75■■■□□ 2.19
FOXR1Q6PIV2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms