Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.88■■■□□ 2.85
PPP4R3AQ6IN85 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
PPP4R3AQ6IN85 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.78■■■□□ 2.84
PPP4R3AQ6IN85 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.77■■■□□ 2.84
PPP4R3AQ6IN85 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.75■■■□□ 2.83
PPP4R3AQ6IN85 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
PPP4R3AQ6IN85 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
PPP4R3AQ6IN85 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
PPP4R3AQ6IN85 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.67■■■□□ 2.82
PPP4R3AQ6IN85 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
PPP4R3AQ6IN85 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
PPP4R3AQ6IN85 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
PPP4R3AQ6IN85 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.58■■■□□ 2.81
PPP4R3AQ6IN85 AP002365.1-201ENST00000603448 772 ntBASIC32.58■■■□□ 2.81
PPP4R3AQ6IN85 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
PPP4R3AQ6IN85 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
PPP4R3AQ6IN85 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
PPP4R3AQ6IN85 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
PPP4R3AQ6IN85 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
PPP4R3AQ6IN85 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.55■■■□□ 2.8
PPP4R3AQ6IN85 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.55■■■□□ 2.8
PPP4R3AQ6IN85 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
PPP4R3AQ6IN85 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.51■■■□□ 2.79
PPP4R3AQ6IN85 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.5■■■□□ 2.79
PPP4R3AQ6IN85 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.49■■■□□ 2.79
PPP4R3AQ6IN85 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
PPP4R3AQ6IN85 DYNLL1-208ENST00000550178 581 ntBASIC32.48■■■□□ 2.79
PPP4R3AQ6IN85 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
PPP4R3AQ6IN85 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
PPP4R3AQ6IN85 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
PPP4R3AQ6IN85 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.44■■■□□ 2.78
PPP4R3AQ6IN85 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
PPP4R3AQ6IN85 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
PPP4R3AQ6IN85 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.38■■■□□ 2.77
PPP4R3AQ6IN85 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.37■■■□□ 2.77
PPP4R3AQ6IN85 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
PPP4R3AQ6IN85 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PPP4R3AQ6IN85 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PPP4R3AQ6IN85 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.34■■■□□ 2.77
PPP4R3AQ6IN85 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.31■■■□□ 2.76
PPP4R3AQ6IN85 AL031258.1-201ENST00000623562 325 ntBASIC32.28■■■□□ 2.76
PPP4R3AQ6IN85 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PPP4R3AQ6IN85 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
PPP4R3AQ6IN85 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.21■■■□□ 2.75
PPP4R3AQ6IN85 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
PPP4R3AQ6IN85 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.2■■■□□ 2.75
PPP4R3AQ6IN85 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC32.19■■■□□ 2.74
PPP4R3AQ6IN85 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
PPP4R3AQ6IN85 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PPP4R3AQ6IN85 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.18■■■□□ 2.74
PPP4R3AQ6IN85 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PPP4R3AQ6IN85 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.15■■■□□ 2.74
PPP4R3AQ6IN85 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.14■■■□□ 2.74
PPP4R3AQ6IN85 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.14■■■□□ 2.74
PPP4R3AQ6IN85 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.11■■■□□ 2.73
PPP4R3AQ6IN85 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.09■■■□□ 2.73
PPP4R3AQ6IN85 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
PPP4R3AQ6IN85 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PPP4R3AQ6IN85 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
PPP4R3AQ6IN85 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC32.07■■■□□ 2.72
PPP4R3AQ6IN85 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.06■■■□□ 2.72
PPP4R3AQ6IN85 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PPP4R3AQ6IN85 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.03■■■□□ 2.72
PPP4R3AQ6IN85 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
PPP4R3AQ6IN85 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC32.03■■■□□ 2.72
PPP4R3AQ6IN85 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PPP4R3AQ6IN85 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
PPP4R3AQ6IN85 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PPP4R3AQ6IN85 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
PPP4R3AQ6IN85 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PPP4R3AQ6IN85 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.92■■■□□ 2.7
PPP4R3AQ6IN85 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
PPP4R3AQ6IN85 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PPP4R3AQ6IN85 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PPP4R3AQ6IN85 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PPP4R3AQ6IN85 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PPP4R3AQ6IN85 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PPP4R3AQ6IN85 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.87■■■□□ 2.69
PPP4R3AQ6IN85 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.87■■■□□ 2.69
PPP4R3AQ6IN85 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.85■■■□□ 2.69
PPP4R3AQ6IN85 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.83■■■□□ 2.69
PPP4R3AQ6IN85 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
PPP4R3AQ6IN85 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
PPP4R3AQ6IN85 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PPP4R3AQ6IN85 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PPP4R3AQ6IN85 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
PPP4R3AQ6IN85 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PPP4R3AQ6IN85 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PPP4R3AQ6IN85 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.76■■■□□ 2.67
PPP4R3AQ6IN85 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PPP4R3AQ6IN85 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
PPP4R3AQ6IN85 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.7■■■□□ 2.67
PPP4R3AQ6IN85 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PPP4R3AQ6IN85 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PPP4R3AQ6IN85 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.68■■■□□ 2.66
PPP4R3AQ6IN85 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.67■■■□□ 2.66
PPP4R3AQ6IN85 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.66■■■□□ 2.66
PPP4R3AQ6IN85 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PPP4R3AQ6IN85 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PPP4R3AQ6IN85 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms