Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC35.7■■■■□ 3.31
ATP2B3Q16720 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
ATP2B3Q16720 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC35.68■■■■□ 3.3
ATP2B3Q16720 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC35.67■■■■□ 3.3
ATP2B3Q16720 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC35.64■■■■□ 3.3
ATP2B3Q16720 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
ATP2B3Q16720 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
ATP2B3Q16720 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC35.59■■■■□ 3.29
ATP2B3Q16720 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC35.56■■■■□ 3.28
ATP2B3Q16720 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC35.54■■■■□ 3.28
ATP2B3Q16720 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC35.51■■■■□ 3.27
ATP2B3Q16720 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC35.5■■■■□ 3.27
ATP2B3Q16720 AL031258.1-201ENST00000623562 325 ntBASIC35.5■■■■□ 3.27
ATP2B3Q16720 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC35.49■■■■□ 3.27
ATP2B3Q16720 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
ATP2B3Q16720 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
ATP2B3Q16720 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
ATP2B3Q16720 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC35.46■■■■□ 3.27
ATP2B3Q16720 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC35.44■■■■□ 3.26
ATP2B3Q16720 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC35.44■■■■□ 3.26
ATP2B3Q16720 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC35.43■■■■□ 3.26
ATP2B3Q16720 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
ATP2B3Q16720 AC145285.7-201ENST00000614819 1539 ntBASIC35.39■■■■□ 3.26
ATP2B3Q16720 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC35.39■■■■□ 3.26
ATP2B3Q16720 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
ATP2B3Q16720 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
ATP2B3Q16720 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
ATP2B3Q16720 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
ATP2B3Q16720 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC35.28■■■■□ 3.24
ATP2B3Q16720 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
ATP2B3Q16720 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC35.24■■■■□ 3.23
ATP2B3Q16720 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC35.22■■■■□ 3.23
ATP2B3Q16720 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC35.2■■■■□ 3.22
ATP2B3Q16720 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC35.2■■■■□ 3.22
ATP2B3Q16720 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC35.19■■■■□ 3.22
ATP2B3Q16720 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC35.19■■■■□ 3.22
ATP2B3Q16720 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
ATP2B3Q16720 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC35.16■■■■□ 3.22
ATP2B3Q16720 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC35.14■■■■□ 3.22
ATP2B3Q16720 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC35.13■■■■□ 3.21
ATP2B3Q16720 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
ATP2B3Q16720 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC35.12■■■■□ 3.21
ATP2B3Q16720 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
ATP2B3Q16720 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
ATP2B3Q16720 EBPL-203ENST00000378270 579 ntTSL 2 BASIC35.07■■■■□ 3.2
ATP2B3Q16720 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
ATP2B3Q16720 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC34.98■■■■□ 3.19
ATP2B3Q16720 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC34.97■■■■□ 3.19
ATP2B3Q16720 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC34.96■■■■□ 3.19
ATP2B3Q16720 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC34.95■■■■□ 3.19
ATP2B3Q16720 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC34.91■■■■□ 3.18
ATP2B3Q16720 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
ATP2B3Q16720 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC34.88■■■■□ 3.17
ATP2B3Q16720 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC34.87■■■■□ 3.17
ATP2B3Q16720 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC34.86■■■■□ 3.17
ATP2B3Q16720 MVK-208ENST00000539696 608 ntTSL 5 BASIC34.86■■■■□ 3.17
ATP2B3Q16720 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
ATP2B3Q16720 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
ATP2B3Q16720 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
ATP2B3Q16720 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
ATP2B3Q16720 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
ATP2B3Q16720 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC34.81■■■■□ 3.16
ATP2B3Q16720 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
ATP2B3Q16720 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC34.79■■■■□ 3.16
ATP2B3Q16720 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
ATP2B3Q16720 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC34.77■■■■□ 3.16
ATP2B3Q16720 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC34.76■■■■□ 3.16
ATP2B3Q16720 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC34.76■■■■□ 3.15
ATP2B3Q16720 RARRES2P7-201ENST00000567349 469 ntBASIC34.72■■■■□ 3.15
ATP2B3Q16720 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC34.71■■■■□ 3.15
ATP2B3Q16720 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
ATP2B3Q16720 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC34.7■■■■□ 3.15
ATP2B3Q16720 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC34.7■■■■□ 3.15
ATP2B3Q16720 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
ATP2B3Q16720 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC34.69■■■■□ 3.14
ATP2B3Q16720 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
ATP2B3Q16720 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
ATP2B3Q16720 KLF16-203ENST00000592313 508 ntTSL 3 BASIC34.64■■■■□ 3.14
ATP2B3Q16720 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
ATP2B3Q16720 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC34.59■■■■□ 3.13
ATP2B3Q16720 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC34.54■■■■□ 3.12
ATP2B3Q16720 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC34.54■■■■□ 3.12
ATP2B3Q16720 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC34.53■■■■□ 3.12
ATP2B3Q16720 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC34.53■■■■□ 3.12
ATP2B3Q16720 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
ATP2B3Q16720 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC34.49■■■■□ 3.11
ATP2B3Q16720 SETD8P1-201ENST00000623146 1180 ntBASIC34.49■■■■□ 3.11
ATP2B3Q16720 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC34.48■■■■□ 3.11
ATP2B3Q16720 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
ATP2B3Q16720 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
ATP2B3Q16720 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC34.45■■■■□ 3.11
ATP2B3Q16720 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
ATP2B3Q16720 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
ATP2B3Q16720 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
ATP2B3Q16720 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC34.39■■■■□ 3.1
ATP2B3Q16720 AC097358.2-201ENST00000607541 1159 ntBASIC34.38■■■■□ 3.09
ATP2B3Q16720 AC136428.2-201ENST00000563187 214 ntBASIC34.36■■■■□ 3.09
ATP2B3Q16720 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC34.33■■■■□ 3.09
ATP2B3Q16720 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC34.31■■■■□ 3.08
ATP2B3Q16720 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms