Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 DYNLL1-208ENST00000550178 581 ntBASIC29.96■■■□□ 2.39
TSPAN3O60637 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.38
TSPAN3O60637 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.93■■■□□ 2.38
TSPAN3O60637 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
TSPAN3O60637 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
TSPAN3O60637 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.88■■■□□ 2.37
TSPAN3O60637 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
TSPAN3O60637 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.87■■■□□ 2.37
TSPAN3O60637 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
TSPAN3O60637 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
TSPAN3O60637 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.82■■■□□ 2.36
TSPAN3O60637 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.82■■■□□ 2.36
TSPAN3O60637 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.79■■■□□ 2.36
TSPAN3O60637 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
TSPAN3O60637 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.75■■■□□ 2.35
TSPAN3O60637 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TSPAN3O60637 AL031258.1-201ENST00000623562 325 ntBASIC29.73■■■□□ 2.35
TSPAN3O60637 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TSPAN3O60637 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC29.72■■■□□ 2.35
TSPAN3O60637 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
TSPAN3O60637 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TSPAN3O60637 AC145285.7-201ENST00000614819 1539 ntBASIC29.71■■■□□ 2.35
TSPAN3O60637 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
TSPAN3O60637 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC29.69■■■□□ 2.34
TSPAN3O60637 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
TSPAN3O60637 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
TSPAN3O60637 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
TSPAN3O60637 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.62■■■□□ 2.33
TSPAN3O60637 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
TSPAN3O60637 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
TSPAN3O60637 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
TSPAN3O60637 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
TSPAN3O60637 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.57■■■□□ 2.32
TSPAN3O60637 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.56■■■□□ 2.32
TSPAN3O60637 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
TSPAN3O60637 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
TSPAN3O60637 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
TSPAN3O60637 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
TSPAN3O60637 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.53■■■□□ 2.32
TSPAN3O60637 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.47■■■□□ 2.31
TSPAN3O60637 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.47■■■□□ 2.31
TSPAN3O60637 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
TSPAN3O60637 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
TSPAN3O60637 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.42■■■□□ 2.3
TSPAN3O60637 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.41■■■□□ 2.3
TSPAN3O60637 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
TSPAN3O60637 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
TSPAN3O60637 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.34■■■□□ 2.29
TSPAN3O60637 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
TSPAN3O60637 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
TSPAN3O60637 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
TSPAN3O60637 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.32■■■□□ 2.28
TSPAN3O60637 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.31■■■□□ 2.28
TSPAN3O60637 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.28■■■□□ 2.28
TSPAN3O60637 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
TSPAN3O60637 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
TSPAN3O60637 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
TSPAN3O60637 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.24■■■□□ 2.27
TSPAN3O60637 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.23■■■□□ 2.27
TSPAN3O60637 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.21■■■□□ 2.27
TSPAN3O60637 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
TSPAN3O60637 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
TSPAN3O60637 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
TSPAN3O60637 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
TSPAN3O60637 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.16■■■□□ 2.26
TSPAN3O60637 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
TSPAN3O60637 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.14■■■□□ 2.26
TSPAN3O60637 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
TSPAN3O60637 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
TSPAN3O60637 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.12■■■□□ 2.25
TSPAN3O60637 RARRES2P7-201ENST00000567349 469 ntBASIC29.11■■■□□ 2.25
TSPAN3O60637 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
TSPAN3O60637 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.09■■■□□ 2.25
TSPAN3O60637 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
TSPAN3O60637 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.08■■■□□ 2.25
TSPAN3O60637 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
TSPAN3O60637 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.04■■■□□ 2.24
TSPAN3O60637 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.01■■■□□ 2.23
TSPAN3O60637 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.01■■■□□ 2.23
TSPAN3O60637 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
TSPAN3O60637 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
TSPAN3O60637 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.95■■■□□ 2.22
TSPAN3O60637 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TSPAN3O60637 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
TSPAN3O60637 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.92■■■□□ 2.22
TSPAN3O60637 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
TSPAN3O60637 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.91■■■□□ 2.22
TSPAN3O60637 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
TSPAN3O60637 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.89■■■□□ 2.22
TSPAN3O60637 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.89■■■□□ 2.22
TSPAN3O60637 SETD8P1-201ENST00000623146 1180 ntBASIC28.89■■■□□ 2.22
TSPAN3O60637 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.88■■■□□ 2.21
TSPAN3O60637 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.88■■■□□ 2.21
TSPAN3O60637 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.87■■■□□ 2.21
TSPAN3O60637 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
TSPAN3O60637 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
TSPAN3O60637 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TSPAN3O60637 AC097358.2-201ENST00000607541 1159 ntBASIC28.82■■■□□ 2.2
TSPAN3O60637 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.82■■■□□ 2.2
TSPAN3O60637 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms