Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.63■■■□□ 2.17
TRBV5-4A0A0C4DH59 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
TRBV5-4A0A0C4DH59 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
TRBV5-4A0A0C4DH59 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
TRBV5-4A0A0C4DH59 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
TRBV5-4A0A0C4DH59 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TRBV5-4A0A0C4DH59 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
TRBV5-4A0A0C4DH59 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRBV5-4A0A0C4DH59 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.48■■■□□ 2.15
TRBV5-4A0A0C4DH59 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.48■■■□□ 2.15
TRBV5-4A0A0C4DH59 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
TRBV5-4A0A0C4DH59 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
TRBV5-4A0A0C4DH59 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TRBV5-4A0A0C4DH59 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC28.43■■■□□ 2.14
TRBV5-4A0A0C4DH59 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
TRBV5-4A0A0C4DH59 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28.41■■■□□ 2.14
TRBV5-4A0A0C4DH59 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
TRBV5-4A0A0C4DH59 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.13
TRBV5-4A0A0C4DH59 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRBV5-4A0A0C4DH59 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRBV5-4A0A0C4DH59 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.32■■■□□ 2.12
TRBV5-4A0A0C4DH59 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
TRBV5-4A0A0C4DH59 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.3■■■□□ 2.12
TRBV5-4A0A0C4DH59 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
TRBV5-4A0A0C4DH59 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.28■■■□□ 2.12
TRBV5-4A0A0C4DH59 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRBV5-4A0A0C4DH59 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TRBV5-4A0A0C4DH59 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
TRBV5-4A0A0C4DH59 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.25■■■□□ 2.11
TRBV5-4A0A0C4DH59 AP002365.1-201ENST00000603448 772 ntBASIC28.24■■■□□ 2.11
TRBV5-4A0A0C4DH59 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRBV5-4A0A0C4DH59 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRBV5-4A0A0C4DH59 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRBV5-4A0A0C4DH59 DYNLL1-208ENST00000550178 581 ntBASIC28.21■■■□□ 2.11
TRBV5-4A0A0C4DH59 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRBV5-4A0A0C4DH59 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRBV5-4A0A0C4DH59 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.19■■■□□ 2.1
TRBV5-4A0A0C4DH59 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRBV5-4A0A0C4DH59 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TRBV5-4A0A0C4DH59 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRBV5-4A0A0C4DH59 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRBV5-4A0A0C4DH59 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
TRBV5-4A0A0C4DH59 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.16■■■□□ 2.1
TRBV5-4A0A0C4DH59 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.15■■■□□ 2.1
TRBV5-4A0A0C4DH59 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRBV5-4A0A0C4DH59 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TRBV5-4A0A0C4DH59 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.11■■■□□ 2.09
TRBV5-4A0A0C4DH59 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TRBV5-4A0A0C4DH59 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRBV5-4A0A0C4DH59 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRBV5-4A0A0C4DH59 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRBV5-4A0A0C4DH59 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRBV5-4A0A0C4DH59 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRBV5-4A0A0C4DH59 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.08■■■□□ 2.09
TRBV5-4A0A0C4DH59 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRBV5-4A0A0C4DH59 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
TRBV5-4A0A0C4DH59 AL031258.1-201ENST00000623562 325 ntBASIC28.04■■■□□ 2.08
TRBV5-4A0A0C4DH59 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TRBV5-4A0A0C4DH59 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.02■■■□□ 2.08
TRBV5-4A0A0C4DH59 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.02■■■□□ 2.08
TRBV5-4A0A0C4DH59 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
TRBV5-4A0A0C4DH59 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TRBV5-4A0A0C4DH59 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TRBV5-4A0A0C4DH59 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
TRBV5-4A0A0C4DH59 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.98■■■□□ 2.07
TRBV5-4A0A0C4DH59 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
TRBV5-4A0A0C4DH59 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
TRBV5-4A0A0C4DH59 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
TRBV5-4A0A0C4DH59 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
TRBV5-4A0A0C4DH59 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.94■■■□□ 2.06
TRBV5-4A0A0C4DH59 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.92■■■□□ 2.06
TRBV5-4A0A0C4DH59 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.92■■■□□ 2.06
TRBV5-4A0A0C4DH59 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.9■■■□□ 2.06
TRBV5-4A0A0C4DH59 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
TRBV5-4A0A0C4DH59 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.89■■■□□ 2.06
TRBV5-4A0A0C4DH59 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
TRBV5-4A0A0C4DH59 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.89■■■□□ 2.06
TRBV5-4A0A0C4DH59 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.87■■■□□ 2.05
TRBV5-4A0A0C4DH59 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
TRBV5-4A0A0C4DH59 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
TRBV5-4A0A0C4DH59 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
TRBV5-4A0A0C4DH59 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.82■■■□□ 2.04
TRBV5-4A0A0C4DH59 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
TRBV5-4A0A0C4DH59 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
TRBV5-4A0A0C4DH59 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
TRBV5-4A0A0C4DH59 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
TRBV5-4A0A0C4DH59 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
TRBV5-4A0A0C4DH59 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.76■■■□□ 2.03
TRBV5-4A0A0C4DH59 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TRBV5-4A0A0C4DH59 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC27.7■■■□□ 2.02
TRBV5-4A0A0C4DH59 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.69■■■□□ 2.02
TRBV5-4A0A0C4DH59 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TRBV5-4A0A0C4DH59 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TRBV5-4A0A0C4DH59 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.67■■■□□ 2.02
TRBV5-4A0A0C4DH59 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.67■■■□□ 2.02
TRBV5-4A0A0C4DH59 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TRBV5-4A0A0C4DH59 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
TRBV5-4A0A0C4DH59 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.65■■■□□ 2.02
TRBV5-4A0A0C4DH59 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.64■■■□□ 2.02
TRBV5-4A0A0C4DH59 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms