Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV8-3A0A0A6YYJ7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC20.11■□□□□ 0.81
TRAV8-3A0A0A6YYJ7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.11■□□□□ 0.81
TRAV8-3A0A0A6YYJ7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TRAV8-3A0A0A6YYJ7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TRAV8-3A0A0A6YYJ7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV8-3A0A0A6YYJ7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRAV8-3A0A0A6YYJ7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV8-3A0A0A6YYJ7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV8-3A0A0A6YYJ7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV8-3A0A0A6YYJ7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAV8-3A0A0A6YYJ7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAV8-3A0A0A6YYJ7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAV8-3A0A0A6YYJ7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAV8-3A0A0A6YYJ7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV8-3A0A0A6YYJ7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV8-3A0A0A6YYJ7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAV8-3A0A0A6YYJ7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20■□□□□ 0.79
TRAV8-3A0A0A6YYJ7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV8-3A0A0A6YYJ7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV8-3A0A0A6YYJ7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV8-3A0A0A6YYJ7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV8-3A0A0A6YYJ7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAV8-3A0A0A6YYJ7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV8-3A0A0A6YYJ7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV8-3A0A0A6YYJ7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV8-3A0A0A6YYJ7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV8-3A0A0A6YYJ7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV8-3A0A0A6YYJ7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV8-3A0A0A6YYJ7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV8-3A0A0A6YYJ7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TRAV8-3A0A0A6YYJ7 AC006077.2-201ENST00000623591 457 ntBASIC19.88■□□□□ 0.77
TRAV8-3A0A0A6YYJ7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAV8-3A0A0A6YYJ7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV8-3A0A0A6YYJ7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TRAV8-3A0A0A6YYJ7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TRAV8-3A0A0A6YYJ7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRAV8-3A0A0A6YYJ7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV8-3A0A0A6YYJ7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV8-3A0A0A6YYJ7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV8-3A0A0A6YYJ7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
TRAV8-3A0A0A6YYJ7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
TRAV8-3A0A0A6YYJ7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV8-3A0A0A6YYJ7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV8-3A0A0A6YYJ7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TRAV8-3A0A0A6YYJ7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV8-3A0A0A6YYJ7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV8-3A0A0A6YYJ7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRAV8-3A0A0A6YYJ7 ZNRF2P1-201ENST00000441407 443 ntBASIC19.75■□□□□ 0.75
TRAV8-3A0A0A6YYJ7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV8-3A0A0A6YYJ7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV8-3A0A0A6YYJ7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV8-3A0A0A6YYJ7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV8-3A0A0A6YYJ7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV8-3A0A0A6YYJ7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV8-3A0A0A6YYJ7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRAV8-3A0A0A6YYJ7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV8-3A0A0A6YYJ7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV8-3A0A0A6YYJ7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV8-3A0A0A6YYJ7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
TRAV8-3A0A0A6YYJ7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV8-3A0A0A6YYJ7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAV8-3A0A0A6YYJ7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV8-3A0A0A6YYJ7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV8-3A0A0A6YYJ7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.64■□□□□ 0.74
TRAV8-3A0A0A6YYJ7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV8-3A0A0A6YYJ7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV8-3A0A0A6YYJ7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAV8-3A0A0A6YYJ7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TRAV8-3A0A0A6YYJ7 AC145285.7-201ENST00000614819 1539 ntBASIC19.63■□□□□ 0.73
TRAV8-3A0A0A6YYJ7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV8-3A0A0A6YYJ7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV8-3A0A0A6YYJ7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV8-3A0A0A6YYJ7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV8-3A0A0A6YYJ7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAV8-3A0A0A6YYJ7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV8-3A0A0A6YYJ7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRAV8-3A0A0A6YYJ7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV8-3A0A0A6YYJ7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV8-3A0A0A6YYJ7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV8-3A0A0A6YYJ7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV8-3A0A0A6YYJ7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV8-3A0A0A6YYJ7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV8-3A0A0A6YYJ7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV8-3A0A0A6YYJ7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TRAV8-3A0A0A6YYJ7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRAV8-3A0A0A6YYJ7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV8-3A0A0A6YYJ7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV8-3A0A0A6YYJ7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV8-3A0A0A6YYJ7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAV8-3A0A0A6YYJ7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAV8-3A0A0A6YYJ7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAV8-3A0A0A6YYJ7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TRAV8-3A0A0A6YYJ7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV8-3A0A0A6YYJ7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV8-3A0A0A6YYJ7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV8-3A0A0A6YYJ7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV8-3A0A0A6YYJ7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.46■□□□□ 0.71
TRAV8-3A0A0A6YYJ7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRAV8-3A0A0A6YYJ7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms